FFCP PHASE1:Hg19::chr1:215178636..215178662,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3776|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6277|TSSclassifier=N|UniProt=O95069,Q6ZW95|association_with_transcript=-222bp_to_NM_001017424,uc001hko.2,uc001hkp.2,uc009xdm.2_5end|coexpression_cluster_id=C633|description=CAGE_peak_5_at_KCNK2_5end|id=chr1:215178636..215178662,+|ontology_enrichment_celltype=CL:0000057!6.90e-36!75;CL:0000055!1.77e-30!180;CL:0002620!6.98e-23!23;CL:0002334!2.46e-17!12;CL:0000048!5.57e-13!430;CL:0000723!1.82e-12!436;CL:0000034!8.34e-12!444;CL:0002556!1.49e-09!6;CL:1000306!1.54e-08!4;CL:0002547!1.54e-08!4;CL:0000134!6.35e-08!358;CL:0002559!6.96e-08!4;CL:0002371!1.68e-07!591;CL:0002320!1.95e-07!365;CL:0000219!6.34e-07!390;CL:0002579!8.54e-07!3;CL:0000680!9.40e-07!57;CL:0000056!9.40e-07!57;CL:0000355!9.40e-07!57|ontology_enrichment_celltype_v019=CL:0002334;2.47e-25;12!CL:0002620;1.53e-23;23!CL:1000306;5.20e-14;4!CL:0002547;5.20e-14;4!CL:0000057;5.58e-13;73!CL:0002579;6.07e-11;3!CL:0000346;2.08e-10;3!CL:1000428;2.08e-10;3!CL:0002559;2.41e-10;5!CL:0002570;3.43e-10;8!CL:0002580;5.79e-10;3!CL:0000197;3.01e-09;6!CL:0000098;3.01e-09;6!CL:0002167;3.01e-09;6!CL:0002583;1.67e-07;2!CL:0002617;6.17e-07;2!CL:0002320;7.11e-07;188|ontology_enrichment_celltype_v019_2=CL:0000057,3.67e-40,76;CL:0002334,1.86e-25,12;CL:0002620,1.26e-23,23;CL:1000306,5.05e-14,4;CL:0002547,5.05e-14,4;CL:0000134,1.97e-11,354;CL:0002320,5.53e-11,361;CL:0002579,6.38e-11,3;CL:0000048,1.08e-10,427;CL:0000346,2.18e-10,3;CL:1000428,2.18e-10,3;CL:0000723,2.27e-10,433;CL:0002559,2.70e-10,5;CL:0002570,3.71e-10,8;CL:0000219,3.86e-10,386;CL:0002580,4.24e-10,3;CL:0000034,5.94e-10,441;CL:0000197,3.27e-09,6;CL:0000098,3.27e-09,6;CL:0002167,3.27e-09,6;CL:0002583,1.51e-07,2;CL:0002617,6.67e-07,2|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:17!1.11e-09!5;DOID:450!1.11e-09!5;DOID:66!1.11e-09!5;DOID:423!1.11e-09!5;DOID:0080000!1.11e-09!5;DOID:11722!1.11e-09!5|ontology_enrichment_disease_v019=DOID:17;4.57e-16;5!DOID:450;4.57e-16;5!DOID:66;4.57e-16;5!DOID:423;4.57e-16;5!DOID:0080000;4.57e-16;5!DOID:11722;4.57e-16;5|ontology_enrichment_disease_v019_2=DOID:17,4.65e-16,5;DOID:450,4.65e-16,5;DOID:66,4.65e-16,5;DOID:423,4.65e-16,5;DOID:0080000,4.65e-16,5;DOID:11722,4.65e-16,5|ontology_enrichment_uberon=UBERON:0002199!1.26e-19!45;UBERON:0002416!1.26e-19!45;UBERON:0002097!5.23e-19!40;UBERON:0003102!2.26e-16!95;UBERON:0000914!1.13e-12!83;UBERON:0002329!1.13e-12!83;UBERON:0003077!1.13e-12!83;UBERON:0003059!1.13e-12!83;UBERON:0007282!1.13e-12!83;UBERON:0009618!1.13e-12!83;UBERON:0007285!1.13e-12!83;UBERON:0004290!4.42e-10!70;UBERON:0001758!1.49e-09!6;UBERON:0003672!1.49e-09!6;UBERON:0000415!1.54e-08!4;UBERON:0007240!1.54e-08!4;UBERON:0005742!1.54e-08!4;UBERON:0005734!1.54e-08!4;UBERON:0004664!1.54e-08!4;UBERON:0004663!1.54e-08!4;UBERON:0000486!2.44e-08!82;UBERON