FFCP PHASE1:Hg19::chr1:215178858..215178873,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3776|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6277|TSSclassifier=S|UniProt=O95069,Q6ZW95|association_with_transcript=-11bp_to_NM_001017424,uc001hko.2,uc001hkp.2,uc009xdm.2_5end|coexpression_cluster_id=C633|description=CAGE_peak_17_at_KCNK2_5end|id=chr1:215178858..215178873,+|ontology_enrichment_celltype=CL:0000057!6.21e-29!75;CL:0002620!1.14e-19!23;CL:0000055!7.79e-17!180;CL:0002334!4.51e-14!12;CL:1000306!7.40e-08!4;CL:0002547!7.40e-08!4;CL:0002580!9.01e-07!3|ontology_enrichment_celltype_v019=CL:0000197;1.20e-15;6!CL:0000098;1.20e-15;6!CL:0002167;1.20e-15;6!CL:0002620;6.23e-14;23!CL:0002617;4.67e-12;2!CL:0002570;3.47e-11;8!CL:0002556;4.86e-09;6!CL:0002580;2.54e-08;3!CL:0000057;3.17e-08;73!CL:0000135;5.24e-08;3!CL:0000346;5.24e-08;3!CL:1000428;5.24e-08;3!CL:0000388;5.24e-08;3!CL:0002334;2.22e-07;12!CL:0000228;5.89e-07;1!CL:0002372;5.89e-07;1|ontology_enrichment_celltype_v019_2=CL:0000057,3.49e-24,76;CL:0000197,1.20e-15,6;CL:0000098,1.20e-15,6;CL:0002167,1.20e-15,6;CL:0002620,6.96e-14,23;CL:0002617,3.96e-12,2;CL:0002570,6.24e-11,8;CL:0002556,5.43e-09,6;CL:0002580,1.83e-08,3;CL:0000346,4.23e-08,3;CL:1000428,4.23e-08,3;CL:0000135,4.55e-08,3;CL:0000388,4.55e-08,3;CL:0002334,1.84e-07,12;CL:0000228,4.97e-07,1;CL:0002372,4.97e-07,1;CL:0000134,6.50e-07,354|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:17!2.84e-10!5;DOID:450!2.84e-10!5;DOID:66!2.84e-10!5;DOID:423!2.84e-10!5;DOID:0080000!2.84e-10!5;DOID:11722!2.84e-10!5|ontology_enrichment_disease_v019=DOID:17;7.27e-18;5!DOID:450;7.27e-18;5!DOID:66;7.27e-18;5!DOID:423;7.27e-18;5!DOID:0080000;7.27e-18;5!DOID:11722;7.27e-18;5|ontology_enrichment_disease_v019_2=DOID:17,6.13e-18,5;DOID:450,6.13e-18,5;DOID:66,6.13e-18,5;DOID:423,6.13e-18,5;DOID:0080000,6.13e-18,5;DOID:11722,6.13e-18,5|ontology_enrichment_uberon=UBERON:0002199!9.61e-16!45;UBERON:0002416!9.61e-16!45;UBERON:0002097!2.79e-15!40;UBERON:0003102!1.44e-11!95;UBERON:0000475!6.35e-08!365;UBERON:0000415!7.40e-08!4;UBERON:0007240!7.40e-08!4;UBERON:0005742!7.40e-08!4;UBERON:0005734!7.40e-08!4;UBERON:0004664!7.40e-08!4;UBERON:0004663!7.40e-08!4;UBERON:0003688!1.15e-07!6;UBERON:0002358!1.15e-07!6;UBERON:0003684!1.15e-07!6;UBERON:0001178!1.15e-07!6|ontology_enrichment_uberon_v019=UBERON:0002097;5.02e-12;41!UBERON:0002199;1.39e-09;46!UBERON:0002416;1.39e-09;46!UBERON:0001758;4.86e-09;6!UBERON:0003672;4.86e-09;6!UBERON:0000310;5.05e-09;10!UBERON:0001443;3.29e-08;11!UBERON:0007846;5.24e-08;3!UBERON:0000043;5.24e-08;3!UBERON:0007845;5.24e-08;3!UBERON:0000412;5.24e-08;3!UBERON:0001992;5.24e-08;3!UBERON:0003129;8.29e-08;7|ontology_enrichment_uberon_v019_2=UBERON:0002097,8.73e-14,41;UBERON:0002199,4.61e-12,46;UBERON:0002416,4.61e-12,46;UBERON:0000310,3.93e-09,10;UBERON:0003102,4.08e-09,99;UBERON:0001758,5.43e-09,6;UBERON:0003672,5.43e-09,6;UBERON:0001443,2.62e-08,11;UBERON:0000412,4.23e-08,3;UBERON:0001992,4.23e-08,3;UBERON:0007846,4.55e-08,3;UBERON:0000043,4.55e-08,3;UBERON:0007845,4.55e-08,3;UBERON:0003129,9.11e-08,7|phase1_expression=3.45188920614058,1.49870366723688,0.704772020479856,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