FFCP PHASE1:Hg19::chr20:17640391..17640408,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=6238|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=10448|TSSclassifier=N|UniProt=Q9P2E9|association_with_transcript=215bp_to_AF007575_5end|description=CAGE_peak_23_at_RRBP1_5end|id=chr20:17640391..17640408,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000182;6.49e-16;12!CL:0000228;4.22e-13;1!CL:0002372;4.22e-13;1!CL:0002591;4.22e-13;1!CL:0002262;3.48e-07;2!CL:0002561;3.48e-07;2!CL:1000398;3.48e-07;2!CL:1000487;3.48e-07;2!CL:0002600;3.48e-07;2|ontology_enrichment_celltype_v019_2=CL:0000182,4.59e-16,12;CL:0000228,2.06e-13,1;CL:0002372,2.06e-13,1;CL:0002591,4.77e-13,1;CL:1000487,2.58e-07,2;CL:0002262,2.74e-07,2;CL:1000398,2.74e-07,2;CL:0002561,2.91e-07,2;CL:0002600,3.28e-07,2|ontology_enrichment_development_v019=UBERON:0008801;4.22e-13;1!UBERON:0004161;3.33e-10;11!UBERON:0009497;1.03e-08;13|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0001831;4.22e-13;1!UBERON:0001567;4.22e-13;1!UBERON:0002107;3.81e-10;19!UBERON:0006925;3.81e-10;19!UBERON:0002365;9.34e-09;31!UBERON:0002330;9.34e-09;31!UBERON:0002368;1.97e-08;33!UBERON:0002423;9.32e-08;25!UBERON:0001281;3.48e-07;2!UBERON:0003497;3.48e-07;2!UBERON:0003909;3.48e-07;2!UBERON:0001829;3.48e-07;2!UBERON:0000078;3.48e-07;2!UBERON:0003835;3.48e-07;2!UBERON:0005933;3.48e-07;2!UBERON:0002012;3.48e-07;2!UBERON:0005942;3.48e-07;2!UBERON:0004089;3.48e-07;2!UBERON:0008886;3.48e-07;2!UBERON:0005932;3.48e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0001831,8.64e-13,1;UBERON:0001567,8.64e-13,1;UBERON:0008801,8.64e-13,1;UBERON:0002107,3.08e-10,19;UBERON:0006925,3.08e-10,19;UBERON:0008836,3.08e-10,19;UBERON:0003929,4.55e-10,54;UBERON:0002365,1.97e-09,31;UBERON:0002330,1.97e-09,31;UBERON:0002530,3.92e-09,59;UBERON:0000949,4.23e-09,45;UBERON:0008835,7.19e-09,22;UBERON:0003894,7.19e-09,22;UBERON:0009854,1.72e-08,23;UBERON:0002368,2.50e-08,35;UBERON:0000490,3.78e-08,148;UBERON:0007499,7.94e-08,25;UBERON:0009497,7.94e-08,25;UBERON:0000015,7.94e-08,25;UBERON:0002423,7.94e-08,25;UBERON:0006235,7.94e-08,25;UBERON:0004161,7.94e-08,25;UBERON:0009856,1.56e-07,26;UBERON:0001281,2.74e-07,2;UBERON:0003497,2.74e-07,2;UBERON:0003909,2.74e-07,2;UBERON:0003835,2.74e-07,2;UBERON:0005933,2.91e-07,2;UBERON:0005942,2.91e-07,2;UBERON:0005932,2.91e-07,2;UBERON:0000078,3.70e-07,2;UBERON:0007497,3.70e-07,2;UBERON:0003643,3.70e-07,2;UBERON:0003504,3.70e-07,2;UBERON:0003469,3.70e-07,2;UBERON:0003496,3.70e-07,2;UBERON:0002012,3.70e-07,2;UBERON:0008886,3.70e-07,2;UBERON:0007303,3.70e-07,2;UBERON:0002061,3.70e-07,2;UBERON:0005432,3.70e-07,2;UBERON:0004363,3.70e-07,2;UBERON:0001829,4.98e-07,2;UBERON:0004089,4.98e-07,2;UBERON:0005256,9.07e-07,122|phase1_expression=0.363356758541113,0.642301571672949,0.140954404095971,0,0,0.872338524100369,0,0,0,0.245733936501509,0,0,0.263766978228454,0.495065411840187,0,0.672325146451775,0,0.730310090387373,0.487932798790507,0,0.204000691244253,0.626909442956176,0,0.273748850145768,0.125542639594803,0.0764134057479513,0,0.0787107813136792,0,0.383829398097213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0,0,0,0,0,0,0,0,0,1.12945403725563,0,0,0,0,0,0,0,0,0.290209238628584,0,0.622822248995575,0.251248665256743,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0.724232594804119,0,0.973269740605272,0.0945348171640679,0,0.263504357079378,0.196468613246569,0,0,0.324547393654683,0,0.26591592103773,0,0,0,0,0,0,0,0,1.10047216776027,0,0,0,0,0,0,0.24406205754817,0,0,0.267899184852239,0.22452937262617,0.225222960966644,0,0,0,0,0,0,0.496971951695318,0.379891534993739,0,0.286836620748814,0.354668382198357,0,0,0.49333509683432,0.311211035399766,0,0.163461903113459,0.151357427644931,0,0,0.312160076830321,0,0.597794722207204,0.117434498643765,0,0.140450806702248,0.204154171254893,0.368502951935304,0.516628905878827,0,0.741800787835671,0,0,0.168336113954066,0.375355559615893,0,0,0.919463387397059,0.300476117813194,0.113432183160021,0.358779271377724,0.427114777637135,0.211931901159562,0.300091096084402,0,0,0,0.675105328965065,0.0974370051611986,0,0.184099797284599,0.484938170456436,0.355009592516614,0,0,0,0,0,0,0,0,0.207322110030741,0,0,0,0.643240938192885,0,1.39