FFCP PHASE1:Hg19::chr21:30503034..30503079,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=56911|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=16457|TSSclassifier=S|UniProt=|association_with_transcript=69bp_to_uc002yng.2_5end|coexpression_cluster_id=C4074|description=CAGE_peak_3_at_C21orf7_5end|id=chr21:30503034..30503079,+|ontology_enrichment_celltype=CL:0000055!1.22e-21!180;CL:0000680!9.77e-13!57;CL:0000056!9.77e-13!57;CL:0000355!9.77e-13!57;CL:0000183!1.09e-11!59;CL:0000187!6.74e-11!54;CL:0000057!1.21e-10!75;CL:0000192!4.04e-10!42;CL:0000514!4.04e-10!42;CL:0000393!1.12e-08!60;CL:0000211!1.12e-08!60;CL:0000359!7.64e-08!32|ontology_enrichment_celltype_v019=CL:0000056;3.24e-07;4!CL:0000632;5.01e-07;3!CL:0000134;5.11e-07;55|ontology_enrichment_celltype_v019_2=CL:0000515,2.04e-07,4;CL:0000632,5.45e-07,3;CL:0000680,9.21e-07,58;CL:0000056,9.21e-07,58;CL:0000355,9.21e-07,58|ontology_enrichment_development_v019=CL:0000515;3.24e-07;4|ontology_enrichment_disease=DOID:2394!1.10e-07!14|ontology_enrichment_disease_v019=DOID:0060084;8.31e-07;3!DOID:127;8.31e-07;3|ontology_enrichment_disease_v019_2=DOID:2394,7.00e-07,14;DOID:0060084,8.60e-07,3;DOID:127,8.60e-07,3|ontology_enrichment_uberon=UBERON:0001134!3.60e-15!61;UBERON:0002036!3.60e-15!61;UBERON:0003082!3.60e-15!61;UBERON:0004290!7.19e-15!70;UBERON:0002385!7.34e-15!63;UBERON:0001015!7.34e-15!63;UBERON:0000383!7.34e-15!63;UBERON:0000914!8.13e-14!83;UBERON:0002329!8.13e-14!83;UBERON:0003077!8.13e-14!83;UBERON:0003059!8.13e-14!83;UBERON:0007282!8.13e-14!83;UBERON:0009618!8.13e-14!83;UBERON:0007285!8.13e-14!83;UBERON:0005256!2.43e-12!143;UBERON:0000486!4.33e-11!82;UBERON:0000490!2.43e-09!138;UBERON:0000475!3.76e-09!365;UBERON:0002100!1.06e-07!216;UBERON:0003104!3.00e-07!238;UBERON:0009142!3.00e-07!238;UBERON:0000119!3.95e-07!312;UBERON:0000948!4.43e-07!24;UBERON:0005498!4.43e-07!24;UBERON:0004140!4.43e-07!24;UBERON:0009881!4.43e-07!24;UBERON:0004141!4.43e-07!24;UBERON:0003084!4.43e-07!24;UBERON:0007005!4.43e-07!24;UBERON:0004139!4.43e-07!24;UBERON:0004291!4.43e-07!24;UBERON:0000481!4.92e-07!347;UBERON:0000483!7.77e-07!309|ontology_enrichment_uberon_v019=UBERON:0000488;1.81e-07;4!UBERON:0001134;2.62e-07;16!UBERON:0002036;2.62e-07;16|ontology_enrichment_uberon_v019_2=UBERON:0005256,1.13e-10,122;UBERON:0007524,7.50e-10,73;UBERON:0007503,9.37e-10,78;UBERON:0001134,1.45e-09,62;UBERON:0002036,1.45e-09,62;UBERON:0003082,1.45e-09,62;UBERON:0002329,1.78e-09,71;UBERON:0003059,1.78e-09,71;UBERON:0007282,1.78e-09,71;UBERON:0004290,1.78e-09,71;UBERON:0009618,1.78e-09,71;UBERON:0003077,2.99e-09,72;UBERON:0007285,2.99e-09,72;UBERON:0002385,4.50e-09,64;UBERON:0001015,4.50e-09,64;UBERON:0000383,4.50e-09,64;UBERON:0003104,6.89e-09,160;UBERON:0009142,6.89e-09,160;UBERON:0000490,5.98e-08,148;UBERON:0000488,1.57e-07,4;UBERON:0000486,3.60e-07,83;UBERON:0002049,3.96e-07,78;UBERON:0007798,3.96e-07,78|phase1_expression=0,0.214100523890983,0,0,0,0,0,1.26343974685366,0,0,0,0,0,0,0,0,0.602694528023977,1.46062018077475,0,0.61560529038394,1.02000345622126,0.626909442956176,0.85870796139317,0.410623275218653,3.01302335027527,0,0,0,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.42938867502708,0,0,0,0,0.486634