FFCP PHASE1:Hg19::chr1:205225319..205225338,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9911|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=24239|TSSclassifier=S|UniProt=G5E963|association_with_transcript=0bp_to_ENST00000329800,ENST00000468846,uc001hcb.1_5end|coexpression_cluster_id=C33|description=CAGE_peak_2_at_TMCC2_5end|id=chr1:205225319..205225338,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000764;9.32e-10;2!CL:0000558;9.32e-10;2!CL:0000097;8.45e-08;5|ontology_enrichment_celltype_v019_2=CL:0000764,9.33e-10,2;CL:0000765,9.33e-10,2;CL:0000050,9.33e-10,2;CL:0000038,9.33e-10,2;CL:0000558,9.33e-10,2;CL:0000547,9.33e-10,2;CL:0000549,9.33e-10,2;CL:0000550,9.33e-10,2;CL:0000552,9.33e-10,2;CL:0000097,9.17e-08,5;CL:0002028,9.17e-08,5|ontology_enrichment_development_v019=UBERON:0004872;2.16e-09;7|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.41e-24!115;UBERON:0000178!1.29e-22!15;UBERON:0000179!1.29e-22!15;UBERON:0000463!1.29e-22!15;UBERON:0004151!7.89e-07!3|ontology_enrichment_uberon_v019=UBERON:0000178;4.56e-21;15!UBERON:0000179;4.56e-21;15!UBERON:0000463;4.56e-21;15!UBERON:0000922;1.64e-15;49!UBERON:0002390;1.02e-14;32!UBERON:0000341;4.60e-09;2!UBERON:0004177;1.09e-07;5!UBERON:0005057;1.09e-07;5!UBERON:0002193;2.79e-07;42|ontology_enrichment_uberon_v019_2=UBERON:0000178,4.62e-21,15;UBERON:0000179,4.62e-21,15;UBERON:0000463,4.62e-21,15;UBERON:0000341,4.60e-09,2;UBERON:0007023,3.53e-07,114|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0.918251677112708,0,0,0,0,0,0,0,0,0.75374599577023,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.96513985737078,2.24203425192614,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.4155617054249,2.01767934783746,22.4711531498956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2174.83871645102,1997.88971673229,0,0,0,1.44257416306811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03558180854457,0,0,0,0,71.0426652925037,64.9941626071019,45.0021277867588,10.7204298956005,11.5181436464134,47.9870250282611,63.7237095940975,70.5881406901901,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,3.2454681417118,0,2.81974010175699,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.3689855408164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.15802195610297,0,0,0,0,1.43042921082341,0,0,0,0,0,0.0884575645033392,3.05515072466813,0.593042257361244,0,0.104421949505455,0.202203398942031,4.81546588379273,0,0,0,0,0,0,4.28501866282686,2.59064976476801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.93774963014692,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0.717873024576814,0.399358000997982,0,1.56220020209311,21.2299773058055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,11.9596460947796,0,0,0,0.714695326373367,1.98627591109629,0,0,0,0,0,1.64185041498678,0,0,0.293104467356165,321.991740056698,0,0,0,0,3.09683496446315,65.396990921461,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443716206147409,0.434674820589684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0.206686796501184,0,0.546974809018219,0,0,0,0,0,0,0,0,7.62840383398694,0,0,0,0.0657727735628491,0,0,0.156986185701028,0,0,1.82631744101899,0,0,0.285906176706625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307988420568741,13.9177731760584,2.4285549652957,0,0,0,0,0,0,0,1.09279780251979,0,0.245148321753905,0,0,0,5.4945244585842,0,1.78569444161722,208.779099146416,0,0,0,0,0.730336388246517,0,0.143339583151451,0,0,5.23620828408453,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310298987585686,9.59552918554414,6.18967521805725,0.129177819672012,5.52464957233135,0,0.891060215894309,0.202117188958219,0,2.05339980651169,0,0.0717222053926763,3.99192427855216,0,0,0,0,2.34640942403454,0,3.66206560484165,0.665756774185513,0,0|short_description=p2@TMCC2}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=9911 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24239 | |||
|TSSclassifier=S | |||
|UniProt=G5E963 | |||
|association_with_transcript=0bp_to_ENST00000329800,ENST00000468846,uc001hcb.1_5end | |||
|coexpression_cluster_id=C33 | |||
|description=CAGE_peak_2_at_TMCC2_5end | |||
