FFCP PHASE1:Hg19::chr22:45942994..45943026,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C518|description=CAGE_peak_at_chr22:45942994..45943026,+|id=chr22:45942994..45943026,+|ontology_enrichment_celltype=CL:0000055!9.61e-14!180;CL:0000057!1.04e-10!75;CL:0000499!4.33e-07!27|ontology_enrichment_celltype_v019=CL:0002552;3.38e-08;5!CL:0000135;9.61e-07;3!CL:0000388;9.61e-07;3|ontology_enrichment_celltype_v019_2=CL:0002552,2.94e-08,5;CL:0000057,6.73e-07,76;CL:0000135,9.66e-07,3;CL:0000388,9.66e-07,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003102!1.42e-10!95;UBERON:0000481!2.32e-08!347;UBERON:0000475!1.27e-07!365;UBERON:0001737!2.97e-07!9;UBERON:0004119!4.49e-07!169;UBERON:0000925!4.49e-07!169;UBERON:0006595!4.49e-07!169;UBERON:0001007!5.99e-07!155;UBERON:0001555!5.99e-07!155;UBERON:0007026!5.99e-07!155;UBERON:0000468!8.05e-07!659|ontology_enrichment_uberon_v019=UBERON:0001737;1.47e-10;9!UBERON:0001557;1.47e-10;9!UBERON:0004905;1.45e-07;8!UBERON:0000982;1.45e-07;8!UBERON:0004770;1.45e-07;8!UBERON:0003937;2.03e-07;12!UBERON:0005399;2.03e-07;12!UBERON:0007846;9.61e-07;3!UBERON:0000043;9.61e-07;3!UBERON:0007845;9.61e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0001737,6.73e-11,9;UBERON:0003102,6.21e-09,99;UBERON:0000161,1.05e-08,36;UBERON:0004119,3.60e-08,160;UBERON:0000925,3.60e-08,160;UBERON:0006595,3.60e-08,160;UBERON:0000162,5.77e-08,14;UBERON:0001353,5.77e-08,14;UBERON:0000163,5.77e-08,14;UBERON:0006866,5.77e-08,14;UBERON:0000164,5.77e-08,14;UBERON:0000931,5.77e-08,14;UBERON:0004905,9.65e-08,8;UBERON:0000982,9.65e-08,8;UBERON:0004770,9.65e-08,8;UBERON:0003937,1.46e-07,12;UBERON:0005399,1.46e-07,12;UBERON:0001007,1.66e-07,145;UBERON:0001555,1.66e-07,145;UBERON:0007026,1.66e-07,145;UBERON:0004923,1.85e-07,66;UBERON:0004122,2.65e-07,15;UBERON:0007846,9.66e-07,3;UBERON:0000043,9.66e-07,3;UBERON:0007845,9.66e-07,3|phase1_expression=0.726713517082227,0.642301571672949,0.281908808191942,4.00293193412522,0.446961094427288,1.74467704820074,0,1.26343974685366,4.17897005119742,0.245733936501509,0.697801167972428,0.218441372130172,0,1.98026164736075,0.662794751455832,0,1.80808358407193,0.730310090387373,0.487932798790507,0.246242116153576,2.44800829493104,1.56727360739044,0,0.958120975510189,1.00434111675842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.722878304769133,0,2.60723734129483,0.795285947051099,0.486634870302636,0.567208902984407,0.221729397462564,0.614843499851882,0.654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0.496971951695318,0.25326102332916,0.264818361626438,7.74458876021797,0,0,0,0,0,0,0.163461903113459,1.05950199351452,2.30470369792,0.234321431833797,1.24864030732128,0,2.09228152772521,0.117434498643765,1.13311061057692,0.98315564691574,1.63323337003915,1.10550885580591,2.9964476540972,4.75201142912821,3.21447008062124,0.910161361938026,0,0.505008341862199,1.87677779807946,0,0.877955241761676,0.612975591598039,1.20190447125277,0.113432183160021,0.179389635688862,1.06778694409284,0.847727604638247,1.20036438433761,0.618315175430633,1.28820270022815,0.18611685633159,0,0.68205903612839,0.757301322732344,0.644349290496095,9.69876340912871,0,0.10075209822764,1.3564847384839,0.386521706326594,0,0,0.609868530647977,0.530119073285941,0.929551542956147,0.310983165046111,1.7662459561294,0.36497735907583,1.56449532329816,7.07565032012174,0,13.4666699129274,14.4375896333917,2.60274960087657,3.03452442140583,1.92808823906786,2.75734931830985,2.61455332910887,0.949082476444386,2.69662616320329,2.74710051175484,1.53898862778556,0,0,0,5.88034845542168,0,0,0.590789906681404,0,2.21379189377604,0.686271241194102,0.109750285408626,0,0.100528972411631,0,1.95484983186195,0,1.44331342025273,1.15930404975077,1.05667824812239,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0.766765358330422,0,0,0,0,0,0,0,0,0,0.822619941626588,0.901029173531752,0.571652865261156,0.672786506072164,1.30788020649984,0.8800594298514,0,0,0.845302752556,1.06375246633948,0,0.771622122786426,0,0,0.57191197463259,