FFCP PHASE1:Hg19::chr1:215178726..215178743,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3776|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6277|TSSclassifier=W|UniProt=O95069,Q6ZW95|association_with_transcript=-141bp_to_NM_001017424,uc001hko.2,uc001hkp.2,uc009xdm.2_5end|coexpression_cluster_id=C633|description=CAGE_peak_24_at_KCNK2_5end|id=chr1:215178726..215178743,+|ontology_enrichment_celltype=CL:0000057!6.30e-36!75;CL:0002620!2.70e-23!23;CL:0002334!6.13e-21!12;CL:0000055!1.98e-18!180;CL:1000306!2.93e-12!4;CL:0002547!2.93e-12!4;CL:0002579!1.64e-09!3;CL:0002580!6.01e-09!3;CL:0000048!3.24e-08!430;CL:0000197!3.32e-08!6;CL:0000098!3.32e-08!6;CL:0002167!3.32e-08!6;CL:0000723!6.47e-08!436;CL:0000134!1.21e-07!358;CL:0000034!1.58e-07!444;CL:0002320!2.84e-07!365|ontology_enrichment_celltype_v019=CL:0000197;1.49e-18;6!CL:0000098;1.49e-18;6!CL:0002167;1.49e-18;6!CL:0002579;8.88e-17;3!CL:1000306;1.23e-12;4!CL:0002547;1.23e-12;4!CL:0002334;1.95e-09;12!CL:0002620;2.30e-08;23!CL:0002570;9.37e-07;8|ontology_enrichment_celltype_v019_2=CL:0000197,1.02e-18,6;CL:0000098,1.02e-18,6;CL:0002167,1.02e-18,6;CL:0002579,8.55e-17,3;CL:0000057,3.95e-14,76;CL:1000306,7.26e-13,4;CL:0002547,7.26e-13,4;CL:0002334,2.20e-09,12;CL:0002620,2.59e-08,23|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:17!5.40e-14!5;DOID:450!5.40e-14!5;DOID:66!5.40e-14!5;DOID:423!5.40e-14!5;DOID:0080000!5.40e-14!5;DOID:11722!5.40e-14!5|ontology_enrichment_disease_v019=DOID:17;2.71e-10;5!DOID:450;2.71e-10;5!DOID:66;2.71e-10;5!DOID:423;2.71e-10;5!DOID:0080000;2.71e-10;5!DOID:11722;2.71e-10;5|ontology_enrichment_disease_v019_2=DOID:17,3.27e-10,5;DOID:450,3.27e-10,5;DOID:66,3.27e-10,5;DOID:423,3.27e-10,5;DOID:0080000,3.27e-10,5;DOID:11722,3.27e-10,5|ontology_enrichment_uberon=UBERON:0002199!4.20e-17!45;UBERON:0002416!4.20e-17!45;UBERON:0002097!1.24e-15!40;UBERON:0000415!2.93e-12!4;UBERON:0007240!2.93e-12!4;UBERON:0005742!2.93e-12!4;UBERON:0005734!2.93e-12!4;UBERON:0004664!2.93e-12!4;UBERON:0004663!2.93e-12!4;UBERON:0003102!3.18e-10!95;UBERON:0002384!1.79e-08!375;UBERON:0003688!5.04e-08!6;UBERON:0002358!5.04e-08!6;UBERON:0003684!5.04e-08!6;UBERON:0001178!5.04e-08!6|ontology_enrichment_uberon_v019=UBERON:0007195;5.06e-13;1!UBERON:0004797;1.23e-12;4!UBERON:0000415;1.23e-12;4!UBERON:0007240;1.23e-12;4!UBERON:0005742;1.23e-12;4!UBERON:0005734;1.23e-12;4!UBERON:0004664;1.23e-12;4!UBERON:0004663;1.23e-12;4!UBERON:0003688;7.46e-09;6!UBERON:0002358;7.46e-09;6!UBERON:0003684;7.46e-09;6!UBERON:0001178;7.46e-09;6|ontology_enrichment_uberon_v019_2=UBERON:0000415,7.26e-13,4;UBERON:0007240,7.26e-13,4;UBERON:0005742,7.26e-13,4;UBERON:0005734,7.26e-13,4;UBERON:0004664,7.26e-13,4;UBERON:0004663,7.26e-13,4;UBERON:0007195,9.73e-13,1;UBERON:0003688,7.33e-09,6;UBERON:0002358,7.33e-09,6;UBERON:0003684,7.33e-09,6;UBERON:0001178,7.33e-09,6;UBERON:0004797,9.88e-08,7;UBERON:0002097,5.06e-07,41|phase1_expression=0.181678379270557,0,0.845726424575827