FFCP PHASE1:Hg19::chr22:33257962..33257975,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7078|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=11822|TSSclassifier=N|UniProt=|association_with_transcript=382bp_to_AF035289_5end|coexpression_cluster_id=C50|description=CAGE_peak_19_at_TIMP3_5end|id=chr22:33257962..33257975,+|ontology_enrichment_celltype=CL:0000057!7.66e-11!75;CL:0002334!7.85e-10!12;CL:0000055!8.50e-08!180|ontology_enrichment_celltype_v019=CL:0002541;3.38e-14;3!CL:0002334;7.20e-12;12!CL:0002593;1.84e-09;2!CL:0000723;2.09e-08;61!CL:0002595;4.82e-08;5!CL:0000134;7.00e-07;55|ontology_enrichment_celltype_v019_2=CL:0002541,3.26e-14,3;CL:0002334,6.83e-12,12;CL:0002593,1.89e-09,2;CL:0002595,5.33e-08,5|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:2394;1.95e-07;14|ontology_enrichment_disease_v019_2=DOID:2394,2.05e-07,14|ontology_enrichment_uberon=UBERON:0004923!6.79e-09!57;UBERON:0007023!4.89e-07!115|ontology_enrichment_uberon_v019=UBERON:0003124;3.38e-14;3!UBERON:0000920;3.38e-14;3!UBERON:0004457;3.26e-11;9!UBERON:0000042;3.26e-11;9!UBERON:0005631;4.98e-11;10!UBERON:0000158;4.98e-11;10!UBERON:0002456;1.84e-09;2!UBERON:0005406;2.47e-09;2!UBERON:0003834;4.82e-08;5!UBERON:0001533;4.82e-08;5!UBERON:0003688;9.10e-07;6!UBERON:0002358;9.10e-07;6!UBERON:0003684;9.10e-07;6!UBERON:0001178;9.10e-07;6|ontology_enrichment_uberon_v019_2=UBERON:0000920,3.26e-14,3;UBERON:0005631,8.34e-11,14;UBERON:0000158,8.34e-11,14;UBERON:0003124,2.64e-10,7;UBERON:0005406,1.66e-09,2;UBERON:0004923,1.75e-09,66;UBERON:0002456,1.89e-09,2;UBERON:0004457,2.83e-08,12;UBERON:0000042,2.83e-08,12;UBERON:0003834,5.33e-08,5;UBERON:0001533,5.33e-08,5|phase1_expression=0.363356758541113,1.49870366723688,0.704772020479856,1.0007329835313,0,1.74467704820074,0,0,0,0.245733936501509,0,0.218441372130172,0.263766978228454,0,0,0,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.434539556882471,0,1.94653948121054,0.0945348171640679,0,0.087834785693126,0.0654895377488563,0.364295288292542,0,0,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0.66944122552934,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,1.98788780678127,0.379891534993739,0.132409180813219,0.573673241497627,0.354668382198357,0,0,0,0,0,0,0.151357427644931,0,0.234321431833797,0,0,0.298897361103602,0,0,0,0,0.368502951935304,0.206651562351531,0,0.741800787835671,0,0,0,0,0,0,0.919463387397059,0,0,0,0.640672166455702,1.48352330811693,1.20036438433761,0.309157587715317,0.515281080091258,0.744467425326359,1.0126579934476,0.292311015483596,0.504867548488229,0.0920498986422993,1.45481451136931,0.355009592516614,0.604512589365842,0.508681776931463,0,0,0,0,0,0,0,0.252320850875628,0,4.69348596989448,0.643240938192885,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.219500570817251,0,0,0,0.651616610620649,0,0,0,0,0.288732895522148,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0.290633938513962,0,0,0.088048434013226,0,0.288239906833923,0.12624243342638,0.063497894292169,0.381988425558278,0,1.71072446022705,0.205654985406647,0.300343057843917,0.285826432630578,0,0,0.1466765716419,0.387815147273333,0,0.845302752556,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0.301439377059586,0,0.499864955910285,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,1.30139853857622,0,0,0,0,0,0,0,0,0.271265023699736,0.207970861530807,0.178428988797162,0.315404830067869,0,0.601892199455438,0,1.03473071292505,0,0,0.0868836144680828,0.195801157462741,0,0,0,0,0,0,0.907170879989041,1.98486246255021,0.460385919864187,1.12264037773229,0.640695746278505,3.58195074346692,1.12597744800525,2.96836132889982,1.54209693802656,0.710246901252508,0.246381468041427,0,0.813472649219715,0,0,0.0920809889358963,0.114814448164607,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