FFCP PHASE1:Hg19::chr1:209941889..209941928,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=80342|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=30766|TSSclassifier=S|UniProt=|association_with_transcript=-11bp_to_ENST00000476050_5end|coexpression_cluster_id=C57|description=CAGE_peak_2_at_TRAF3IP3_5end|id=chr1:209941889..209941928,+|ontology_enrichment_celltype=CL:0000037!3.21e-75!172;CL:0000566!3.21e-75!172;CL:0000738!4.12e-73!140;CL:0000988!7.89e-72!182;CL:0002032!3.34e-70!165;CL:0000837!3.34e-70!165;CL:0002087!2.99e-63!119;CL:0002031!8.41e-63!124;CL:0000766!3.61e-37!76;CL:0000763!3.90e-37!112;CL:0000049!3.90e-37!112;CL:0000839!5.68e-33!70;CL:0000557!3.77e-31!71;CL:0002057!9.60e-31!42;CL:0000542!1.14e-29!53;CL:0000051!1.14e-29!53;CL:0000838!3.27e-29!52;CL:0002194!4.18e-29!63;CL:0000576!4.18e-29!63;CL:0000040!4.18e-29!63;CL:0000559!4.18e-29!63;CL:0002009!1.60e-27!65;CL:0000860!1.96e-27!45;CL:0000084!1.59e-19!25;CL:0000827!1.59e-19!25;CL:0000791!4.60e-16!18;CL:0000789!4.60e-16!18;CL:0002420!4.60e-16!18;CL:0002419!4.60e-16!18;CL:0000790!4.60e-16!18;CL:0000134!1.92e-13!358;CL:0002320!4.32e-13!365;CL:0000625!1.23e-10!11;CL:0000219!5.96e-10!390;CL:0000945!1.02e-09!24;CL:0000826!1.02e-09!24;CL:0000236!3.19e-08!14;CL:0002393!3.44e-08!9;CL:0002397!3.44e-08!9|ontology_enrichment_celltype_v019=CL:0000860;3.16e-28;33!CL:0002057;3.16e-28;33!CL:0000576;1.42e-27;48!CL:0000084;3.01e-25;25!CL:0000473;5.75e-25;39!CL:0000234;5.75e-25;39!CL:0002087;1.33e-24;104!CL:0000766;6.23e-24;69!CL:0000791;1.16e-20;18!CL:0000789;1.16e-20;18!CL:0002419;1.16e-20;18!CL:0000542;1.84e-20;53!CL:0000738;8.56e-19;136!CL:0000763;9.23e-15;100!CL:0000988;1.25e-14;177!CL:0000625;1.65e-13;11!CL:0000236;4.39e-10;13!CL:0000945;5.69e-10;24!CL:0000219;1.49e-08;193!CL:0000624;6.10e-08;6!CL:0000094;2.13e-07;8!CL:0002393;3.40e-07;6!CL:0002397;3.40e-07;6|ontology_enrichment_celltype_v019_2=CL:0000738,1.87e-92,136;CL:0000037,3.21e-88,168;CL:0000988,4.45e-86,177;CL:0002087,7.34e-83,115;CL:0002032,8.43e-82,161;CL:0000837,8.43e-82,161;CL:0002031,1.02e-79,120;CL:0000766,1.53e-51,72;CL:0000557,1.09e-43,67;CL:0000839,3.83e-43,66;CL:0000763,3.80e-42,108;CL:0000049,3.80e-42,108;CL:0000473,2.70e-41,48;CL:0000234,2.70e-41,48;CL:0002194,9.57e-41,59;CL:0000576,9.57e-41,59;CL:0000040,9.57e-41,59;CL:0000559,9.57e-41,59;CL:0000860,4.03e-40,42;CL:0002057,4.03e-40,42;CL:0002009,8.38e-39,61;CL:0000542,1.31e-35,53;CL:0000051,1.31e-35,53;CL:0000838,5.32e-35,52;CL:0000084,2.81e-25,25;CL:0000827,2.81e-25,25;CL:0000134,2.79e-21,354;CL:0000791,1.06e-20,18;CL:0000789,1.06e-20,18;CL:0002420,1.06e-20,18;CL:0002419,1.06e-20,18;CL:0000790,1.06e-20,18;CL:0002320,1.17e-20,361;CL:0000219,1.16e-16,386;CL:0000625,1.55e-13,11;CL:0000048,1.47e-11,427;CL:0000034,2.76e-11,441;CL:0000723,6.11e-11,433;CL:0000236,9.73e-11,14;CL:0002393,2.61e-10,9;CL:0002397,2.61e-10,9;CL:0000945,5.70e-10,24;CL:0000826,5.70e-10,24;CL:0000624,5.88e-08,6;CL:0000094,2.21e-07,8|ontology_enrichment_development_v019=CL:0002057;1.03e-28;42!CL:0000790;1.16e-20;18!CL:0000051;1.84e-20;53!CL:0000049;4.95e-12;108|ontology_enrichment_disease=DOID:2531!2.39e-07!51;DOID:0060083!2.39e-07!51;DOID:1240!7.21e-07!39|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!1.09e-41!102;UBERON:0003061!1.09e-41!102;UBERON:0002193!3.42e-37!112;UBERON:0002371!7.61e-27!80;UBERON:0001474!2.84e-23!86;UBERON:0002405!3.11e-19!115;UBERON:0004765!3.27e-18!101;UBERON:0001434!3.27e-18!101;UBERON:0002384!2.73e-12!375;UBERON:0000178!5.72e-12!15;UBERON:0000179!5.72e-12!15;UBERON:0000463!5.72e-12!15;UBERON:0003081!4.69e-08!216;UBERON:0007023!1.12e-07!115|ontology_enrichment_uberon_v019=UBERON:0000178;2.84e-15;15!UBERON:0000179;2.84e-15;15!UBERON:0000463;2.84e-15;15!UBERON:0002390;2.06e-10;32|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.78e-57,98;UBERON:0003061,1.78e-57,98;UBERON:0002193,2.05e-52,108;UBERON:0002405,1.56e-38,93;UBERON:0002371,2.08e-37,76;UBERON:0001474,3.54e-33,82;UBERON:0004765,1.87e-29,90;UBERON:0001434,1.61e-24,100;UBERON:0002384,4.25e-19,371;UBERON:0000178,2.72e-15,15;UBERON:0000179,2.72e-15,15;UBERON:0000463,2.72e-15,15;UBERON:0003081,5.65e-15,203;UBERON:0002204,8.50e-08,167;UBERON:0004177,6.99e-07,7;UBERON:0005057,6.99e-07,7|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,8.86395506676235,7.47115363994506,11.4130632904835,15.7345710739562,21.1106168953467,11.7660253720218,0,0,0,0,0,2.93600439334847,13.2958898047651,19.6533558520739,21.4840762008693,4.47830948479849,8.74512898251245,4.63636021741536,12.6496467738221,13.6035339727971,15.0402117936446,18.1294648786434,17.6802191849385,21.9891523335524,15.8230815777183,16.6504459243915,17.9726494715325,66.1911707014308,41.3110197493649,39.2736811123591,18.4477492751753,12.0078706025452,15.5059204267108,32.7509764836866,34.6603349242181,35.1635419189473,12.5343494070952,11.9678194572979,11.9342930149154,15.9615081245721,13.6172453925874,11.8336227309159,18.0899038984855,21.3807996552283,23.6735840728577,17.5565855763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3.99638905436179,7.49558669436967,0,0,0,2.19100916473955,1.83491713361816,0.716697915757256,0,0,0,3.7031878836078,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0.20686599172379,1.27940389140589,0.714193294391221,17.6327723852297,18.5603395744615,0,0.190941474834495,0.404234377916439,0.435433495793923,0,10.7089764293194,0.860666464712116,0.665320713092027,0,0,0,0,0,0.488965776731466,0,0,11.4726062346885,11.2198972306132|short_description=p2@TRAF3IP3}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=80342 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30766 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-11bp_to_ENST00000476050_5end | |||
