FFCP PHASE1:Hg19::chr22:37505724..37505729,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=164656|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=16517|TSSclassifier=W|UniProt=|association_with_transcript=-121bp_to_ENST00000406856,uc003aqt.1_5end|coexpression_cluster_id=C783|description=CAGE_peak_4_at_TMPRSS6_5end|id=chr22:37505724..37505729,-|ontology_enrichment_celltype=CL:0000181!1.35e-27!12;CL:0000417!1.35e-27!12;CL:0000668!1.35e-27!12;CL:0000414!1.35e-27!12;CL:0000412!1.35e-27!12;CL:0000182!1.35e-27!12;CL:0000167!1.84e-14!1;CL:0000164!1.84e-14!1;CL:0000502!1.84e-14!1;CL:0000172!1.84e-14!1;CL:0000173!1.84e-14!1;CL:0002351!1.84e-14!1;CL:0002535!3.82e-08!2|ontology_enrichment_celltype_v019=CL:0002535;6.48e-18;2|ontology_enrichment_celltype_v019_2=CL:0002535,6.48e-18,2|ontology_enrichment_development_v019=UBERON:0004161;6.11e-13;11!UBERON:0009497;4.15e-11;13|ontology_enrichment_disease=DOID:4430!1.84e-14!1;DOID:4929!8.60e-08!2|ontology_enrichment_disease_v019=DOID:4362;5.73e-08;5|ontology_enrichment_disease_v019_2=DOID:4362,5.73e-08,5|ontology_enrichment_uberon=UBERON:0008835!9.90e-38!22;UBERON:0003894!9.90e-38!22;UBERON:0009854!4.57e-36!23;UBERON:0002107!9.71e-34!19;UBERON:0006925!9.71e-34!19;UBERON:0008836!9.71e-34!19;UBERON:0007499!3.89e-33!25;UBERON:0009497!3.89e-33!25;UBERON:0000015!3.89e-33!25;UBERON:0002423!3.89e-33!25;UBERON:0006235!3.89e-33!25;UBERON:0004161!3.89e-33!25;UBERON:0009856!7.71e-32!26;UBERON:0005057!1.49e-24!26;UBERON:0002368!1.61e-23!35;UBERON:0002365!1.60e-20!31;UBERON:0002330!1.60e-20!31;UBERON:0000949!3.81e-18!45;UBERON:0005911!5.12e-15!82;UBERON:0003929!5.49e-15!54;UBERON:0004913!2.75e-14!1;UBERON:0003703!2.75e-14!1;UBERON:0001174!2.75e-14!1;UBERON:0004914!2.75e-14!1;UBERON:0002530!1.14e-13!59;UBERON:0001041!2.20e-12!98;UBERON:0005172!2.39e-11!55;UBERON:0005173!2.39e-11!55;UBERON:0002417!3.55e-10!61;UBERON:0000916!3.55e-10!61;UBERON:0000466!2.25e-09!126;UBERON:0005177!4.37e-09!107;UBERON:0000077!4.76e-09!130;UBERON:0004921!4.76e-09!129;UBERON:0004185!4.76e-09!129;UBERON:0009569!1.50e-08!113;UBERON:0006955!3.82e-08!2;UBERON:0004801!3.82e-08!2;UBERON:0000007!7.52e-08!2;UBERON:0001007!2.44e-07!155;UBERON:0001555!2.44e-07!155;UBERON:0007026!2.44e-07!155;UBERON:0000025!6.69e-07!194;UBERON:0001048!1.00e-06!168|ontology_enrichment_uberon_v019=UBERON:0006955;6.48e-18;2!UBERON:0004801;6.48e-18;2!UBERON:0002107;2.27e-16;19!UBERON:0006925;2.27e-16;19!UBERON:0002423;1.23e-12;25!UBERON:0002365;3.94e-10;31!UBERON:0002330;3.94e-10;31!UBERON:0002368;1.54e-08;33!UBERON:0000002;7.58e-07;6!UBERON:0001560;7.58e-07;6|ontology_enrichment_uberon_v019_2=UBERON:0006955,6.48e-18,2;UBERON:0004801,6.48e-18,2;UBERON:0002107,2.16e-16,19;UBERON:0006925,2.16e-16,19;UBERON:0008836,2.16e-16,19;UBERON:0008835,2.85e-14,22;UBERON:0003894,2.85e-14,22;UBERON:0009854,1.10e-13,23;UBERON:0007499,1.18e-12,25;UBERON:0009497,1.18e-12,25;UBERON:0000015,1.18e-12,25;UBERON:0002423,1.18e-12,25;UBERON:0