FFCP PHASE1:Hg19::chr1:190446662..190446678,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=339479|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=22393|TSSclassifier=S|UniProt=Q76B58|association_with_transcript=80bp_to_ENST00000367462,NM_199051,uc001gse.1_5end|coexpression_cluster_id=C108|description=CAGE_peak_6_at_FAM5C_5end|id=chr1:190446662..190446678,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002327;7.35e-18;4|ontology_enrichment_celltype_v019_2=CL:0002327,7.35e-18,4|ontology_enrichment_development_v019=UBERON:0008425;1.23e-66;1!UBERON:0003918;6.56e-08;10!UBERON:0007687;6.56e-08;10|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:5093;7.35e-18;4!DOID:1612;7.35e-18;4|ontology_enrichment_disease_v019_2=DOID:5093,7.35e-18,4;DOID:1612,7.35e-18,4;DOID:7,6.83e-08,39|ontology_enrichment_uberon=UBERON:0001049!1.31e-59!57;UBERON:0005068!1.31e-59!57;UBERON:0006241!1.31e-59!57;UBERON:0007135!1.31e-59!57;UBERON:0001017!3.82e-50!82;UBERON:0002616!7.53e-50!59;UBERON:0002020!7.68e-48!34;UBERON:0003528!7.68e-48!34;UBERON:0005743!1.82e-47!86;UBERON:0000955!2.77e-47!69;UBERON:0006238!2.77e-47!69;UBERON:0003075!3.27e-45!86;UBERON:0007284!3.27e-45!86;UBERON:0001893!1.38e-43!34;UBERON:0002346!7.55e-43!90;UBERON:0002780!1.20e-42!41;UBERON:0001890!1.20e-42!41;UBERON:0006240!1.20e-42!41;UBERON:0000073!2.98e-42!94;UBERON:0001016!2.98e-42!94;UBERON:0001869!3.29e-42!32;UBERON:0003080!1.62e-41!42;UBERON:0002791!1.19e-40!33;UBERON:0002619!1.69e-39!22;UBERON:0001950!3.18e-38!20;UBERON:0007023!2.92e-36!115;UBERON:0000956!1.78e-34!25;UBERON:0000203!1.78e-34!25;UBERON:0003056!5.64e-27!61;UBERON:0000033!3.79e-25!123;UBERON:0000153!1.26e-23!129;UBERON:0007811!1.26e-23!129;UBERON:0004121!3.86e-23!169;UBERON:0000924!2.07e-22!173;UBERON:0006601!2.07e-22!173;UBERON:0003076!1.17e-18!15;UBERON:0003057!1.17e-18!15;UBERON:0002298!1.32e-15!8;UBERON:0000200!1.56e-15!6;UBERON:0002308!1.28e-14!9;UBERON:0000125!1.28e-14!9;UBERON:0004733!2.36e-14!12;UBERON:0002028!2.36e-14!12;UBERON:0007277!2.36e-14!12;UBERON:0000025!2.63e-14!194;UBERON:0000064!8.96e-14!219;UBERON:0004732!3.57e-13!13;UBERON:0001872!5.42e-13!5;UBERON:0002021!5.42e-13!5;UBERON:0000477!9.77e-13!286;UBERON:0002771!1.30e-11!3;UBERON:0001871!1.60e-11!7;UBERON:0006331!1.69e-11!3;UBERON:0000988!2.44e-11!3;UBERON:0004111!7.46e-11!241;UBERON:0000481!2.09e-10!347;UBERON:0002680!2.44e-10!9;UBERON:0001895!2.44e-10!9;UBERON:0010092!2.44e-10!9;UBERON:0001737!5.51e-10!9;UBERON:0000483!1.34e-09!309;UBERON:0000369!1.77e-09!4;UBERON:0002435!1.77e-09!4;UBERON:0000204!1.77e-09!4;UBERON:0010082!1.77e-09!4;UBERON:0000119!2.02e-09!312;UBERON:0000062!2.26e-09!511;UBERON:0009663!5.54e-09!7;UBERON:0000475!6.97e-09!365;UBERON:0002148!2.70e-08!2;UBERON:0009662!2.70e-08!2;UBERON:0002360!5.26e-08!2;UBERON:0000094!5.26e-08!2;UBERON:0007645!5.26e-08!2;UBERON:0002420!5.46e-07!9;UBERON:0007245!5.46e-07!9;UBERON:0010009!5.46e-07!9;UBERON:0010011!5.46e-07!9;UBERON:0000454!5.46e-07!9|ontology_enrichment_uberon_v019=UBERON:0001911;7.35e-18;4!UBERON:0000310;5.73e-08;10!UBERON:0001443;2.32e-07;11|ontology_enrichment_uberon_v019_2=UBERON:0001911,7.35e-18,4;UBERON:0005333,7.35e-18,4;UBERON:0008425,7.35e-18,4;UBERON:0005311,7.35e-18,4;UBERON:0000076,1.24e-09,8;UBERON:0000310,5.73e-08,10;UBERON:0001443,2.32e-07,11|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0.337169380156203,0.241011029883482,0.110293972732394,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485442086998054,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.185536196323703,0,0,20.4656399991098,0,0,0,0,0.344743373241465,0,0,0.885741385813839,0,0,0.663475559587348,0.591095237907095,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0.234264445725339,0,0,0.242780379534