FFCP PHASE1:Hg19::chr22:30201087..30201093,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=84164|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=24103|TSSclassifier=W|UniProt=|association_with_transcript=-274bp_to_ENST00000487486_5end|coexpression_cluster_id=C2213|description=CAGE_peak_5_at_ASCC2_5end|id=chr22:30201087..30201093,-|ontology_enrichment_celltype=CL:0002076!1.31e-08!43;CL:0002621!5.44e-07!3|ontology_enrichment_celltype_v019=CL:0000244;2.21e-13;4!CL:0000731;2.21e-13;4|ontology_enrichment_celltype_v019_2=CL:0000244,2.67e-13,4;CL:0000731,2.67e-13,4|ontology_enrichment_development_v019=UBERON:0009143;5.49e-14;1!UBERON:0006298;5.49e-14;1!UBERON:0008814;1.12e-07;2!UBERON:0010056;1.12e-07;2!UBERON:0006595;6.31e-07;86|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000161!4.48e-17!35;UBERON:0000166!2.18e-13!21;UBERON:0004119!2.03e-11!169;UBERON:0000925!2.03e-11!169;UBERON:0006595!2.03e-11!169;UBERON:0001004!2.94e-11!72;UBERON:0006562!1.66e-10!11;UBERON:0000165!1.03e-09!28;UBERON:0000930!1.03e-09!28;UBERON:0000078!3.27e-09!18;UBERON:0004921!1.21e-08!129;UBERON:0004185!1.21e-08!129;UBERON:0001008!2.04e-08!45;UBERON:0001007!2.33e-08!155;UBERON:0001555!2.33e-08!155;UBERON:0007026!2.33e-08!155;UBERON:0001042!7.97e-08!10;UBERON:0009145!7.97e-08!10;UBERON:0001044!9.43e-08!6;UBERON:0003293!9.43e-08!6;UBERON:0003294!9.43e-08!6;UBERON:0010047!9.43e-08!6;UBERON:0000167!9.43e-08!6;UBERON:0003408!1.31e-07!10;UBERON:0001723!1.47e-07!3;UBERON:0001033!1.47e-07!3;UBERON:0010056!1.47e-07!3;UBERON:0007023!4.62e-07!115;UBERON:0001949!5.44e-07!3;UBERON:0000065!5.60e-07!53;UBERON:0006554!6.35e-07!44|ontology_enrichment_uberon_v019=UBERON:0001723;1.04e-17;3!UBERON:0001033;1.04e-17;3!UBERON:0002372;3.08e-14;1!UBERON:0001961;3.08e-14;1!UBERON:0001744;3.08e-14;1!UBERON:0001042;3.08e-14;1!UBERON:0001735;3.08e-14;1!UBERON:0001736;5.49e-14;1!UBERON:0000996;9.14e-14;1!UBERON:0000165;2.78e-11;28!UBERON:0000365;6.80e-11;5!UBERON:0001044;1.95e-09;6!UBERON:0003293;1.95e-09;6!UBERON:0003294;1.95e-09;6!UBERON:0010047;1.95e-09;6!UBERON:0003408;1.95e-09;6!UBERON:0000167;1.95e-09;6!UBERON:0005910;3.14e-09;6!UBERON:0001041;9.56e-09;14!UBERON:0003126;5.66e-08;7!UBERON:0001005;5.66e-08;7!UBERON:0006562;9.25e-08;2!UBERON:0000341;1.05e-07;2!UBERON:0001829;1.23e-07;2!UBERON:0001255;1.59e-07;2!UBERON:0003127;1.59e-07;2!UBERON:0001556;1.59e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0000161,1.77e-21,36;UBERON:0001723,9.14e-18,3;UBERON:0001033,9.14e-18,3;UBERON:0010056,9.14e-18,3;UBERON:0000166,2.20e-14,22;UBERON:0002372,3.08e-14,1;UBERON:0001961,3.08e-14,1;UBERON:0001744,3.08e-14,1;UBERON:0001735,3.08e-14,1;UBERON:0001736,5.85e-14,1;UBERON:0006298,5.85e-14,1;UBERON:0000996,6.65e-14,1;UBERON:0001042,5.01e-12,10;UBERON:0009145,5.01e-12,10;UBERON:0007023,6.23e-12,114;UBERON:0004119,1.73e-11,160;UBERON:0000925,1.73e-11,160;UBERON:0006595,1.73e-11,160;UBERON:0004921,2.34e-11,118;UBERON:0006562,5.51e-11,11;UBERON:0000165,6.69e-11,29;UBERON:0000930,6.69e-11,29;UBERON:0000365,7.89e-11,5;UBERON:0001044,1.99e-09,6;UBERON:0003293,1.99e-09,6;UBERON:0003294,1.99e-09,6;