|id=chr1:205225319..205225338,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000764;9.32e-10;2!CL:0000558;9.32e-10;2!CL:0000097;8.45e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,9.33e-10,2;CL:0000765,9.33e-10,2;CL:0000050,9.33e-10,2;CL:0000038,9.33e-10,2;CL:0000558,9.33e-10,2;CL:0000547,9.33e-10,2;CL:0000549,9.33e-10,2;CL:0000550,9.33e-10,2;CL:0000552,9.33e-10,2;CL:0000097,9.17e-08,5;CL:0002028,9.17e-08,5 | |||
|ontology_enrichment_development_v019=UBERON:0004872;2.16e-09;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.41e-24!115;UBERON:0000178!1.29e-22!15;UBERON:0000179!1.29e-22!15;UBERON:0000463!1.29e-22!15;UBERON:0004151!7.89e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.56e-21;15!UBERON:0000179;4.56e-21;15!UBERON:0000463;4.56e-21;15!UBERON:0000922;1.64e-15;49!UBERON:0002390;1.02e-14;32!UBERON:0000341;4.60e-09;2!UBERON:0004177;1.09e-07;5!UBERON:0005057;1.09e-07;5!UBERON:0002193;2.79e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,4.62e-21,15;UBERON:0000179,4.62e-21,15;UBERON:0000463,4.62e-21,15;UBERON:0000341,4.60e-09,2;UBERON:0007023,3.53e-07,114 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0.918251677112708,0,0,0,0,0,0,0,0,0.75374599577023,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.96513985737078,2.24203425192614,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.4155617054249,2.01767934783746,22.4711531498956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2174.83871645102,1997.88971673229,0,0,0,1.44257416306811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03558180854457,0,0,0,0,71.0426652925037,64.9941626071019,45.0021277867588,10.7204298956005,11.5181436464134,47.9870250282611,63.7237095940975,70.5881406901901,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,3.2454681417118,0,2.81974010175699,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.3689855408164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.15802195610297,0,0,0,0,1.43042921082341,0,0,0,0,0,0.0884575645033392,3.05515072466813,0.593042257361244,0,0.104421949505455,0.202203398942031,4.81546588379273,0,0,0,0,0,0,4.28501866282686,2.59064976476801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.93774963014692,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0.717873024576814,0.399358000997982,0,1.56220020209311,21.2299773058055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,11.9596460947796,0,0,0,0.714695326373367,1.98627591109629,0,0,0,0,0,1.64185041498678,0,0,0.293104467356165,321.991740056698,0,0,0,0,3.09683496446315,65.396990921461,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443716206147409,0.434674820589684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0.206686796501184,0,0.546974809018219,0,0,0,0,0,0,0,0,7.62840383398694,0,0,0,0.0657727735628491,0,0,0.156986185701028,0,0,1.82631744101899,0,0,0.285906176706625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307988420568741,13.9177731760584,2.4285549652957,0,0,0,0,0,0,0,1.09279780251979,0,0.245148321753905,0,0,0,5.4945244585842,0,1.78569444161722,208.779099146416,0,0,0,0,0.730336388246517,0,0.143339583151451,0,0,5.23620828408453,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310298987585686,9.59552918554414,6.18967521805725,0.129177819672012,5.52464957233135,0,0.891060215894309,0.202117188958219,0,2.05339980651169,0,0.0717222053926763,3.99192427855216,0,0,0,0,2.34640942403454,0,3.66206560484165,0.665756774185513,0,0 | |||
|short_description=p2@TMCC2 | |||
}} |
Revision as of 03:03, 12 September 2013
Short description: | p2@TMCC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_TMCC2_5end |
Coexpression cluster: | C33_Reticulocytes_liver_Whole_blood_chronic_acute_spleen |
Association with transcript: | 0bp_to_ENST00000329800, ENST00000468846, uc001hcb.1_5end |
EntrezGene: | TMCC2 |
HGNC: | 24239 |
UniProt: | G5E963 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 9.33e-10 | 2 |
erythroblast | 9.33e-10 | 2 |
megakaryocyte-erythroid progenitor cell | 9.33e-10 | 2 |
erythroid progenitor cell | 9.33e-10 | 2 |
reticulocyte | 9.33e-10 | 2 |
proerythroblast | 9.33e-10 | 2 |
basophilic erythroblast | 9.33e-10 | 2 |
polychromatophilic erythroblast | 9.33e-10 | 2 |
orthochromatic erythroblast | 9.33e-10 | 2 |
mast cell | 9.17e-08 | 5 |
basophil mast progenitor cell | 9.17e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
blood | 4.62e-21 | 15 |
haemolymphatic fluid | 4.62e-21 | 15 |
organism substance | 4.62e-21 | 15 |
throat | 4.60e-09 | 2 |
adult organism | 3.53e-07 | 114 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.