FFCP PHASE1:Hg19::chr1:208323145..208323153,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C1847|description=CAGE_peak_at_chr1:208323145..208323153,-|id=chr1:208323145..208323153,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002623;6.20e-25;3!CL:0000622;2.17e-15;5!CL:0000154;5.42e-13;6!CL:0000150;5.63e-09;9|ontology_enrichment_celltype_v019_2=CL:0002623,1.29e-24,3;CL:0000622,3.35e-15,5;CL:0000154,7.78e-13,6;CL:0000150,7.16e-09,9|ontology_enrichment_development_v019=UBERON:0006215;2.55e-07;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3151;2.47e-19;1!DOID:3149;2.47e-19;1!DOID:3451;2.37e-10;2!DOID:4159;2.37e-10;2!DOID:0060122;2.37e-10;2|ontology_enrichment_disease_v019_2=DOID:3151,5.62e-19,1;DOID:3149,5.62e-19,1;DOID:3451,3.58e-10,2;DOID:4159,3.58e-10,2;DOID:0060122,3.58e-10,2|ontology_enrichment_uberon=UBERON:0001049!1.68e-23!57;UBERON:0005068!1.68e-23!57;UBERON:0006241!1.68e-23!57;UBERON:0007135!1.68e-23!57;UBERON:0000955!7.46e-23!69;UBERON:0006238!7.46e-23!69;UBERON:0001017!3.96e-21!82;UBERON:0002616!7.78e-21!59;UBERON:0005743!9.85e-21!86;UBERON:0002780!1.20e-19!41;UBERON:0001890!1.20e-19!41;UBERON:0006240!1.20e-19!41;UBERON:0003080!5.41e-19!42;UBERON:0000073!1.32e-18!94;UBERON:0001016!1.32e-18!94;UBERON:0002020!1.02e-17!34;UBERON:0003528!1.02e-17!34;UBERON:0001893!4.33e-17!34;UBERON:0002791!3.45e-16!33;UBERON:0001869!2.25e-15!32;UBERON:0007023!3.37e-15!115;UBERON:0003075!4.07e-15!86;UBERON:0007284!4.07e-15!86;UBERON:0002346!5.72e-14!90;UBERON:0000956!2.33e-13!25;UBERON:0000203!2.33e-13!25;UBERON:0000033!1.16e-12!123;UBERON:0002619!2.89e-12!22;UBERON:0000153!3.20e-12!129;UBERON:0007811!3.20e-12!129;UBERON:0001950!4.37e-12!20;UBERON:0003056!1.01e-11!61;UBERON:0004111!5.42e-11!241;UBERON:0000025!5.13e-10!194;UBERON:0000477!5.32e-10!286;UBERON:0004121!2.75e-09!169;UBERON:0000924!8.65e-09!173;UBERON:0006601!8.65e-09!173;UBERON:0002021!4.53e-08!5|ontology_enrichment_uberon_v019=UBERON:0001044;5.42e-13;6!UBERON:0003293;5.42e-13;6!UBERON:0003294;5.42e-13;6!UBERON:0010047;5.42e-13;6!UBERON:0003408;5.42e-13;6!UBERON:0000167;5.42e-13;6|ontology_enrichment_uberon_v019_2=UBERON:0001044,7.78e-13,6;UBERON:0003293,7.78e-13,6;UBERON:0003294,7.78e-13,6;UBERON:0010047,7.78e-13,6;UBERON:0000167,7.78e-13,6;UBERON:0003408,4.50e-08,10|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35426486594342,0.188242339542605,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66944122552934,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0.573673241497627,0,0,0,0,0,0.269421344139376,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0.300091096084402,0,0,0,0.168776332241266,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18157981336281,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,0,0,0.179117045405697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510450849978337,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.281338832821026,0,0,0.422250816255987,0.19924798825107,0,0.503865495708552,0,0,0,0,0,0,0,0,0,0,0.185536196323703,1.99613798001194,0,0,0,0,0,0,0,0,0.347249989866585,0,0,0,1.43753037910592,0.886642856860642,0,0,0,0,0,0,0.269272933229316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22206028986725,0,0,0,0.067401132980677,0,0,0,0.391329237864179,0,0,0,0,0.252746318513952,0,0.103688191397247,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0.0730893170861856,0,0,0,0,0,0,0.443175571691151,0.195551382734803,0,0.426905989478705,0.19980960958213,0.144090417154106,0,5.49103993158287,0,0,0.235694034616795,0,0,0.203996435272644,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.425246896606173,1.0063040627978,0,0.0524545881349981,0,0.35857467866569,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0.258565912723101,0.39669780522807,0,0,0.106787412567695,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1847 | |||
|description=CAGE_peak_at_chr1:208323145..208323153,- | |||
|id=chr1:208323145..208323153,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002623;6.20e-25;3!CL:0000622;2.17e-15;5!CL:0000154;5.42e-13;6!CL:0000150;5.63e-09;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002623,1.29e-24,3;CL:0000622,3.35e-15,5;CL:0000154,7.78e-13,6;CL:0000150,7.16e-09,9 | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.55e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3151;2.47e-19;1!DOID:3149;2.47e-19;1!DOID:3451;2.37e-10;2!DOID:4159;2.37e-10;2!DOID:0060122;2.37e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,5.62e-19,1;DOID:3149,5.62e-19,1;DOID:3451,3.58e-10,2;DOID:4159,3.58e-10,2;DOID:0060122,3.58e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.68e-23!57;UBERON:0005068!1.68e-23!57;UBERON:0006241!1.68e-23!57;UBERON:0007135!1.68e-23!57;UBERON:0000955!7.46e-23!69;UBERON:0006238!7.46e-23!69;UBERON:0001017!3.96e-21!82;UBERON:0002616!7.78e-21!59;UBERON:0005743!9.85e-21!86;UBERON:0002780!1.20e-19!41;UBERON:0001890!1.20e-19!41;UBERON:0006240!1.20e-19!41;UBERON:0003080!5.41e-19!42;UBERON:0000073!1.32e-18!94;UBERON:0001016!1.32e-18!94;UBERON:0002020!1.02e-17!34;UBERON:0003528!1.02e-17!34;UBERON:0001893!4.33e-17!34;UBERON:0002791!3.45e-16!33;UBERON:0001869!2.25e-15!32;UBERON:0007023!3.37e-15!115;UBERON:0003075!4.07e-15!86;UBERON:0007284!4.07e-15!86;UBERON:0002346!5.72e-14!90;UBERON:0000956!2.33e-13!25;UBERON:0000203!2.33e-13!25;UBERON:0000033!1.16e-12!123;UBERON:0002619!2.89e-12!22;UBERON:0000153!3.20e-12!129;UBERON:0007811!3.20e-12!129;UBERON:0001950!4.37e-12!20;UBERON:0003056!1.01e-11!61;UBERON:0004111!5.42e-11!241;UBERON:0000025!5.13e-10!194;UBERON:0000477!5.32e-10!286;UBERON:0004121!2.75e-09!169;UBERON:0000924!8.65e-09!173;UBERON:0006601!8.65e-09!173;UBERON:0002021!4.53e-08!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001044;5.42e-13;6!UBERON:0003293;5.42e-13;6!UBERON:0003294;5.42e-13;6!UBERON:0010047;5.42e-13;6!UBERON:0003408;5.42e-13;6!UBERON:0000167;5.42e-13;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001044,7.78e-13,6;UBERON:0003293,7.78e-13,6;UBERON:0003294,7.78e-13,6;UBERON:0010047,7.78e-13,6;UBERON:0000167,7.78e-13,6;UBERON:0003408,4.50e-08,10 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35426486594342,0.188242339542605,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66944122552934,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0.573673241497627,0,0,0,0,0,0.269421344139376,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0.300091096084402,0,0,0,0.168776332241266,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18157981336281,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,0,0,0.179117045405697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510450849978337,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