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0.886413581652058,1.98613771219828,1.72101972449288,0.709336764396714,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0.877955241761676,1.83892677479412,0.751190294532984,0,0.538168907066586,1.2813443329114,1.27159140695737,0.300091096084402,0.515262646192195,0.772921620136887,0.18611685633159,0.675105328965065,0.584622030967192,1.26216887122057,1.47279837827679,0,0.710019185033229,0.302256294682921,0.508681776931463,0,0,0,0,0,0,0,0,0,1.56449532329816,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.823240336780769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,6.78030157429215,3.15404830067869,1.99140405487612,0,0,0,0,0.184369168541703,0.434418072340414,0,0,0,0,0,0,0,0,1.24053903909388,0.61384789315225,0.280660094433074,1.40953064181271,2.04682899626681,0.482561763430822,0,0.308419387605311,0.532685175939381,0.410635780069046,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193341436584244,0,0,0,0,0,0,0,0,0,0,0,0.464845549297286,0,0,0,0,0,0.18532421910392,0,0,0,0.190630193923825,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622079175323615,0,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227884111694002,0,0,0,0,0.366390373607449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0.063186579628488,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3776 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6277 | |||
|TSSclassifier=W | |||
|UniProt=O95069,Q6ZW95 | |||
|association_with_transcript=-141bp_to_NM_001017424,uc001hko.2,uc001hkp.2,uc009xdm.2_5end | |||
|coexpression_cluster_id=C633 | |||
|description=CAGE_peak_24_at_KCNK2_5end | |||
|id=chr1:215178726..215178743,+ | |||
|ontology_enrichment_celltype=CL:0000057!6.30e-36!75;CL:0002620!2.70e-23!23;CL:0002334!6.13e-21!12;CL:0000055!1.98e-18!180;CL:1000306!2.93e-12!4;CL:0002547!2.93e-12!4;CL:0002579!1.64e-09!3;CL:0002580!6.01e-09!3;CL:0000048!3.24e-08!430;CL:0000197!3.32e-08!6;CL:0000098!3.32e-08!6;CL:0002167!3.32e-08!6;CL:0000723!6.47e-08!436;CL:0000134!1.21e-07!358;CL:0000034!1.58e-07!444;CL:0002320!2.84e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000197;1.49e-18;6!CL:0000098;1.49e-18;6!CL:0002167;1.49e-18;6!CL:0002579;8.88e-17;3!CL:1000306;1.23e-12;4!CL:0002547;1.23e-12;4!CL:0002334;1.95e-09;12!CL:0002620;2.30e-08;23!CL:0002570;9.37e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000197,1.02e-18,6;CL:0000098,1.02e-18,6;CL:0002167,1.02e-18,6;CL:0002579,8.55e-17,3;CL:0000057,3.95e-14,76;CL:1000306,7.26e-13,4;CL:0002547,7.26e-13,4;CL:0002334,2.20e-09,12;CL:0002620,2.59e-08,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!5.40e-14!5;DOID:450!5.40e-14!5;DOID:66!5.40e-14!5;DOID:423!5.40e-14!5;DOID:0080000!5.40e-14!5;DOID:11722!5.40e-14!5 | |||
|ontology_enrichment_disease_v019=DOID:17;2.71e-10;5!DOID:450;2.71e-10;5!DOID:66;2.71e-10;5!DOID:423;2.71e-10;5!DOID:0080000;2.71e-10;5!DOID:11722;2.71e-10;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,3.27e-10,5;DOID:450,3.27e-10,5;DOID:66,3.27e-10,5;DOID:423,3.27e-10,5;DOID:0080000,3.27e-10,5;DOID:11722,3.27e-10,5 | |||
