FFCP PHASE1:Hg19::chr20:5903421..5903428,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C377|description=CAGE_peak_at_chr20:5903421..5903428,+|id=chr20:5903421..5903428,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006215;1.96e-14;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3119;2.37e-12;14|ontology_enrichment_disease_v019_2=DOID:3119,2.37e-12,14|ontology_enrichment_uberon=UBERON:0001049!4.10e-39!57;UBERON:0005068!4.10e-39!57;UBERON:0006241!4.10e-39!57;UBERON:0007135!4.10e-39!57;UBERON:0002616!4.54e-34!59;UBERON:0000955!3.62e-31!69;UBERON:0006238!3.62e-31!69;UBERON:0001017!4.46e-31!82;UBERON:0002619!4.63e-30!22;UBERON:0005743!2.00e-29!86;UBERON:0000073!9.06e-29!94;UBERON:0001016!9.06e-29!94;UBERON:0002780!2.49e-28!41;UBERON:0001890!2.49e-28!41;UBERON:0006240!2.49e-28!41;UBERON:0001869!1.05e-27!32;UBERON:0003080!1.37e-27!42;UBERON:0003075!4.65e-27!86;UBERON:0007284!4.65e-27!86;UBERON:0002791!8.38e-27!33;UBERON:0000956!2.56e-26!25;UBERON:0000203!2.56e-26!25;UBERON:0002020!5.93e-26!34;UBERON:0003528!5.93e-26!34;UBERON:0001893!5.93e-26!34;UBERON:0002346!1.20e-25!90;UBERON:0007023!1.87e-25!115;UBERON:0001950!1.03e-22!20;UBERON:0003056!4.48e-18!61;UBERON:0000033!2.69e-17!123;UBERON:0000349!4.22e-17!5;UBERON:0000153!2.83e-16!129;UBERON:0007811!2.83e-16!129;UBERON:0004121!7.31e-14!169;UBERON:0000924!2.00e-13!173;UBERON:0006601!2.00e-13!173;UBERON:0003076!1.73e-12!15;UBERON:0003057!1.73e-12!15;UBERON:0000007!2.29e-12!2;UBERON:0001954!7.64e-12!2;UBERON:0003022!7.64e-12!2;UBERON:0002421!7.64e-12!2;UBERON:0002600!7.64e-12!2;UBERON:0004733!3.54e-11!12;UBERON:0002028!3.54e-11!12;UBERON:0007277!3.54e-11!12;UBERON:0000025!2.24e-10!194;UBERON:0004732!2.69e-10!13;UBERON:0001872!5.74e-10!5;UBERON:0002680!6.39e-10!9;UBERON:0001895!6.39e-10!9;UBERON:0010092!6.39e-10!9;UBERON:0004111!3.78e-09!241;UBERON:0002037!7.17e-09!6;UBERON:0006215!7.17e-09!6;UBERON:0000481!1.98e-07!347;UBERON:0002079!6.08e-07!1;UBERON:0000477!7.22e-07!286;UBERON:0000064!8.56e-07!219|ontology_enrichment_uberon_v019=UBERON:0000007;3.44e-21;2!UBERON:0001954;4.66e-21;2!UBERON:0003022;4.66e-21;2!UBERON:0002421;4.66e-21;2!UBERON:0002600;4.66e-21;2!UBERON:0003296;2.66e-11;4!UBERON:0010133;2.66e-11;4!UBERON:0000349;2.97e-09;5!UBERON:0002037;7.01e-08;6!UBERON:0001894;5.23e-07;7|ontology_enrichment_uberon_v019_2=UBERON:0000007,3.11e-21,2;UBERON:0001954,4.66e-21,2;UBERON:0003022,4.66e-21,2;UBERON:0002421,4.66e-21,2;UBERON:0002600,4.66e-21,2;UBERON:0003296,2.53e-11,4;UBERON:0010133,2.53e-11,4;UBERON:0000349,2.97e-09,5;UBERON:0002037,7.25e-08,6;UBERON:0006215,7.25e-08,6;UBERON:0000073,2.12e-07,53;UBERON:0002616,2.12e-07,53;UBERON:0001049,4.78e-07,56;UBERON:0005068,4.78e-07,56;UBERON:0006241,4.78e-07,56;UBERON:0007135,4.78e-07,56;UBERON:0001894,5.08e-07,7;UBERON:0006222,5.08e-07,7|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,1.52581736317083,0.552896299656123,0.591095237907095,0.658156191461918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330991955875499,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0.514784993585894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.18091875923721,0.136203406111576,0,0,0,0,0,0.121499113316049,0,0.0788057072991982,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0.122026264901963,0,0,0.332787154610557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655257829152084,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0.159633859057151,0.82046545696302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0.0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C377 | |||
|description=CAGE_peak_at_chr20:5903421..5903428,+ | |||
|id=chr20:5903421..5903428,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.96e-14;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3119;2.37e-12;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,2.37e-12,14 | |||
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|ontology_enrichment_uberon_v019=UBERON:0000007;3.44e-21;2!UBERON:0001954;4.66e-21;2!UBERON:0003022;4.66e-21;2!UBERON:0002421;4.66e-21;2!UBERON:0002600;4.66e-21;2!UBERON:0003296;2.66e-11;4!UBERON:0010133;2.66e-11;4!UBERON:0000349;2.97e-09;5!UBERON:0002037;7.01e-08;6!UBERON:0001894;5.23e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,3.11e-21,2;UBERON:0001954,4.66e-21,2;UBERON:0003022,4.66e-21,2;UBERON:0002421,4.66e-21,2;UBERON:0002600,4.66e-21,2;UBERON:0003296,2.53e-11,4;UBERON:0010133,2.53e-11,4;UBERON:0000349,2.97e-09,5;UBERON:0002037,7.25e-08,6;UBERON:0006215,7.25e-08,6;UBERON:0000073,2.12e-07,53;UBERON:0002616,2.12e-07,53;UBERON:0001049,4.78e-07,56;UBERON:0005068,4.78e-07,56;UBERON:0006241,4.78e-07,56;UBERON:0007135,4.78e-07,56;UBERON:0001894,5.08e-07,7;UBERON:0006222,5.08e-07,7 | |||
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|short_description=p@chr20:5903421..5903428,+ | |||
}} |
Revision as of 09:27, 12 September 2013
Short description: | p@chr20:5903421..5903428, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr20:5903421..5903428, + |
Coexpression cluster: | C377_pituitary_small_smallcell_cerebellum_pineal_pons_neuroblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pituitary gland | 3.11e-21 | 2 |
Ammon's horn | 4.66e-21 | 2 |
lobe parts of cerebral cortex | 4.66e-21 | 2 |
hippocampal formation | 4.66e-21 | 2 |
limbic lobe | 4.66e-21 | 2 |
gland of diencephalon | 2.53e-11 | 4 |
neuroendocrine gland | 2.53e-11 | 4 |
limbic system | 2.97e-09 | 5 |
cerebellum | 7.25e-08 | 6 |
rhombic lip | 7.25e-08 | 6 |
regional part of nervous system | 2.12e-07 | 53 |
regional part of brain | 2.12e-07 | 53 |
neural tube | 4.78e-07 | 56 |
neural rod | 4.78e-07 | 56 |
future spinal cord | 4.78e-07 | 56 |
neural keel | 4.78e-07 | 56 |
diencephalon | 5.08e-07 | 7 |
future diencephalon | 5.08e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 2.37e-12 | 14 |
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