FFCP PHASE1:Hg19::chr22:31640010..31640021,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr22:31640010..31640021,-|id=chr22:31640010..31640021,-|ontology_enrichment_celltype=CL:0000064!1.45e-16!3;CL:0005012!1.45e-16!3;CL:0000067!1.45e-16!3;CL:0002304!1.45e-16!3;CL:0002580!5.73e-16!3;CL:0000306!1.46e-12!4;CL:0002222!1.46e-12!4;CL:0002224!1.46e-12!4;CL:0002617!7.83e-11!2;CL:0000075!1.37e-08!27;CL:0002586!9.03e-08!3;CL:0002334!7.41e-07!12|ontology_enrichment_celltype_v019=CL:0000064;3.66e-23;3!CL:0000067;3.66e-23;3!CL:0005012;3.66e-23;3!CL:0002304;3.66e-23;3!CL:0000306;9.45e-18;4!CL:0002222;9.45e-18;4!CL:0002224;9.45e-18;4!CL:0000075;6.90e-11;27!CL:0000188;1.04e-08;9|ontology_enrichment_celltype_v019_2=CL:0000064,4.09e-23,3;CL:0000067,4.09e-23,3;CL:0005012,4.09e-23,3;CL:0002304,4.09e-23,3;CL:0000306,8.69e-18,4;CL:0002222,8.69e-18,4;CL:0002224,8.69e-18,4;CL:0000075,6.90e-11,27;CL:0000188,1.04e-08,9|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007625!2.27e-29!11;UBERON:0001778!1.45e-16!3;UBERON:0001775!1.45e-16!3;UBERON:0000019!1.88e-16!19;UBERON:0000047!1.88e-16!19;UBERON:0004088!1.88e-16!19;UBERON:0003072!1.88e-16!19;UBERON:0003071!1.88e-16!19;UBERON:0004128!1.88e-16!19;UBERON:0000970!1.45e-15!20;UBERON:0002104!9.26e-15!21;UBERON:0001456!9.26e-15!21;UBERON:0000020!2.32e-13!23;UBERON:0001801!4.37e-13!14;UBERON:0001032!9.49e-13!24;UBERON:0004456!9.49e-13!24;UBERON:0010077!1.46e-12!4;UBERON:0005389!1.46e-12!4;UBERON:0000484!1.46e-12!4;UBERON:0002546!1.46e-12!4;UBERON:0000965!1.46e-12!4;UBERON:0001803!1.46e-12!4;UBERON:0003073!1.46e-12!4;UBERON:0005426!1.46e-12!4;UBERON:0000488!1.52e-12!4;UBERON:0000310!2.08e-12!10;UBERON:0001443!2.95e-11!11;UBERON:0005085!2.53e-10!29;UBERON:0002203!1.67e-08!6;UBERON:0001768!1.67e-08!6;UBERON:0001781!9.03e-08!3;UBERON:0001782!9.03e-08!3;UBERON:0005424!9.03e-08!3|ontology_enrichment_uberon_v019=UBERON:0007625;6.20e-25;11!UBERON:0001778;3.66e-23;3!UBERON:0001775;3.66e-23;3!UBERON:0001801;7.13e-20;14!UBERON:0010077;9.45e-18;4!UBERON:0005389;9.45e-18;4!UBERON:0000488;9.45e-18;4!UBERON:0000484;9.45e-18;4!UBERON:0000965;9.45e-18;4!UBERON:0001803;9.45e-18;4!UBERON:0000019;5.66e-15;19!UBERON:0000047;5.66e-15;19!UBERON:0004088;5.66e-15;19!UBERON:0010230;5.66e-15;19!UBERON:0000970;2.76e-14;20!UBERON:0002104;1.16e-13;21!UBERON:0001456;1.16e-13;21!UBERON:0000020;1.41e-12;23!UBERON:0002203;2.59e-12;6!UBERON:0001768;2.59e-12;6!UBERON:0002200;2.59e-12;6!UBERON:0001032;4.20e-12;24!UBERON:0004456;4.20e-12;24!UBERON:0010371;2.91e-09;31!UBERON:0006876;2.55e-07;11|ontology_enrichment_uberon_v019_2=UBERON:0007625,6.20e-25,11;UBERON:0001778,4.09e-23,3;UBERON:0001775,4.09e-23,3;UBERON:0001801,7.13e-20,14;UBERON:0010077,8.69e-18,4;UBERON:0005389,8.69e-18,4;UBERON:0000484,8.69e-18,4;UBERON:0002546,8.69e-18,4;UBERON:0000965,8.69e-18,4;UBERON:0001803,8.69e-18,4;UBERON:0003073,8.69e-18,4;UBERON:0005426,8.69e-18,4;UBERON:0000488,1.03e-17,4;UBERON:0000019,2.76e-14,20;UBERON:0000047,2.76e-14,20;UBERON:0010312,2.76e-14,20;UBERON:0004088,2.76e-14,20;UBERON:0010230,2.76e-14,20;UBERON:0003072,2.76e-14,20;UBERON:0004128,2.76e-14,20;UBERON:0003071,2.76e-14,20;UBERON:0000970,1.16e-