006235,1.18e-12,25;UBERON:0004161,1.18e-12,25;UBERON:0009856,3.38e-12,26;UBERON:0002365,2.36e-10,31;UBERON:0002330,2.36e-10,31;UBERON:0002368,2.97e-09,35;UBERON:0000949,2.38e-07,45;UBERON:0000002,7.58e-07,6;UBERON:0001560,7.58e-07,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.60530208930985,0.982827216677626,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.67906630284078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.54188262097304,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.2983186963569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157566364614447,0,0.26961417541674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.93104467356165,1.32506888912221,0,0,0,0,0.106787412567695,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=164656 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16517 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=-121bp_to_ENST00000406856,uc003aqt.1_5end | |||
|coexpression_cluster_id=C783 | |||
|description=CAGE_peak_4_at_TMPRSS6_5end | |||
|id=chr22:37505724..37505729,- | |||
|ontology_enrichment_celltype=CL:0000181!1.35e-27!12;CL:0000417!1.35e-27!12;CL:0000668!1.35e-27!12;CL:0000414!1.35e-27!12;CL:0000412!1.35e-27!12;CL:0000182!1.35e-27!12;CL:0000167!1.84e-14!1;CL:0000164!1.84e-14!1;CL:0000502!1.84e-14!1;CL:0000172!1.84e-14!1;CL:0000173!1.84e-14!1;CL:0002351!1.84e-14!1;CL:0002535!3.82e-08!2 | |||
|ontology_enrichment_celltype_v019=CL:0002535;6.48e-18;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,6.48e-18,2 | |||
|ontology_enrichment_development_v019=UBERON:0004161;6.11e-13;11!UBERON:0009497;4.15e-11;13 | |||
|ontology_enrichment_disease=DOID:4430!1.84e-14!1;DOID:4929!8.60e-08!2 | |||
|ontology_enrichment_disease_v019=DOID:4362;5.73e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,5.73e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0008835!9.90e-38!22;UBERON:0003894!9.90e-38!22;UBERON:0009854!4.57e-36!23;UBERON:0002107!9.71e-34!19;UBERON:0006925!9.71e-34!19;UBERON:0008836!9.71e-34!19;UBERON:0007499!3.89e-33!25;UBERON:0009497!3.89e-33!25;UBERON:0000015!3.89e-33!25;UBERON:0002423!3.89e-33!25;UBERON:0006235!3.89e-33!25;UBERON:0004161!3.89e-33!25;UBERON:0009856!7.71e-32!26;UBERON:0005057!1.49e-24!26;UBERON:0002368!1.61e-23!35;UBERON:0002365!1.60e-20!31;UBERON:0002330!1.60e-20!31;UBERON:0000949!3.81e-18!45;UBERON:0005911!5.12e-15!82;UBERON:0003929!5.49e-15!54;UBERON:0004913!2.75e-14!1;UBERON:0003703!2.75e-14!1;UBERON:0001174!2.75e-14!1;UBERON:0004914!2.75e-14!1;UBERON:0002530!1.14e-13!59;UBERON:0001041!2.20e-12!98;UBERON:0005172!2.39e-11!55;UBERON:0005173!2.39e-11!55;UBERON:0002417!3.55e-10!61;UBERON:0000916!3.55e-10!61;UBERON:0000466!2.25e-09!126;UBERON:0005177!4.37e-09!107;UBERON:0000077!4.76e-09!130;UBERON:0004921!4.76e-09!129;UBERON:0004185!4.76e-09!129;UBERON:0009569!1.50e-08!113;UBERON:0006955!3.82e-08!2;UBERON:0004801!3.82e-08!2;UBERON:0000007!7.52e-08!2;UBERON:0001007!2.44e-07!155;UBERON:0001555!2.44e-07!155;UBERON:0007026!2.44e-07!155;UBERON:0000025!6.69e-07!194;UBERON:0001048!1.00e-06!168 | |||