310378409594,0.721879481669586,0.236613600079688,0.168584690078102,0,0.330881918197182,0,0.474541238222193,0.269662616320329,0.392442930250692,0.38474715694639,0,1.40241773803446,0,0,0,0,0,0,0.368965315629341,0.171567810298526,0,0,0.301586917234893,0.0925884451585296,0,0,0,0,0.117408694235822,0.144366447761074,0.462985512576611,0,0,0,0,0.234004265139238,0.297262324577456,0,0.16798212819886,0.141775097242386,0.0895585227028483,0,0,0.492663237895943,0.088048434013226,0,0,0,0,0,0,0,0.102827492703324,0,0.571652865261156,0,0,0.07333828582095,0,0,0.845302752556,0.26593811658487,1.04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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=6238 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=10448 | |||
|TSSclassifier=N | |||
|UniProt=Q9P2E9 | |||
|association_with_transcript=215bp_to_AF007575_5end | |||
|description=CAGE_peak_23_at_RRBP1_5end | |||
|id=chr20:17640391..17640408,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000182;6.49e-16;12!CL:0000228;4.22e-13;1!CL:0002372;4.22e-13;1!CL:0002591;4.22e-13;1!CL:0002262;3.48e-07;2!CL:0002561;3.48e-07;2!CL:1000398;3.48e-07;2!CL:1000487;3.48e-07;2!CL:0002600;3.48e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,4.59e-16,12;CL:0000228,2.06e-13,1;CL:0002372,2.06e-13,1;CL:0002591,4.77e-13,1;CL:1000487,2.58e-07,2;CL:0002262,2.74e-07,2;CL:1000398,2.74e-07,2;CL:0002561,2.91e-07,2;CL:0002600,3.28e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0008801;4.22e-13;1!UBERON:0004161;3.33e-10;11!UBERON:0009497;1.03e-08;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001831;4.22e-13;1!UBERON:0001567;4.22e-13;1!UBERON:0002107;3.81e-10;19!UBERON:0006925;3.81e-10;19!UBERON:0002365;9.34e-09;31!UBERON:0002330;9.34e-09;31!UBERON:0002368;1.97e-08;33!UBERON:0002423;9.32e-08;25!UBERON:0001281;3.48e-07;2!UBERON:0003497;3.48e-07;2!UBERON:0003909;3.48e-07;2!UBERON:0001829;3.48e-07;2!UBERON:0000078;3.48e-07;2!UBERON:0003835;3.48e-07;2!UBERON:0005933;3.48e-07;2!UBERON:0002012;3.48e-07;2!UBERON:0005942;3.48e-07;2!UBERON:0004089;3.48e-07;2!UBERON:0008886;3.48e-07;2!UBERON:0005932;3.48e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001831,8.64e-13,1;UBERON:0001567,8.64e-13,1;UBERON:0008801,8.64e-13,1;UBERON:0002107,3.08e-10,19;UBERON:0006925,3.08e-10,19;UBERON:0008836,3.08e-10,19;UBERON:0003929,4.55e-10,54;UBERON:0002365,1.97e-09,31;UBERON:0002330,1.97e-09,31;UBERON:0002530,3.92e-09,59;UBERON:0000949,4.23e-09,45;UBERON:0008835,7.19e-09,22;UBERON:0003894,7.19e-09,22;UBERON:0009854,1.72e-08,23;UBERON:0002368,2.50e-08,35;UBERON:0000490,3.78e-08,148;UBERON:0007499,7.94e-08,25;UBERON:0009497,7.94e-08,25;UBERON:0000015,7.94e-08,25;UBERON:0002423,7.94e-08,25;UBERON:0006235,7.94e-08,25;UBERON:0004161,7.94e-08,25;UBERON:0009856,1.56e-07,26;UBERON:0001281,2.74e-07,2;UBERON:0003497,2.74e-07,2;UBERON:0003909,2.74e-07,2;UBERON:0003835,2.74e-07,2;UBERON:0005933,2.91e-07,2;UBERON:0005942,2.91e-07,2;UBERON:0005932,2.91e-07,2;UBERON:0000078,3.70e-07,2;UBERON:0007497,3.70e-07,2;UBERON:0003643,3.70e-07,2;UBERON:0003504,3.70e-07,2;UBERON:0003469,3.70e-07,2;UBERON:0003496,3.70e-07,2;UBERON:0002012,3.70e-07,2;UBERON:0008886,3.70e-07,2;UBERON:0007303,3.70e-07,2;UBERON:0002061,3.70e-07,2;UBERON:0005432,3.70e-07,2;UBERON:0004363,3.70e-07,2;UBERON:0001829,4.98e-07,2;UBERON:0004089,4.98e-07,2;UBERON:0005256,9.07e-07,122 | |||
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| |||
|short_description=p23@RRBP1 | |||
}} |
Revision as of 07:35, 12 September 2013
Short description: | p23@RRBP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_23_at_RRBP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 215bp_to_AF007575_5end |
EntrezGene: | RRBP1 |
HGNC: | 10448 |
UniProt: | Q9P2E9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 4.59e-16 | 12 |
multinucleate cell | 2.06e-13 | 1 |
myotube | 2.06e-13 | 1 |
smooth muscle cell of the pulmonary artery | 4.77e-13 | 1 |
smooth muscle cell of prostate | 2.58e-07 | 2 |
endothelial cell of sinusoid | 2.74e-07 | 2 |
endothelial cell of hepatic sinusoid | 2.74e-07 | 2 |
outer root sheath cell | 2.91e-07 | 2 |
smooth muscle cell of trachea | 3.28e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.