13,21;UBERON:0002104,1.16e-13,21;UBERON:0001456,4.26e-13,22;UBERON:0002203,2.74e-12,6;UBERON:0001768,2.74e-12,6;UBERON:0002200,2.74e-12,6;UBERON:0000020,4.20e-12,24;UBERON:0001032,4.20e-12,24;UBERON:0004456,4.20e-12,24;UBERON:0005085,1.25e-09,31;UBERON:0000076,1.35e-09,8;UBERON:0006876,2.63e-07,11|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22895262313288,0.665188192387692,0.87834785693126,0,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0.710019185033229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0,0.241011029883482,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44331342025273,0.811512834825538,0.70445216541493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496215615637554,0.306923946576125,0.280660094433074,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0.325378394664303,0,0,0.082509499920588,0,0,0,0.096670718292122,0,0,0,0,0,0,2.22580089116843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr22:31640010..31640021,- | |||
|id=chr22:31640010..31640021,- | |||
|ontology_enrichment_celltype=CL:0000064!1.45e-16!3;CL:0005012!1.45e-16!3;CL:0000067!1.45e-16!3;CL:0002304!1.45e-16!3;CL:0002580!5.73e-16!3;CL:0000306!1.46e-12!4;CL:0002222!1.46e-12!4;CL:0002224!1.46e-12!4;CL:0002617!7.83e-11!2;CL:0000075!1.37e-08!27;CL:0002586!9.03e-08!3;CL:0002334!7.41e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000064;3.66e-23;3!CL:0000067;3.66e-23;3!CL:0005012;3.66e-23;3!CL:0002304;3.66e-23;3!CL:0000306;9.45e-18;4!CL:0002222;9.45e-18;4!CL:0002224;9.45e-18;4!CL:0000075;6.90e-11;27!CL:0000188;1.04e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,4.09e-23,3;CL:0000067,4.09e-23,3;CL:0005012,4.09e-23,3;CL:0002304,4.09e-23,3;CL:0000306,8.69e-18,4;CL:0002222,8.69e-18,4;CL:0002224,8.69e-18,4;CL:0000075,6.90e-11,27;CL:0000188,1.04e-08,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007625!2.27e-29!11;UBERON:0001778!1.45e-16!3;UBERON:0001775!1.45e-16!3;UBERON:0000019!1.88e-16!19;UBERON:0000047!1.88e-16!19;UBERON:0004088!1.88e-16!19;UBERON:0003072!1.88e-16!19;UBERON:0003071!1.88e-16!19;UBERON:0004128!1.88e-16!19;UBERON:0000970!1.45e-15!20;UBERON:0002104!9.26e-15!21;UBERON:0001456!9.26e-15!21;UBERON:0000020!2.32e-13!23;UBERON:0001801!4.37e-13!14;UBERON:0001032!9.49e-13!24;UBERON:0004456!9.49e-13!24;UBERON:0010077!1.46e-12!4;UBERON:0005389!1.46e-12!4;UBERON:0000484!1.46e-12!4;UBERON:0002546!1.46e-12!4;UBERON:0000965!1.46e-12!4;UBERON:0001803!1.46e-12!4;UBERON:0003073!1.46e-12!4;UBERON:0005426!1.46e-12!4;UBERON:0000488!1.52e-12!4;UBERON:0000310!2.08e-12!10;UBERON:0001443!2.95e-11!11;UBERON:0005085!2.53e-10!29;UBERON:0002203!1.67e-08!6;UBERON:0001768!1.67e-08!6;UBERON:0001781!9.03e-08!3;UBERON:0001782!9.03e-08!3;UBERON:0005424!9.03e-08!