.281338832821026,0,0,0.422250816255987,0.19924798825107,0,0.503865495708552,0,0,0,0,0,0,0,0,0,0,0.185536196323703,1.99613798001194,0,0,0,0,0,0,0,0,0.347249989866585,0,0,0,1.43753037910592,0.886642856860642,0,0,0,0,0,0,0.269272933229316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22206028986725,0,0,0,0.067401132980677,0,0,0,0.391329237864179,0,0,0,0,0.252746318513952,0,0.103688191397247,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0.0730893170861856,0,0,0,0,0,0,0.443175571691151,0.195551382734803,0,0.426905989478705,0.19980960958213,0.144090417154106,0,5.49103993158287,0,0,0.235694034616795,0,0,0.203996435272644,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.425246896606173,1.0063040627978,0,0.0524545881349981,0,0.35857467866569,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0.258565912723101,0.39669780522807,0,0,0.106787412567695,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.221858103073705,0.124192805882767,0.138348634936231,0.499921631848426,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0.15543720058278,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0.219284049578707,0,0,0.168942440653073,0,0,0,0.829550616910385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0,0.256916900385838,1.41696576325585,0.319267718114302,0.205116364240755,0.252071696221718,0.0691572524642179,0,0,0.196295437002051,0,0,0.115525666150338,0,0,0,0,0,0,0.261906694481422,0.163771917510097,0,0.135075169236789,0,0,0.317079050969534,1.09394961803644,0,0,0,0,0,0.336283722218824,0,0.227662191351298,0.0887023701626388,0.115233987555779,0,0.271878931907327,0.197318320688547,0,0,0,0.314231179832004,0,0,0,0,0.142953088353313,0,0,0.347716544605159,0,1.03608082081518,1.0243108625637,0,0,0.118332000730565,0,0.846774100381858,0,0,0,0,0,0,0.647428837187895,0,0,0,0.233939463462106,0,0,0,0,0.150962843566674,0,0,0.470317296361523,0.245148321753905,0,0.196308467114945,0,0,0,0.0939839179798536,0,0,0.178553938605658,0,0,0,0,0.143339583151451,0.315543124386369,0.135982980381829,0,0.5290268405154,0,0,0,0,0,0.126698501011437,0,0,0.0918948995348449,0,0,0,0.829169439458779,0.20686599172379,0,0,0,0.124149428591716,0.224263725161227,0.0636471582781649,0.404234377916439,0,0,0,0,0,0.0814032686109745,0,0,0,0,0.122241444182866,0,0,0.201273793591026,0 | |||
|short_description=p@chr1:208323145..208323153,- | |||
}} |
Revision as of 03:19, 12 September 2013
Short description: | p@chr1:208323145..208323153, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:208323145..208323153, - |
Coexpression cluster: | C1847_gastrointestinal_cerebellum_parietal_middle_salivary_acute_Neurons |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell of salivary gland | 1.29e-24 | 3 |
acinar cell | 3.35e-15 | 5 |
protein secreting cell | 7.78e-13 | 6 |
glandular epithelial cell | 7.16e-09 | 9 |
Ontology term | p-value | n |
---|---|---|
saliva-secreting gland | 7.78e-13 | 6 |
gland of oral region | 7.78e-13 | 6 |
gland of foregut | 7.78e-13 | 6 |
oral gland | 7.78e-13 | 6 |
oral cavity | 7.78e-13 | 6 |
gland of gut | 4.50e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 5.62e-19 | 1 |
keratoacanthoma | 5.62e-19 | 1 |
skin carcinoma | 3.58e-10 | 2 |
skin cancer | 3.58e-10 | 2 |
integumentary system cancer | 3.58e-10 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.