30151357865721,0.206082023295445,0,0,0,0,0,0.193341436584244,0,0,0,0,0,0,0,0.495854746082934,0,0,0,0.929691098594572,1.5740617341532,0,0.308033580176089,0,0,0,0,0,0,0,0.255897791311334,0.42793898803392,0,0,0,0,0,0.202182481573316,0,0,0,1.46228093778771,3.16950440270266,0,0.141405431953713,0,0,0,1.31535265576129,0,0.655894752046633,0,0,0,0.143411352204052,0.196498082026242,0.7133421029625,0,1.47775344708365,1.97576935775941,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879049075631364,0,0,0,3.10367830158997,0.890894042497916,3.07160702099232,0,0.281338832821026,0,0,0,0.597743964753209,0.276283915531148,0,0.20453736500431,0,4.0435146396035,0,0,0,0.197286811273867,0,0,0,0.185536196323703,0,0.260427761085233,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0.307801034015188,0,0,0,0.108647371922008,8.93203247249374,2.83952539545773,21.3213910407454,0,0,0.166211681900156,0,0,0,0,0,0,0,0.141353071433941,0,0,0.08845756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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=7078 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=11822 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=382bp_to_AF035289_5end | |||
|coexpression_cluster_id=C50 | |||
|description=CAGE_peak_19_at_TIMP3_5end | |||
|id=chr22:33257962..33257975,+ | |||
|ontology_enrichment_celltype=CL:0000057!7.66e-11!75;CL:0002334!7.85e-10!12;CL:0000055!8.50e-08!180 | |||
|ontology_enrichment_celltype_v019=CL:0002541;3.38e-14;3!CL:0002334;7.20e-12;12!CL:0002593;1.84e-09;2!CL:0000723;2.09e-08;61!CL:0002595;4.82e-08;5!CL:0000134;7.00e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,3.26e-14,3;CL:0002334,6.83e-12,12;CL:0002593,1.89e-09,2;CL:0002595,5.33e-08,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;1.95e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.05e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0004923!6.79e-09!57;UBERON:0007023!4.89e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;3.38e-14;3!UBERON:0000920;3.38e-14;3!UBERON:0004457;3.26e-11;9!UBERON:0000042;3.26e-11;9!UBERON:0005631;4.98e-11;10!UBERON:0000158;4.98e-11;10!UBERON:0002456;1.84e-09;2!UBERON:0005406;2.47e-09;2!UBERON:0003834;4.82e-08;5!UBERON:0001533;4.82e-08;5!UBERON:0003688;9.10e-07;6!UBERON:0002358;9.10e-07;6!UBERON:0003684;9.10e-07;6!UBERON:0001178;9.10e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,3.26e-14,3;UBERON:0005631,8.34e-11,14;UBERON:0000158,8.34e-11,14;UBERON:0003124,2.64e-10,7;UBERON:0005406,1.66e-09,2;UBERON:0004923,1.75e-09,66;UBERON:0002456,1.89e-09,2;UBERON:0004457,2.83e-08,12;UBERON:0000042,2.83e-08,12;UBERON:0003834,5.33e-08,5;UBERON:0001533,5.33e-08,5 | |||
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| |||
|short_description=p19@TIMP3 | |||
}} |
Revision as of 11:38, 12 September 2013
Short description: | p19@TIMP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_19_at_TIMP3_5end |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | 382bp_to_AF035289_5end |
EntrezGene: | TIMP3 |
HGNC: | 11822 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 3.26e-14 | 3 |
preadipocyte | 6.83e-12 | 12 |
smooth muscle cell of the internal thoracic artery | 1.89e-09 | 2 |
smooth muscle cell of the subclavian artery | 5.33e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 3.26e-14 | 3 |
extraembryonic membrane | 8.34e-11 | 14 |
membranous layer | 8.34e-11 | 14 |
chorion | 2.64e-10 | 7 |
perirenal fat | 1.66e-09 | 2 |
organ component layer | 1.75e-09 | 66 |
internal thoracic artery | 1.89e-09 | 2 |
cavity lining | 2.83e-08 | 12 |
serous membrane | 2.83e-08 | 12 |
thoracic segment blood vessel | 5.33e-08 | 5 |
subclavian artery | 5.33e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.05e-07 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.