.144846518960824,0,0.486634870302636,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.759783069987479,0.132409180813219,1.72101972449288,2.12801029319014,0,0,0,0,0,0,0,0,0,0,0,0.298897361103602,0.23486899728753,0,0,0,0.122834317311768,0,1.18800285728205,0,0,0,0,0,0.277064115484183,3.07284334616587,7.66219489497549,1.20190447125277,0,1.61450672119976,4.48470516518992,2.11931901159562,0.600182192168805,1.23663035086127,1.03056216018252,1.11670113798954,1.35021065793013,0.876933046450788,0.757301322732344,2.76149695926898,0.484938170456436,0.710019185033229,0.806016785821122,0.339121184620975,0,0,0,0,0,0,0,0,0,1.56449532329816,1.28648187638577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0.22001485746285,0,0,0,0.531876233169741,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,2.85273810081437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07970861530807,6.78030157429215,3.94256037584837,5.38850508966481,0,0,0,0,0.368738337083406,0.60818530127658,0,0,0,0,0,0,0,0,3.72161711728165,0.61384789315225,1.68396056659844,0.512556597022804,1.53512174720011,0.965123526861645,0,0.308419387605311,0.355123450626254,1.23190734020714,0,0.929683027679674,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.580024309752732,0,0,0,0,0,0,0.979352392114111,0,0,0,0,0.929691098594572,0.62962469366128,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3776 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6277 | |||
|TSSclassifier=S | |||
|UniProt=O95069,Q6ZW95 | |||
|association_with_transcript=-11bp_to_NM_001017424,uc001hko.2,uc001hkp.2,uc009xdm.2_5end | |||
|coexpression_cluster_id=C633 | |||
|description=CAGE_peak_17_at_KCNK2_5end | |||
|id=chr1:215178858..215178873,+ | |||
|ontology_enrichment_celltype=CL:0000057!6.21e-29!75;CL:0002620!1.14e-19!23;CL:0000055!7.79e-17!180;CL:0002334!4.51e-14!12;CL:1000306!7.40e-08!4;CL:0002547!7.40e-08!4;CL:0002580!9.01e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000197;1.20e-15;6!CL:0000098;1.20e-15;6!CL:0002167;1.20e-15;6!CL:0002620;6.23e-14;23!CL:0002617;4.67e-12;2!CL:0002570;3.47e-11;8!CL:0002556;4.86e-09;6!CL:0002580;2.54e-08;3!CL:0000057;3.17e-08;73!CL:0000135;5.24e-08;3!CL:0000346;5.24e-08;3!CL:1000428;5.24e-08;3!CL:0000388;5.24e-08;3!CL:0002334;2.22e-07;12!CL:0000228;5.89e-07;1!CL:0002372;5.89e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.49e-24,76;CL:0000197,1.20e-15,6;CL:0000098,1.20e-15,6;CL:0002167,1.20e-15,6;CL:0002620,6.96e-14,23;CL:0002617,3.96e-12,2;CL:0002570,6.24e-11,8;CL:0002556,5.43e-09,6;CL:0002580,1.83e-08,3;CL:0000346,4.23e-08,3;CL:1000428,4.23e-08,3;CL:0000135,4.55e-08,3;CL:0000388,4.55e-08,3;CL:0002334,1.84e-07,12;CL:0000228,4.97e-07,1;CL:0002372,4.97e-07,1;CL:0000134,6.50e-07,354 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!2.84e-10!5;DOID:450!2.84e-10!5;DOID:66!2.84e-10!5;DOID:423!2.84e-10!5;DOID:0080000!2.84e-10!5;DOID:11722!2.84e-10!5 | |||
|ontology_enrichment_disease_v019=DOID:17;7.27e-18;5!DOID:450;7.27e-18;5!DOID:66;7.27e-18;5!DOID:423;7.27e-18;5!DOID:0080000;7.27e-18;5!DOID:11722;7.27e-18;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,6.13e-18,5;DOID:450,6.13e-18,5;DOID:66,6.13e-18,5;DOID:423,6.13e-18,5;DOID:0080000,6.13e-18,5;DOID:11722,6.13e-18,5 | |||