870302636,1.41802225746102,10.6430110782031,4.47957407034943,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.933382937297,2.91250176828533,1.05927344650575,0.286836620748814,0.709336764396714,8.97084160227691,2.1349799145941,3.45334567784024,0,0,0.163461903113459,0.302714855289863,0,0,0,0.570471821544449,3.58676833324323,0.352303495931295,0,0,0.204154171254893,0.122834317311768,0.103325781175765,0,0,2.73048408581408,2.87447256726495,0.168336113954066,0.125118519871964,0.277064115484183,0,0.30648779579902,0,2.94923676216055,0,0.640672166455702,3.17897851739343,0,2.06105058476878,0.772921620136887,2.60563598864226,0.168776332241266,0.876933046450788,0.252433774244115,1.56484827691909,0,0,1.30977727695932,0,0,0,0,0,0,0,0,0,0,0,3.85944562915731,0,0.464367928031979,0.721879481669586,0,0.168584690078102,0,0,0,0,0,0,0,0,1.40241773803446,8.231480226628,4.41026134156626,0,0,0,0,0,1.54411029268673,0,0,0,0,0,0,0,0,4.57893907519705,0,0,0,0,0,0,0,0,0,0.335964256397719,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0.300343057843917,0,0.784917590417525,0,0.51336800074665,2.06834745212444,0,0,2.92531928243358,5.2003718455683,0,1.41849132023278,0,0.57191197463259,0,0,0.325736184293735,1.06617584622764,0,0,5.22920075160176,2.7992437530976,0,0,0,28.0361080925152,8.04033550838797,1.42636905040718,1.88215698667853,4.52047909610843,3.58121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.813795071099207,0,0,0,0.234282829985426,0,2.27407504055985,1.03473071292505,2.65690239414175,2.02806085395873,0.521301686808497,0,1.37257369524342,0,0,0,0,0,0,0.992431231275107,0.460385919864187,0,0.51255659702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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=56911 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16457 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=69bp_to_uc002yng.2_5end | |||
|coexpression_cluster_id=C4074 | |||
|description=CAGE_peak_3_at_C21orf7_5end | |||
|id=chr21:30503034..30503079,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.22e-21!180;CL:0000680!9.77e-13!57;CL:0000056!9.77e-13!57;CL:0000355!9.77e-13!57;CL:0000183!1.09e-11!59;CL:0000187!6.74e-11!54;CL:0000057!1.21e-10!75;CL:0000192!4.04e-10!42;CL:0000514!4.04e-10!42;CL:0000393!1.12e-08!60;CL:0000211!1.12e-08!60;CL:0000359!7.64e-08!32 | |||
|ontology_enrichment_celltype_v019=CL:0000056;3.24e-07;4!CL:0000632;5.01e-07;3!CL:0000134;5.11e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000515,2.04e-07,4;CL:0000632,5.45e-07,3;CL:0000680,9.21e-07,58;CL:0000056,9.21e-07,58;CL:0000355,9.21e-07,58 | |||
|ontology_enrichment_development_v019=CL:0000515;3.24e-07;4 | |||
|ontology_enrichment_disease=DOID:2394!1.10e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:0060084;8.31e-07;3!DOID:127;8.31e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,7.00e-07,14;DOID:0060084,8.60e-07,3;DOID:127,8.60e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0001134!3.60e-15!61;UBERON:0002036!3.60e-15!61;UBERON:0003082!3.60e-15!61;UBERON:0004290!7.19e-15!70;UBERON:0002385!7.34e-15!63;UBERON:0001015!7.34e-15!63;UBERON:0000383!7.34e-15!63;UBERON:0000914!8.13e-14!83;UBERON:0002329!8.13e-14!83;UBERON:0003077!8.13e-14!83;UBERON