|coexpression_cluster_id=C57 | |||
|description=CAGE_peak_2_at_TRAF3IP3_5end | |||
|id=chr1:209941889..209941928,+ | |||
|ontology_enrichment_celltype=CL:0000037!3.21e-75!172;CL:0000566!3.21e-75!172;CL:0000738!4.12e-73!140;CL:0000988!7.89e-72!182;CL:0002032!3.34e-70!165;CL:0000837!3.34e-70!165;CL:0002087!2.99e-63!119;CL:0002031!8.41e-63!124;CL:0000766!3.61e-37!76;CL:0000763!3.90e-37!112;CL:0000049!3.90e-37!112;CL:0000839!5.68e-33!70;CL:0000557!3.77e-31!71;CL:0002057!9.60e-31!42;CL:0000542!1.14e-29!53;CL:0000051!1.14e-29!53;CL:0000838!3.27e-29!52;CL:0002194!4.18e-29!63;CL:0000576!4.18e-29!63;CL:0000040!4.18e-29!63;CL:0000559!4.18e-29!63;CL:0002009!1.60e-27!65;CL:0000860!1.96e-27!45;CL:0000084!1.59e-19!25;CL:0000827!1.59e-19!25;CL:0000791!4.60e-16!18;CL:0000789!4.60e-16!18;CL:0002420!4.60e-16!18;CL:0002419!4.60e-16!18;CL:0000790!4.60e-16!18;CL:0000134!1.92e-13!358;CL:0002320!4.32e-13!365;CL:0000625!1.23e-10!11;CL:0000219!5.96e-10!390;CL:0000945!1.02e-09!24;CL:0000826!1.02e-09!24;CL:0000236!3.19e-08!14;CL:0002393!3.44e-08!9;CL:0002397!3.44e-08!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.16e-28;33!CL:0002057;3.16e-28;33!CL:0000576;1.42e-27;48!CL:0000084;3.01e-25;25!CL:0000473;5.75e-25;39!CL:0000234;5.75e-25;39!CL:0002087;1.33e-24;104!CL:0000766;6.23e-24;69!CL:0000791;1.16e-20;18!CL:0000789;1.16e-20;18!CL:0002419;1.16e-20;18!CL:0000542;1.84e-20;53!CL:0000738;8.56e-19;136!CL:0000763;9.23e-15;100!CL:0000988;1.25e-14;177!CL:0000625;1.65e-13;11!CL:0000236;4.39e-10;13!CL:0000945;5.69e-10;24!CL:0000219;1.49e-08;193!CL:0000624;6.10e-08;6!CL:0000094;2.13e-07;8!CL:0002393;3.40e-07;6!CL:0002397;3.40e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.87e-92,136;CL:0000037,3.21e-88,168;CL:0000988,4.45e-86,177;CL:0002087,7.34e-83,115;CL:0002032,8.43e-82,161;CL:0000837,8.43e-82,161;CL:0002031,1.02e-79,120;CL:0000766,1.53e-51,72;CL:0000557,1.09e-43,67;CL:0000839,3.83e-43,66;CL:0000763,3.80e-42,108;CL:0000049,3.80e-42,108;CL:0000473,2.70e-41,48;CL:0000234,2.70e-41,48;CL:0002194,9.57e-41,59;CL:0000576,9.57e-41,59;CL:0000040,9.57e-41,59;CL:0000559,9.57e-41,59;CL:0000860,4.03e-40,42;CL:0002057,4.03e-40,42;CL:0002009,8.38e-39,61;CL:0000542,1.31e-35,53;CL:0000051,1.31e-35,53;CL:0000838,5.32e-35,52;CL:0000084,2.81e-25,25;CL:0000827,2.81e-25,25;CL:0000134,2.79e-21,354;CL:0000791,1.06e-20,18;CL:0000789,1.06e-20,18;CL:0002420,1.06e-20,18;CL:0002419,1.06e-20,18;CL:0000790,1.06e-20,18;CL:0002320,1.17e-20,361;CL:0000219,1.16e-16,386;CL:0000625,1.55e-13,11;CL:0000048,1.47e-11,427;CL:0000034,2.76e-11,441;CL:0000723,6.11e-11,433;CL:0000236,9.73e-11,14;CL:0002393,2.61e-10,9;CL:0002397,2.61e-10,9;CL:0000945,5.70e-10,24;CL:0000826,5.70e-10,24;CL:0000624,5.88e-08,6;CL:0000094,2.21e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;1.03e-28;42!CL:0000790;1.16e-20;18!CL:0000051;1.84e-20;53!CL:0000049;4.95e-12;108 | |||
|ontology_enrichment_disease=DOID:2531!2.39e-07!51;DOID:0060083!2.39e-07!51;DOID:1240!7.21e-07!39 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.09e-41!102;UBERON:0003061!1.09e-41!102;UBERON:0002193!3.42e-37!112;UBERON:0002371!7.61e-27!80;UBERON:0001474!2.84e-23!86;UBERON:0002405!3.11e-19!115;UBERON:0004765!3.27e-18!101;UBERON:0001434!3.27e-18!101;UBERON:0002384!2.73e-12!375;UBERON:0000178!5.72e-12!15;UBERON:0000179!5.72e-12!15;UBERON:0000463!5.72e-12!15;UBERON:0003081!4.69e-08!216;UBERON:0007023!1.12e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.84e-15;15!UBERON:0000179;2.84e-15;15!UBERON:0000463;2.84e-15;15!UBERON:0002390;2.06e-10;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.78e-57,98;UBERON:0003061,1.78e-57,98;UBERON:0002193,2.05e-52,108;UBERON:0002405,1.56e-38,93;UBERON:0002371,2.08e-37,76;UBERON:0001474,3.54e-33,82;UBERON:0004765,1.87e-29,90;UBERON:0001434,1.61e-24,100;UBERON:0002384,4.25e-19,371;UBERON:0000178,2.72e-15,15;UBERON:0000179,2.72e-15,15;UBERON:0000463,2.72e-15,15;UBERON:0003081,5.65e-15,203;UBERON:0002204,8.50e-08,167;UBERON:0004177,6.99e-07,7;UBERON:0005057,6.99e-07,7 | |||
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| |||
|short_description=p2@TRAF3IP3 | |||
}} |
Revision as of 03:25, 12 September 2013
Short description: | p2@TRAF3IP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_TRAF3IP3_5end |
Coexpression cluster: | C57_Neutrophils_Eosinophils_Whole_CD4_CD8_CD19_Natural |
Association with transcript: | -11bp_to_ENST00000476050_5end |
EntrezGene: | TRAF3IP3 |
HGNC: | 30766 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.78e-57 | 98 |
blood island | 1.78e-57 | 98 |
hemolymphoid system | 2.05e-52 | 108 |
immune system | 1.56e-38 | 93 |
bone marrow | 2.08e-37 | 76 |
bone element | 3.54e-33 | 82 |
skeletal element | 1.87e-29 | 90 |
skeletal system | 1.61e-24 | 100 |
connective tissue | 4.25e-19 | 371 |
blood | 2.72e-15 | 15 |
haemolymphatic fluid | 2.72e-15 | 15 |
organism substance | 2.72e-15 | 15 |
lateral plate mesoderm | 5.65e-15 | 203 |
musculoskeletal system | 8.50e-08 | 167 |
hemopoietic organ | 6.99e-07 | 7 |
immune organ | 6.99e-07 | 7 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.