|ontology_enrichment_uberon=UBERON:0002199!9.61e-16!45;UBERON:0002416!9.61e-16!45;UBERON:0002097!2.79e-15!40;UBERON:0003102!1.44e-11!95;UBERON:0000475!6.35e-08!365;UBERON:0000415!7.40e-08!4;UBERON:0007240!7.40e-08!4;UBERON:0005742!7.40e-08!4;UBERON:0005734!7.40e-08!4;UBERON:0004664!7.40e-08!4;UBERON:0004663!7.40e-08!4;UBERON:0003688!1.15e-07!6;UBERON:0002358!1.15e-07!6;UBERON:0003684!1.15e-07!6;UBERON:0001178!1.15e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;5.02e-12;41!UBERON:0002199;1.39e-09;46!UBERON:0002416;1.39e-09;46!UBERON:0001758;4.86e-09;6!UBERON:0003672;4.86e-09;6!UBERON:0000310;5.05e-09;10!UBERON:0001443;3.29e-08;11!UBERON:0007846;5.24e-08;3!UBERON:0000043;5.24e-08;3!UBERON:0007845;5.24e-08;3!UBERON:0000412;5.24e-08;3!UBERON:0001992;5.24e-08;3!UBERON:0003129;8.29e-08;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,8.73e-14,41;UBERON:0002199,4.61e-12,46;UBERON:0002416,4.61e-12,46;UBERON:0000310,3.93e-09,10;UBERON:0003102,4.08e-09,99;UBERON:0001758,5.43e-09,6;UBERON:0003672,5.43e-09,6;UBERON:0001443,2.62e-08,11;UBERON:0000412,4.23e-08,3;UBERON:0001992,4.23e-08,3;UBERON:0007846,4.55e-08,3;UBERON:0000043,4.55e-08,3;UBERON:0007845,4.55e-08,3;UBERON:0003129,9.11e-08,7 | |||
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|short_description=p17@KCNK2 | |||
}} |
Revision as of 03:35, 12 September 2013
Short description: | p17@KCNK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_17_at_KCNK2_5end |
Coexpression cluster: | C633_Olfactory_Fibroblast_Preadipocyte_Hair_tenocyte_mesenchymal_basal |
Association with transcript: | -11bp_to_NM_001017424, uc001hko.2, uc001hkp.2, uc009xdm.2_5end |
EntrezGene: | KCNK2 |
HGNC: | 6277 |
UniProt: | O95069Q6ZW95 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.49e-24 | 76 |
receptor cell | 1.20e-15 | 6 |
sensory epithelial cell | 1.20e-15 | 6 |
olfactory epithelial cell | 1.20e-15 | 6 |
skin fibroblast | 6.96e-14 | 23 |
adipocyte of breast | 3.96e-12 | 2 |
mesenchymal stem cell of adipose | 6.24e-11 | 8 |
fibroblast of periodontium | 5.43e-09 | 6 |
preadipocyte of the breast | 1.83e-08 | 3 |
hair follicle dermal papilla cell | 4.23e-08 | 3 |
stem cell of epidermis | 4.23e-08 | 3 |
fibrocyte | 4.55e-08 | 3 |
tendon cell | 4.55e-08 | 3 |
preadipocyte | 1.84e-07 | 12 |
multinucleate cell | 4.97e-07 | 1 |
myotube | 4.97e-07 | 1 |
mesenchymal cell | 6.50e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
skin of body | 8.73e-14 | 41 |
integument | 4.61e-12 | 46 |
integumental system | 4.61e-12 | 46 |
breast | 3.93e-09 | 10 |
surface structure | 4.08e-09 | 99 |
periodontium | 5.43e-09 | 6 |
dentition | 5.43e-09 | 6 |
chest | 2.62e-08 | 11 |
dermal papilla | 4.23e-08 | 3 |
papillary layer of dermis | 4.23e-08 | 3 |
dense regular connective tissue | 4.55e-08 | 3 |
tendon | 4.55e-08 | 3 |
regular connective tissue | 4.55e-08 | 3 |
skull | 9.11e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 6.13e-18 | 5 |
myotonic disease | 6.13e-18 | 5 |
muscle tissue disease | 6.13e-18 | 5 |
myopathy | 6.13e-18 | 5 |
muscular disease | 6.13e-18 | 5 |
myotonic dystrophy | 6.13e-18 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.