|ontology_enrichment_uberon_v019=UBERON:0006955;6.48e-18;2!UBERON:0004801;6.48e-18;2!UBERON:0002107;2.27e-16;19!UBERON:0006925;2.27e-16;19!UBERON:0002423;1.23e-12;25!UBERON:0002365;3.94e-10;31!UBERON:0002330;3.94e-10;31!UBERON:0002368;1.54e-08;33!UBERON:0000002;7.58e-07;6!UBERON:0001560;7.58e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,6.48e-18,2;UBERON:0004801,6.48e-18,2;UBERON:0002107,2.16e-16,19;UBERON:0006925,2.16e-16,19;UBERON:0008836,2.16e-16,19;UBERON:0008835,2.85e-14,22;UBERON:0003894,2.85e-14,22;UBERON:0009854,1.10e-13,23;UBERON:0007499,1.18e-12,25;UBERON:0009497,1.18e-12,25;UBERON:0000015,1.18e-12,25;UBERON:0002423,1.18e-12,25;UBERON:0006235,1.18e-12,25;UBERON:0004161,1.18e-12,25;UBERON:0009856,3.38e-12,26;UBERON:0002365,2.36e-10,31;UBERON:0002330,2.36e-10,31;UBERON:0002368,2.97e-09,35;UBERON:0000949,2.38e-07,45;UBERON:0000002,7.58e-07,6;UBERON:0001560,7.58e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.60530208930985,0.982827216677626,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.67906630284078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.54188262097304,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.2983186963569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157566364614447,0,0.26961417541674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.93104467356165,1.32506888912221,0,0,0,0,0.106787412567695,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235676547101626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@TMPRSS6 | |||
}} |
Revision as of 11:49, 12 September 2013
Short description: | p4@TMPRSS6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_TMPRSS6_5end |
Coexpression cluster: | C783_argyrophil_Hepatocyte_liver_gastrointestinal_hepatocellular_adenocarcinoma_Intestinal |
Association with transcript: | -121bp_to_ENST00000406856, uc003aqt.1_5end |
EntrezGene: | TMPRSS6 |
HGNC: | 16517 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 6.48e-18 | 2 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 6.48e-18 | 2 |
cervix epithelium | 6.48e-18 | 2 |
liver | 2.16e-16 | 19 |
digestive gland | 2.16e-16 | 19 |
liver bud | 2.16e-16 | 19 |
hepatic diverticulum | 2.85e-14 | 22 |
liver primordium | 2.85e-14 | 22 |
digestive tract diverticulum | 1.10e-13 | 23 |
epithelial sac | 1.18e-12 | 25 |
epithelium of foregut-midgut junction | 1.18e-12 | 25 |
anatomical boundary | 1.18e-12 | 25 |
hepatobiliary system | 1.18e-12 | 25 |
foregut-midgut junction | 1.18e-12 | 25 |
septum transversum | 1.18e-12 | 25 |
sac | 3.38e-12 | 26 |
exocrine gland | 2.36e-10 | 31 |
exocrine system | 2.36e-10 | 31 |
endocrine gland | 2.97e-09 | 35 |
endocrine system | 2.38e-07 | 45 |
uterine cervix | 7.58e-07 | 6 |
neck of organ | 7.58e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 5.73e-08 | 5 |
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