FFCP PHASE1:Hg19::chr1:51763637..51763651,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=22996|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=18657|TSSclassifier=S|UniProt=|association_with_transcript=-5bp_to_ENST00000534098_5end|coexpression_cluster_id=C177|description=CAGE_peak_6_at_TTC39A_5end|id=chr1:51763637..51763651,-|ontology_enrichment_celltype=CL:0000325!3.54e-10!39;CL:0000148!1.97e-07!10;CL:0000541!1.97e-07!10;CL:0000136!6.89e-07!15|ontology_enrichment_celltype_v019=CL:0000136;3.50e-11;13!CL:0002535;4.01e-09;2|ontology_enrichment_celltype_v019_2=CL:0000136,8.65e-10,15;CL:0002535,4.02e-09,2|ontology_enrichment_development_v019=UBERON:0008425;5.52e-17;1!UBERON:0009117;4.66e-07;10!UBERON:0005564;4.66e-07;10|ontology_enrichment_disease=DOID:5093!3.27e-13!4;DOID:1612!3.27e-13!4;DOID:3119!1.47e-09!14|ontology_enrichment_disease_v019=DOID:1909;3.43e-09;2!DOID:3493;6.67e-09;2|ontology_enrichment_disease_v019_2=DOID:1909,3.43e-09,2;DOID:3493,8.09e-09,2|ontology_enrichment_uberon=UBERON:0007023!8.26e-11!115;UBERON:0000310!8.41e-11!10;UBERON:0001443!9.58e-10!11;UBERON:0000988!1.28e-09!3;UBERON:0002298!2.42e-09!8;UBERON:0004733!3.25e-08!12;UBERON:0002028!3.25e-08!12;UBERON:0007277!3.25e-08!12;UBERON:0002680!6.84e-08!9;UBERON:0001895!6.84e-08!9;UBERON:0010092!6.84e-08!9;UBERON:0004732!1.58e-07!13;UBERON:0002148!5.09e-07!2;UBERON:0009662!5.09e-07!2|ontology_enrichment_uberon_v019=UBERON:0006955;4.01e-09;2!UBERON:0004801;4.01e-09;2!UBERON:0000473;1.31e-08;8!UBERON:0000310;4.32e-07;10|ontology_enrichment_uberon_v019_2=UBERON:0006955,4.02e-09,2;UBERON:0004801,4.02e-09,2;UBERON:0000473,1.17e-08,8;UBERON:0000310,4.39e-07,10|phase1_expression=0.181678379270557,0,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30979075497713,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.444485260045183,0.381988425558278,1.17217447210047,0,0.308482478109971,0.600686115687835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,5.79445320064835,0,0,0,0,0,0,0,0,0,0,0,0,0.7812832832557,6.99679999969566,1.44999915086959,0,0,0,0.344743373241465,0,0,0,0,0,0.110579259931225,0.295547618953547,0,0,0,0.230850775511391,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19980960958213,0,0,0.343189995723929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788057072991982,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.258565912723101,0.66116300871345,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0.544017803369474,2.506898940227,1.53172788381731,1.63936315354902,0.157054096250234,0,0,0,0,0,0.434674820589684,0,0,14.4066661664565,0,0,0,0.579684114443301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138314504928436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591424344868181,0,0,0.206686796501184,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0.271878931907327,0.0657727735628491,0,0,0.078493092850514,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27595303699816,0,0,0,0,0,0,0,0,0,0,1.96251696636676,0,0,0.470317296361523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,1.74291005901951,2.67964130156179,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0|short_description=p6@TTC39A}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=22996 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18657 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-5bp_to_ENST00000534098_5end | |||
|coexpression_cluster_id=C177 | |||
|description=CAGE_peak_6_at_TTC39A_5end | |||
|id=chr1:51763637..51763651,- | |||
|ontology_enrichment_celltype=CL:0000325!3.54e-10!39;CL:0000148!1.97e-07!10;CL:0000541!1.97e-07!10;CL:0000136!6.89e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0000136;3.50e-11;13!CL:0002535;4.01e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,8.65e-10,15;CL:0002535,4.02e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0008425;5.52e-17;1!UBERON:0009117;4.66e-07;10!UBERON:0005564;4.66e-07;10 | |||
|ontology_enrichment_disease=DOID:5093!3.27e-13!4;DOID:1612!3.27e-13!4;DOID:3119!1.47e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:1909;3.43e-09;2!DOID:3493;6.67e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,3.43e-09,2;DOID:3493,8.09e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!8.26e-11!115;UBERON:0000310!8.41e-11!10;UBERON:0001443!9.58e-10!11;UBERON:0000988!1.28e-09!3;UBERON:0002298!2.42e-09!8;UBERON:0004733!3.25e-08!12;UBERON:0002028!3.25e-08!12;UBERON:0007277!3.25e-08!12;UBERON:0002680!6.84e-08!9;UBERON:0001895!6.84e-08!9;UBERON:0010092!6.84e-08!9;UBERON:0004732!1.58e-07!13;UBERON:0002148!5.09e-07!2;UBERON:0009662!5.09e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0006955;4.01e-09;2!UBERON:0004801;4.01e-09;2!UBERON:0000473;1.31e-08;8!UBERON:0000310;4.32e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,4.02e-09,2;UBERON:0004801,4.02e-09,2;UBERON:0000473,1.17e-08,8;UBERON:0000310,4.39e-07,10 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30979075497713,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.444485260045183,0.381988425558278,1.17217447210047,0,0.308482478109971,0.600686115687835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,5.79445320064835,0,0,0,0,0,0,0,0,0,0,0,0,0.7812832832557,6.99679999969566,1.44999915086959,0,0,0,0.344743373241465,0,0,0,0,0,0.110579259931225,0.295547618953547,0,0,0,0.230850775511391,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19980960958213,0,0,0.343189995723929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788057072991982,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.258565912723101,0.66116300871345,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0.544017803369474,2.506898940227,1.53172788381731,1.63936315354902,0.157054096250234,0,0,0,0,0,0.434674820589684,0,0,14.4066661664565,0,0,0,0.579684114443301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138314504928436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591424344868181,0,0,0.206686796501184,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0.271878931907327,0.0657727735628491,0,0,0.078493092850514,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27595303699816,0,0,0,0,0,0,0,0,0,0,1.96251696636676,0,0,0.470317296361523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,1.74291005901951,2.67964130156179,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p6@TTC39A | |||
}} |
Revision as of 06:04, 12 September 2013
Short description: | p6@TTC39A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_TTC39A_5end |
Coexpression cluster: | C177_melanoma_Melanocyte_mesenchymal_retina_Mallassezderived_Gingival_squamous |
Association with transcript: | -5bp_to_ENST00000534098_5end |
EntrezGene: | TTC39A |
HGNC: | 18657 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 8.65e-10 | 15 |
epithelial cell of cervix | 4.02e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 4.02e-09 | 2 |
cervix epithelium | 4.02e-09 | 2 |
testis | 1.17e-08 | 8 |
breast | 4.39e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
melanoma | 3.43e-09 | 2 |
signet ring cell adenocarcinoma | 8.09e-09 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.