|ontology_enrichment_uberon=UBERON:0002199!4.20e-17!45;UBERON:0002416!4.20e-17!45;UBERON:0002097!1.24e-15!40;UBERON:0000415!2.93e-12!4;UBERON:0007240!2.93e-12!4;UBERON:0005742!2.93e-12!4;UBERON:0005734!2.93e-12!4;UBERON:0004664!2.93e-12!4;UBERON:0004663!2.93e-12!4;UBERON:0003102!3.18e-10!95;UBERON:0002384!1.79e-08!375;UBERON:0003688!5.04e-08!6;UBERON:0002358!5.04e-08!6;UBERON:0003684!5.04e-08!6;UBERON:0001178!5.04e-08!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0007195;5.06e-13;1!UBERON:0004797;1.23e-12;4!UBERON:0000415;1.23e-12;4!UBERON:0007240;1.23e-12;4!UBERON:0005742;1.23e-12;4!UBERON:0005734;1.23e-12;4!UBERON:0004664;1.23e-12;4!UBERON:0004663;1.23e-12;4!UBERON:0003688;7.46e-09;6!UBERON:0002358;7.46e-09;6!UBERON:0003684;7.46e-09;6!UBERON:0001178;7.46e-09;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000415,7.26e-13,4;UBERON:0007240,7.26e-13,4;UBERON:0005742,7.26e-13,4;UBERON:0005734,7.26e-13,4;UBERON:0004664,7.26e-13,4;UBERON:0004663,7.26e-13,4;UBERON:0007195,9.73e-13,1;UBERON:0003688,7.33e-09,6;UBERON:0002358,7.33e-09,6;UBERON:0003684,7.33e-09,6;UBERON:0001178,7.33e-09,6;UBERON:0004797,9.88e-08,7;UBERON:0002097,5.06e-07,41 | |||
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|short_description=p24@KCNK2 | |||
}} |
Revision as of 03:35, 12 September 2013
Short description: | p24@KCNK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_24_at_KCNK2_5end |
Coexpression cluster: | C633_Olfactory_Fibroblast_Preadipocyte_Hair_tenocyte_mesenchymal_basal |
Association with transcript: | -141bp_to_NM_001017424, uc001hko.2, uc001hkp.2, uc009xdm.2_5end |
EntrezGene: | KCNK2 |
HGNC: | 6277 |
UniProt: | O95069Q6ZW95 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
receptor cell | 1.02e-18 | 6 |
sensory epithelial cell | 1.02e-18 | 6 |
olfactory epithelial cell | 1.02e-18 | 6 |
omentum preadipocyte | 8.55e-17 | 3 |
fibroblast | 3.95e-14 | 76 |
fibroblast of tunica adventitia of artery | 7.26e-13 | 4 |
fibroblast of the aortic adventitia | 7.26e-13 | 4 |
preadipocyte | 2.20e-09 | 12 |
skin fibroblast | 2.59e-08 | 23 |
Ontology term | p-value | n |
---|---|---|
artery wall | 7.26e-13 | 4 |
tunica adventitia of artery | 7.26e-13 | 4 |
adventitia | 7.26e-13 | 4 |
tunica adventitia of blood vessel | 7.26e-13 | 4 |
aorta tunica adventitia | 7.26e-13 | 4 |
aorta wall | 7.26e-13 | 4 |
stroma of bone marrow | 9.73e-13 | 1 |
omentum | 7.33e-09 | 6 |
peritoneum | 7.33e-09 | 6 |
abdominal cavity | 7.33e-09 | 6 |
visceral peritoneum | 7.33e-09 | 6 |
blood vessel layer | 9.88e-08 | 7 |
skin of body | 5.06e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 3.27e-10 | 5 |
myotonic disease | 3.27e-10 | 5 |
muscle tissue disease | 3.27e-10 | 5 |
myopathy | 3.27e-10 | 5 |
muscular disease | 3.27e-10 | 5 |
myotonic dystrophy | 3.27e-10 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.