:0002067!3.96e-08!9;UBERON:0004016!3.96e-08!9;UBERON:0010083!3.96e-08!9;UBERON:0002384!4.14e-08!375;UBERON:0000475!4.65e-08!365;UBERON:0002073!6.96e-08!4;UBERON:0005086!6.96e-08!4|ontology_enrichment_uberon_v019=UBERON:0002097;2.46e-18;41!UBERON:0002199;3.44e-15;46!UBERON:0002416;3.44e-15;46!UBERON:0004797;5.20e-14;4!UBERON:0000415;5.20e-14;4!UBERON:0007240;5.20e-14;4!UBERON:0005742;5.20e-14;4!UBERON:0005734;5.20e-14;4!UBERON:0004664;5.20e-14;4!UBERON:0004663;5.20e-14;4!UBERON:0003102;5.61e-13;50!UBERON:0000412;2.08e-10;3!UBERON:0001992;2.08e-10;3!UBERON:0002073;2.41e-10;5!UBERON:0003688;5.81e-09;6!UBERON:0002358;5.81e-09;6!UBERON:0003684;5.81e-09;6!UBERON:0001178;5.81e-09;6!UBERON:0000310;1.88e-07;10!UBERON:0002384;3.91e-07;198!UBERON:0001443;9.58e-07;11|ontology_enrichment_uberon_v019_2=UBERON:0002199,7.90e-25,46;UBERON:0002416,7.90e-25,46;UBERON:0002097,7.40e-23,41;UBERON:0000415,5.05e-14,4;UBERON:0007240,5.05e-14,4;UBERON:0005742,5.05e-14,4;UBERON:0005734,5.05e-14,4;UBERON:0004664,5.05e-14,4;UBERON:0004663,5.05e-14,4;UBERON:0003102,2.65e-13,99;UBERON:0002384,4.36e-11,371;UBERON:0000412,2.18e-10,3;UBERON:0001992,2.18e-10,3;UBERON:0002073,2.70e-10,5;UBERON:0005086,2.70e-10,5;UBERON:0003688,6.80e-09,6;UBERON:0002358,6.80e-09,6;UBERON:0003684,6.80e-09,6;UBERON:0001178,6.80e-09,6;UBERON:0004797,5.36e-08,7;UBERON:0000310,1.69e-07,10;UBERON:0001443,8.69e-07,11|phase1_expression=2.90685406832891,1.07050261945492,1.12763523276777,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98788780678127,5.95163404823525,18.5372853138506,14.9155042789383,2.4826786753885,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0.149448680551801,0,0.161872944368132,0.140450806702248,0,0,0,2.37600571456411,0.494533858557114,0,0,0.336672227908132,0.125118519871964,0.554128230968366,2.19488810440419,4.29082914118628,1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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3776 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6277 | |||
|TSSclassifier=N | |||
|UniProt=O95069,Q6ZW95 | |||
|association_with_transcript=-222bp_to_NM_001017424,uc001hko.2,uc001hkp.2,uc009xdm.2_5end | |||
|coexpression_cluster_id=C633 | |||
|description=CAGE_peak_5_at_KCNK2_5end | |||
|id=chr1:215178636..215178662,+ | |||
|ontology_enrichment_celltype=CL:0000057!6.90e-36!75;CL:0000055!1.77e-30!180;CL:0002620!6.98e-23!23;CL:0002334!2.46e-17!12;CL:0000048!5.57e-13!430;CL:0000723!1.82e-12!436;CL:0000034!8.34e-12!444;CL:0002556!1.49e-09!6;CL:1000306!1.54e-08!4;CL:0002547!1.54e-08!4;CL:0000134!6.35e-08!358;CL:0002559!6.96e-08!4;CL:0002371!1.68e-07!591;CL:0002320!1.95e-07!365;CL:0000219!6.34e-07!390;CL:0002579!8.54e-07!3;CL:0000680!9.40e-07!57;CL:0000056!9.40e-07!57;CL:0000355!9.40e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0002334;2.47e-25;12!CL:0002620;1.53e-23;23!CL:1000306;5.20e-14;4!CL:0002547;5.20e-14;4!CL:0000057;5.58e-13;73!CL:0002579;6.07e-11;3!CL:0000346;2.08e-10;3!CL:1000428;2.08e-10;3!CL:0002559;2.41e-10;5!CL:0002570;3.43e-10;8!CL:0002580;5.79e-10;3!CL:0000197;3.01e-09;6!CL:0000098;3.01e-09;6!CL:0002167;3.01e-09;6!CL:0002583;1.67e-07;2!CL:0002617;6.17e-07;2!CL:0002320;7.11e-07;188 