2.71310802695722,0,0.325736184293735,0.710783897485092,0,0,0,0,0,0,0,0.479249710983165,1.14861935834114,0,0.144781306667579,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,3.43536176813592,4.00136416847742,2.71265023699736,3.74347550755453,5.35286966391485,2.83864347061082,2.92853537481783,0.601892199455438,2.27407504055985,2.0694614258501,1.32845119707087,0.184369168541703,2.78027566297865,3.72022199179207,4.80400793335198,0,0,0,0,1.66435439510497,1.81434175997808,0.744323423456331,0,0.280660094433074,0,1.02341449813341,0.160853921143607,4.4525419933497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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C518 | |||
|description=CAGE_peak_at_chr22:45942994..45943026,+ | |||
|id=chr22:45942994..45943026,+ | |||
|ontology_enrichment_celltype=CL:0000055!9.61e-14!180;CL:0000057!1.04e-10!75;CL:0000499!4.33e-07!27 | |||
|ontology_enrichment_celltype_v019=CL:0002552;3.38e-08;5!CL:0000135;9.61e-07;3!CL:0000388;9.61e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002552,2.94e-08,5;CL:0000057,6.73e-07,76;CL:0000135,9.66e-07,3;CL:0000388,9.66e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!1.42e-10!95;UBERON:0000481!2.32e-08!347;UBERON:0000475!1.27e-07!365;UBERON:0001737!2.97e-07!9;UBERON:0004119!4.49e-07!169;UBERON:0000925!4.49e-07!169;UBERON:0006595!4.49e-07!169;UBERON:0001007!5.99e-07!155;UBERON:0001555!5.99e-07!155;UBERON:0007026!5.99e-07!155;UBERON:0000468!8.05e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.47e-10;9!UBERON:0001557;1.47e-10;9!UBERON:0004905;1.45e-07;8!UBERON:0000982;1.45e-07;8!UBERON:0004770;1.45e-07;8!UBERON:0003937;2.03e-07;12!UBERON:0005399;2.03e-07;12!UBERON:0007846;9.61e-07;3!UBERON:0000043;9.61e-07;3!UBERON:0007845;9.61e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,6.73e-11,9;UBERON:0003102,6.21e-09,99;UBERON:0000161,1.05e-08,36;UBERON:0004119,3.60e-08,160;UBERON:0000925,3.60e-08,160;UBERON:0006595,3.60e-08,160;UBERON:0000162,5.77e-08,14;UBERON:0001353,5.77e-08,14;UBERON:0000163,5.77e-08,14;UBERON:0006866,5.77e-08,14;UBERON:0000164,5.77e-08,14;UBERON:0000931,5.77e-08,14;UBERON:0004905,9.65e-08,8;UBERON:0000982,9.65e-08,8;UBERON:0004770,9.65e-08,8;UBERON:0003937,1.46e-07,12;UBERON:0005399,1.46e-07,12;UBERON:0001007,1.66e-07,145;UBERON:0001555,1.66e-07,145;UBERON:0007026,1.66e-07,145;UBERON:0004923,1.85e-07,66;UBERON:0004122,2.65e-07,15;UBERON:0007846,9.66e-07,3;UBERON:0000043,9.66e-07,3;UBERON:0007845,9.66e-07,3 | |||
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| |||
|short_description=p@chr22:45942994..45943026,+ | |||
}} |
Revision as of 12:22, 12 September 2013
Short description: | p@chr22:45942994..45943026, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr22:45942994..45943026, + |
Coexpression cluster: | C518_sacrococcigeal_Prostate_Mesenchymal_Fibroblast_tridermal_Hair_placenta |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of gingiva | 2.94e-08 | 5 |
fibroblast | 6.73e-07 | 76 |
fibrocyte | 9.66e-07 | 3 |
tendon cell | 9.66e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
larynx | 6.73e-11 | 9 |
surface structure | 6.21e-09 | 99 |
orifice | 1.05e-08 | 36 |
endoderm-derived structure | 3.60e-08 | 160 |
endoderm | 3.60e-08 | 160 |
presumptive endoderm | 3.60e-08 | 160 |
cloaca | 5.77e-08 | 14 |
anal region | 5.77e-08 | 14 |
embryonic cloaca | 5.77e-08 | 14 |
terminal part of digestive tract | 5.77e-08 | 14 |
primitive urogenital sinus | 5.77e-08 | 14 |
proctodeum | 5.77e-08 | 14 |
articulation | 9.65e-08 | 8 |
skeletal joint | 9.65e-08 | 8 |
articular system | 9.65e-08 | 8 |
sex gland | 1.46e-07 | 12 |
male reproductive gland | 1.46e-07 | 12 |
digestive system | 1.66e-07 | 145 |
digestive tract | 1.66e-07 | 145 |
primitive gut | 1.66e-07 | 145 |
organ component layer | 1.85e-07 | 66 |
genitourinary system | 2.65e-07 | 15 |
dense regular connective tissue | 9.66e-07 | 3 |
tendon | 9.66e-07 | 3 |
regular connective tissue | 9.66e-07 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.