UBERON:0010047,1.99e-09,6;UBERON:0000167,1.99e-09,6;UBERON:0005910,3.56e-09,6;UBERON:0001007,5.40e-09,145;UBERON:0001555,5.40e-09,145;UBERON:0007026,5.40e-09,145;UBERON:0000162,1.57e-08,14;UBERON:0001353,1.57e-08,14;UBERON:0000163,1.57e-08,14;UBERON:0006866,1.57e-08,14;UBERON:0000164,1.57e-08,14;UBERON:0000931,1.57e-08,14;UBERON:0001041,1.93e-08,87;UBERON:0004122,5.38e-08,15;UBERON:0003126,5.47e-08,7;UBERON:0001005,5.47e-08,7;UBERON:0001004,9.64e-08,74;UBERON:0000341,1.05e-07,2;UBERON:0001829,1.28e-07,2;UBERON:0003127,1.54e-07,2;UBERON:0001255,1.75e-07,2;UBERON:0001556,1.75e-07,2;UBERON:0003102,2.72e-07,99;UBERON:0000153,4.95e-07,62;UBERON:0007811,4.95e-07,62|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330569830721956,0,0,0.50578890427775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68120910214315,0,0.0941438007767792,0,3.36942951335251,3.10401107475673,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=84164 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24103 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=-274bp_to_ENST00000487486_5end | |||
|coexpression_cluster_id=C2213 | |||
|description=CAGE_peak_5_at_ASCC2_5end | |||
|id=chr22:30201087..30201093,- | |||
|ontology_enrichment_celltype=CL:0002076!1.31e-08!43;CL:0002621!5.44e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000244;2.21e-13;4!CL:0000731;2.21e-13;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000244,2.67e-13,4;CL:0000731,2.67e-13,4 | |||
|ontology_enrichment_development_v019=UBERON:0009143;5.49e-14;1!UBERON:0006298;5.49e-14;1!UBERON:0008814;1.12e-07;2!UBERON:0010056;1.12e-07;2!UBERON:0006595;6.31e-07;86 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000161!4.48e-17!35;UBERON:0000166!2.18e-13!21;UBERON:0004119!2.03e-11!169;UBERON:0000925!2.03e-11!169;UBERON:0006595!2.03e-11!169;UBERON:0001004!2.94e-11!72;UBERON:0006562!1.66e-10!11;UBERON:0000165!1.03e-09!28;UBERON:0000930!1.03e-09!28;UBERON:0000078!3.27e-09!18;UBERON:0004921!1.21e-08!129;UBERON:0004185!1.21e-08!129;UBERON:0001008!2.04e-08!45;UBERON:0001007!2.33e-08!155;UBERON:0001555!2.33e-08!155;UBERON:0007026!2.33e-08!155;UBERON:0001042!7.97e-08!10;UBERON:0009145!7.97e-08!10;UBERON:0001044!9.43e-08!6;UBERON:0003293!9.43e-08!6;UBERON:0003294!9.43e-08!6;UBERON:0010047!9.43e-08!6;UBERON:0000167!9.43e-08!6;UBERON:0003408!1.31e-07!10;UBERON:0001723!1.47e-07!3;UBERON:0001033!1.47e-07!3;UBERON:0010056!1.47e-07!3;UBERON:0007023!4.62e-07!115;UBERON:0001949!5.44e-07!3;UBERON:0000065!5.60e-07!53;UBERON:0006554!6.35e-07!44 | |||
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|short_description=p5@ASCC2 | |||
}} |
Revision as of 11:24, 12 September 2013
Short description: | p5@ASCC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_ASCC2_5end |
Coexpression cluster: | C2213_salivary_esophagus_tonsil_throat_tongue_submaxillary_parotid |
Association with transcript: | -274bp_to_ENST00000487486_5end |
EntrezGene: | ASCC2 |
HGNC: | 24103 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 2.67e-13 | 4 |
urothelial cell | 2.67e-13 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.