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.67e-40,76;CL:0002334,1.86e-25,12;CL:0002620,1.26e-23,23;CL:1000306,5.05e-14,4;CL:0002547,5.05e-14,4;CL:0000134,1.97e-11,354;CL:0002320,5.53e-11,361;CL:0002579,6.38e-11,3;CL:0000048,1.08e-10,427;CL:0000346,2.18e-10,3;CL:1000428,2.18e-10,3;CL:0000723,2.27e-10,433;CL:0002559,2.70e-10,5;CL:0002570,3.71e-10,8;CL:0000219,3.86e-10,386;CL:0002580,4.24e-10,3;CL:0000034,5.94e-10,441;CL:0000197,3.27e-09,6;CL:0000098,3.27e-09,6;CL:0002167,3.27e-09,6;CL:0002583,1.51e-07,2;CL:0002617,6.67e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!1.11e-09!5;DOID:450!1.11e-09!5;DOID:66!1.11e-09!5;DOID:423!1.11e-09!5;DOID:0080000!1.11e-09!5;DOID:11722!1.11e-09!5 | |||
|ontology_enrichment_disease_v019=DOID:17;4.57e-16;5!DOID:450;4.57e-16;5!DOID:66;4.57e-16;5!DOID:423;4.57e-16;5!DOID:0080000;4.57e-16;5!DOID:11722;4.57e-16;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,4.65e-16,5;DOID:450,4.65e-16,5;DOID:66,4.65e-16,5;DOID:423,4.65e-16,5;DOID:0080000,4.65e-16,5;DOID:11722,4.65e-16,5 | |||
|ontology_enrichment_uberon=UBERON:0002199!1.26e-19!45;UBERON:0002416!1.26e-19!45;UBERON:0002097!5.23e-19!40;UBERON:0003102!2.26e-16!95;UBERON:0000914!1.13e-12!83;UBERON:0002329!1.13e-12!83;UBERON:0003077!1.13e-12!83;UBERON:0003059!1.13e-12!83;UBERON:0007282!1.13e-12!83;UBERON:0009618!1.13e-12!83;UBERON:0007285!1.13e-12!83;UBERON:0004290!4.42e-10!70;UBERON:0001758!1.49e-09!6;UBERON:0003672!1.49e-09!6;UBERON:0000415!1.54e-08!4;UBERON:0007240!1.54e-08!4;UBERON:0005742!1.54e-08!4;UBERON:0005734!1.54e-08!4;UBERON:0004664!1.54e-08!4;UBERON:0004663!1.54e-08!4;UBERON:0000486!2.44e-08!82;UBERON:0002067!3.96e-08!9;UBERON:0004016!3.96e-08!9;UBERON:0010083!3.96e-08!9;UBERON:0002384!4.14e-08!375;UBERON:0000475!4.65e-08!365;UBERON:0002073!6.96e-08!4;UBERON:0005086!6.96e-08!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;2.46e-18;41!UBERON:0002199;3.44e-15;46!UBERON:0002416;3.44e-15;46!UBERON:0004797;5.20e-14;4!UBERON:0000415;5.20e-14;4!UBERON:0007240;5.20e-14;4!UBERON:0005742;5.20e-14;4!UBERON:0005734;5.20e-14;4!UBERON:0004664;5.20e-14;4!UBERON:0004663;5.20e-14;4!UBERON:0003102;5.61e-13;50!UBERON:0000412;2.08e-10;3!UBERON:0001992;2.08e-10;3!UBERON:0002073;2.41e-10;5!UBERON:0003688;5.81e-09;6!UBERON:0002358;5.81e-09;6!UBERON:0003684;5.81e-09;6!UBERON:0001178;5.81e-09;6!UBERON:0000310;1.88e-07;10!UBERON:0002384;3.91e-07;198!UBERON:0001443;9.58e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,7.90e-25,46;UBERON:0002416,7.90e-25,46;UBERON:0002097,7.40e-23,41;UBERON:0000415,5.05e-14,4;UBERON:0007240,5.05e-14,4;UBERON:0005742,5.05e-14,4;UBERON:0005734,5.05e-14,4;UBERON:0004664,5.05e-14,4;UBERON:0004663,5.05e-14,4;UBERON:0003102,2.65e-13,99;UBERON:0002384,4.36e-11,371;UBERON:0000412,2.18e-10,3;UBERON:0001992,2.18e-10,3;UBERON:0002073,2.70e-10,5;UBERON:0005086,2.70e-10,5;UBERON:0003688,6.80e-09,6;UBERON:0002358,6.80e-09,6;UBERON:0003684,6.80e-09,6;UBERON:0001178,6.80e-09,6;UBERON:0004797,5.36e-08,7;UBERON:0000310,1.69e-07,10;UBERON:0001443,8.69e-07,11 | |||