:0003059!8.13e-14!83;UBERON:0007282!8.13e-14!83;UBERON:0009618!8.13e-14!83;UBERON:0007285!8.13e-14!83;UBERON:0005256!2.43e-12!143;UBERON:0000486!4.33e-11!82;UBERON:0000490!2.43e-09!138;UBERON:0000475!3.76e-09!365;UBERON:0002100!1.06e-07!216;UBERON:0003104!3.00e-07!238;UBERON:0009142!3.00e-07!238;UBERON:0000119!3.95e-07!312;UBERON:0000948!4.43e-07!24;UBERON:0005498!4.43e-07!24;UBERON:0004140!4.43e-07!24;UBERON:0009881!4.43e-07!24;UBERON:0004141!4.43e-07!24;UBERON:0003084!4.43e-07!24;UBERON:0007005!4.43e-07!24;UBERON:0004139!4.43e-07!24;UBERON:0004291!4.43e-07!24;UBERON:0000481!4.92e-07!347;UBERON:0000483!7.77e-07!309 | |||
|ontology_enrichment_uberon_v019=UBERON:0000488;1.81e-07;4!UBERON:0001134;2.62e-07;16!UBERON:0002036;2.62e-07;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005256,1.13e-10,122;UBERON:0007524,7.50e-10,73;UBERON:0007503,9.37e-10,78;UBERON:0001134,1.45e-09,62;UBERON:0002036,1.45e-09,62;UBERON:0003082,1.45e-09,62;UBERON:0002329,1.78e-09,71;UBERON:0003059,1.78e-09,71;UBERON:0007282,1.78e-09,71;UBERON:0004290,1.78e-09,71;UBERON:0009618,1.78e-09,71;UBERON:0003077,2.99e-09,72;UBERON:0007285,2.99e-09,72;UBERON:0002385,4.50e-09,64;UBERON:0001015,4.50e-09,64;UBERON:0000383,4.50e-09,64;UBERON:0003104,6.89e-09,160;UBERON:0009142,6.89e-09,160;UBERON:0000490,5.98e-08,148;UBERON:0000488,1.57e-07,4;UBERON:0000486,3.60e-07,83;UBERON:0002049,3.96e-07,78;UBERON:0007798,3.96e-07,78 | |||
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| |||
|short_description=p3@C21orf7 | |||
}} |
Revision as of 10:01, 12 September 2013
Short description: | p3@C21orf7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_C21orf7_5end |
Coexpression cluster: | C4074_Multipotent_hepatic_leiomyoma_mesothelioma_mesodermal_tongue_mesenchymal |
Association with transcript: | 69bp_to_uc002yng.2_5end |
EntrezGene: | C21orf7 |
HGNC: | 16457 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skeletal muscle myoblast | 2.04e-07 | 4 |
hepatic stellate cell | 5.45e-07 | 3 |
muscle precursor cell | 9.21e-07 | 58 |
myoblast | 9.21e-07 | 58 |
multi-potent skeletal muscle stem cell | 9.21e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
trunk mesenchyme | 1.13e-10 | 122 |
dense mesenchyme tissue | 7.50e-10 | 73 |
epithelial vesicle | 9.37e-10 | 78 |
skeletal muscle tissue | 1.45e-09 | 62 |
striated muscle tissue | 1.45e-09 | 62 |
myotome | 1.45e-09 | 62 |
somite | 1.78e-09 | 71 |
presomitic mesoderm | 1.78e-09 | 71 |
presumptive segmental plate | 1.78e-09 | 71 |
dermomyotome | 1.78e-09 | 71 |
trunk paraxial mesoderm | 1.78e-09 | 71 |
paraxial mesoderm | 2.99e-09 | 72 |
presumptive paraxial mesoderm | 2.99e-09 | 72 |
muscle tissue | 4.50e-09 | 64 |
musculature | 4.50e-09 | 64 |
musculature of body | 4.50e-09 | 64 |
mesenchyme | 6.89e-09 | 160 |
entire embryonic mesenchyme | 6.89e-09 | 160 |
unilaminar epithelium | 5.98e-08 | 148 |
atypical epithelium | 1.57e-07 | 4 |
multilaminar epithelium | 3.60e-07 | 83 |
vasculature | 3.96e-07 | 78 |
vascular system | 3.96e-07 | 78 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 7.00e-07 | 14 |
cell type benign neoplasm | 8.60e-07 | 3 |
leiomyoma | 8.60e-07 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.