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0007625;6.20e-25;11!UBERON:0001778;3.66e-23;3!UBERON:0001775;3.66e-23;3!UBERON:0001801;7.13e-20;14!UBERON:0010077;9.45e-18;4!UBERON:0005389;9.45e-18;4!UBERON:0000488;9.45e-18;4!UBERON:0000484;9.45e-18;4!UBERON:0000965;9.45e-18;4!UBERON:0001803;9.45e-18;4!UBERON:0000019;5.66e-15;19!UBERON:0000047;5.66e-15;19!UBERON:0004088;5.66e-15;19!UBERON:0010230;5.66e-15;19!UBERON:0000970;2.76e-14;20!UBERON:0002104;1.16e-13;21!UBERON:0001456;1.16e-13;21!UBERON:0000020;1.41e-12;23!UBERON:0002203;2.59e-12;6!UBERON:0001768;2.59e-12;6!UBERON:0002200;2.59e-12;6!UBERON:0001032;4.20e-12;24!UBERON:0004456;4.20e-12;24!UBERON:0010371;2.91e-09;31!UBERON:0006876;2.55e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007625,6.20e-25,11;UBERON:0001778,4.09e-23,3;UBERON:0001775,4.09e-23,3;UBERON:0001801,7.13e-20,14;UBERON:0010077,8.69e-18,4;UBERON:0005389,8.69e-18,4;UBERON:0000484,8.69e-18,4;UBERON:0002546,8.69e-18,4;UBERON:0000965,8.69e-18,4;UBERON:0001803,8.69e-18,4;UBERON:0003073,8.69e-18,4;UBERON:0005426,8.69e-18,4;UBERON:0000488,1.03e-17,4;UBERON:0000019,2.76e-14,20;UBERON:0000047,2.76e-14,20;UBERON:0010312,2.76e-14,20;UBERON:0004088,2.76e-14,20;UBERON:0010230,2.76e-14,20;UBERON:0003072,2.76e-14,20;UBERON:0004128,2.76e-14,20;UBERON:0003071,2.76e-14,20;UBERON:0000970,1.16e-13,21;UBERON:0002104,1.16e-13,21;UBERON:0001456,4.26e-13,22;UBERON:0002203,2.74e-12,6;UBERON:0001768,2.74e-12,6;UBERON:0002200,2.74e-12,6;UBERON:0000020,4.20e-12,24;UBERON:0001032,4.20e-12,24;UBERON:0004456,4.20e-12,24;UBERON:0005085,1.25e-09,31;UBERON:0000076,1.35e-09,8;UBERON:0006876,2.63e-07,11 | |||
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|short_description=p@chr22:31640010..31640021,- | |||
}} |
Revision as of 11:33, 12 September 2013
Short description: | p@chr22:31640010..31640021, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr22:31640010..31640021, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 4.09e-23 | 3 |
ciliated epithelial cell | 4.09e-23 | 3 |
multi-ciliated epithelial cell | 4.09e-23 | 3 |
non-pigmented ciliary epithelial cell | 4.09e-23 | 3 |
crystallin accumulating cell | 8.69e-18 | 4 |
vertebrate lens cell | 8.69e-18 | 4 |
lens epithelial cell | 8.69e-18 | 4 |
columnar/cuboidal epithelial cell | 6.90e-11 | 27 |
cell of skeletal muscle | 1.04e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
pigment epithelium of eye | 6.20e-25 | 11 |
ciliary epithelium | 4.09e-23 | 3 |
ciliary body | 4.09e-23 | 3 |
anterior segment of eyeball | 7.13e-20 | 14 |
cuboidal epithelium | 8.69e-18 | 4 |
transparent eye structure | 8.69e-18 | 4 |
simple cuboidal epithelium | 8.69e-18 | 4 |
cranial placode | 8.69e-18 | 4 |
lens of camera-type eye | 8.69e-18 | 4 |
epithelium of lens | 8.69e-18 | 4 |
lens placode | 8.69e-18 | 4 |
lens vesicle | 8.69e-18 | 4 |
atypical epithelium | 1.03e-17 | 4 |
camera-type eye | 2.76e-14 | 20 |
simple eye | 2.76e-14 | 20 |
immature eye | 2.76e-14 | 20 |
ocular region | 2.76e-14 | 20 |
eyeball of camera-type eye | 2.76e-14 | 20 |
optic cup | 2.76e-14 | 20 |
optic vesicle | 2.76e-14 | 20 |
eye primordium | 2.76e-14 | 20 |
eye | 1.16e-13 | 21 |
visual system | 1.16e-13 | 21 |
face | 4.26e-13 | 22 |
vasculature of eye | 2.74e-12 | 6 |
uvea | 2.74e-12 | 6 |
vasculature of head | 2.74e-12 | 6 |
sense organ | 4.20e-12 | 24 |
sensory system | 4.20e-12 | 24 |
entire sense organ system | 4.20e-12 | 24 |
ectodermal placode | 1.25e-09 | 31 |
external ectoderm | 1.35e-09 | 8 |
vasculature of organ | 2.63e-07 | 11 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.