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|short_description=p5@KCNK2 | |||
}} |
Revision as of 03:35, 12 September 2013
Short description: | p5@KCNK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_KCNK2_5end |
Coexpression cluster: | C633_Olfactory_Fibroblast_Preadipocyte_Hair_tenocyte_mesenchymal_basal |
Association with transcript: | -222bp_to_NM_001017424, uc001hko.2, uc001hkp.2, uc009xdm.2_5end |
EntrezGene: | KCNK2 |
HGNC: | 6277 |
UniProt: | O95069Q6ZW95 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.67e-40 | 76 |
preadipocyte | 1.86e-25 | 12 |
skin fibroblast | 1.26e-23 | 23 |
fibroblast of tunica adventitia of artery | 5.05e-14 | 4 |
fibroblast of the aortic adventitia | 5.05e-14 | 4 |
mesenchymal cell | 1.97e-11 | 354 |
connective tissue cell | 5.53e-11 | 361 |
omentum preadipocyte | 6.38e-11 | 3 |
multi fate stem cell | 1.08e-10 | 427 |
hair follicle dermal papilla cell | 2.18e-10 | 3 |
stem cell of epidermis | 2.18e-10 | 3 |
somatic stem cell | 2.27e-10 | 433 |
hair follicle cell | 2.70e-10 | 5 |
mesenchymal stem cell of adipose | 3.71e-10 | 8 |
motile cell | 3.86e-10 | 386 |
preadipocyte of the breast | 4.24e-10 | 3 |
stem cell | 5.94e-10 | 441 |
receptor cell | 3.27e-09 | 6 |
sensory epithelial cell | 3.27e-09 | 6 |
olfactory epithelial cell | 3.27e-09 | 6 |
subcutaneous preadipocyte | 1.51e-07 | 2 |
adipocyte of breast | 6.67e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
integument | 7.90e-25 | 46 |
integumental system | 7.90e-25 | 46 |
skin of body | 7.40e-23 | 41 |
artery wall | 5.05e-14 | 4 |
tunica adventitia of artery | 5.05e-14 | 4 |
adventitia | 5.05e-14 | 4 |
tunica adventitia of blood vessel | 5.05e-14 | 4 |
aorta tunica adventitia | 5.05e-14 | 4 |
aorta wall | 5.05e-14 | 4 |
surface structure | 2.65e-13 | 99 |
connective tissue | 4.36e-11 | 371 |
dermal papilla | 2.18e-10 | 3 |
papillary layer of dermis | 2.18e-10 | 3 |
hair follicle | 2.70e-10 | 5 |
hair follicle placode | 2.70e-10 | 5 |
omentum | 6.80e-09 | 6 |
peritoneum | 6.80e-09 | 6 |
abdominal cavity | 6.80e-09 | 6 |
visceral peritoneum | 6.80e-09 | 6 |
blood vessel layer | 5.36e-08 | 7 |
breast | 1.69e-07 | 10 |
chest | 8.69e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 4.65e-16 | 5 |
myotonic disease | 4.65e-16 | 5 |
muscle tissue disease | 4.65e-16 | 5 |
myopathy | 4.65e-16 | 5 |
muscular disease | 4.65e-16 | 5 |
myotonic dystrophy | 4.65e-16 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.