093,0,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569797163602908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201550417460179,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0.364497339948148,0,0.394028536495991,0,0,0,0,0,0,2.79695391420225,0,0,0,0,0,0,0,0,0,0.129282956361551,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366078794705889,0.1251909307065,0,0.110929051536852,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256916900385838,0,0.478901577171454,0.41023272848151,0.252071696221718,0.622415272177961,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270150338473579,0.781078098613847,0.413373593002368,0.253663240775627,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.394636641377094,0,0,0.235479278551542,0.314231179832004,0,0,0,0,0,0,4.88213986546126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0,0.218559560503957,0,0,0,0.196308467114945,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0.271965960763659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p6@FAM5C}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=339479 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=22393 | |||
|TSSclassifier=S | |||
|UniProt=Q76B58 | |||
|association_with_transcript=80bp_to_ENST00000367462,NM_199051,uc001gse.1_5end | |||
|coexpression_cluster_id=C108 | |||
|description=CAGE_peak_6_at_FAM5C_5end | |||
|id=chr1:190446662..190446678,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002327;7.35e-18;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002327,7.35e-18,4 | |||
|ontology_enrichment_development_v019=UBERON:0008425;1.23e-66;1!UBERON:0003918;6.56e-08;10!UBERON:0007687;6.56e-08;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5093;7.35e-18;4!DOID:1612;7.35e-18;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,7.35e-18,4;DOID:1612,7.35e-18,4;DOID:7,6.83e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.31e-59!57;UBERON:0005068!1.31e-59!57;UBERON:0006241!1.31e-59!57;UBERON:0007135!1.31e-59!57;UBERON:0001017!3.82e-50!82;UBERON:0002616!7.53e-50!59;UBERON:0002020!7.68e-48!34;UBERON:0003528!7.68e-48!34;UBERON:0005743!1.82e-47!86;UBERON:0000955!2.77e-47!69;UBERON:0006238!2.77e-47!69;UBERON:0003075!3.27e-45!86;UBERON:0007284!3.27e-45!86;UBERON:0001893!1.38e-43!34;UBERON:0002346!7.55e-43!90;UBERON:0002780!1.20e-42!41;UBERON:0001890!1.20e-42!41;UBERON:0006240!1.20e-42!41;UBERON:0000073!2.98e-42!94;UBERON:0001016!2.98e-42!94;UBERON:0001869!3.29e-42!32;UBERON:0003080!1.62e-41!42;UBERON:0002791!1.19e-40!33;UBERON:0002619!1.69e-39!22;UBERON:0001950!3.18e-38!20;UBERON:0007023!2.92e-36!115;UBERON:0000956!1.78e-34!25;UBERON:0000203!1.78e-34!25;UBERON:0003056!5.64e-27!61;UBERON:0000033!3.79e-25!123;UBERON:0000153!1.26e-23!129;UBERON:0007811!1.26e-23!129;UBERON:0004121!3.86e-23!169;UBERON:0000924!2.07e-22!173;UBERON:0006601!2.07e-22!173;UBERON:0003076!1.17e-18!15;UBERON:0003057!1.17e-18!15;UBERON:0002298!1.32e-15!8;UBERON:0000200!1.56e-15!6;UBERON:0002308!1.28e-14!9;UBERON:0000125!1.28e-14!9;UBERON:0004733!2.36e-14!12;UBERON:0002028!2.36e-14!12;UBERON:0007277!2.36e-14!12;UBERON:0000025!2.63e-14!194;UBERON:0000064!8.96e-14!219;UBERON:0004732!3.57e-13!13;UBERON:0001872!5.42e-13!5;UBERON:0002021!5.42e-13!5;UBERON:0000477!9.77e-13!286;UBERON:0002771!1.30e-11!3;UBERON:0001871!1.60e-11!7;UBERON:0006331!1.69e-11!3;UBERON:0000988!2.44e-11!3;UBERON:0004111!7.46e-11!241;UBERON:0000481!2.09e-10!347;UBERON:0002680!2.44e-10!9;UBERON:0001895!2.44e-10!9;UBERON:0010092!2.44e-10!9;UBERON:0001737!5.51e-10!9;UBERON:0000483!1.34e-09!309;UBERON:0000369!1.77e-09!4;UBERON:0002435!1.77e-09!4;UBERON:0000204!1.77e-09!4;UBERON:0010082!1.77e-09!4;UBERON:0000119!2.02e-09!312;UBERON:0000062!2.26e-09!511;UBERON:0009663!5.54e-09!7;UBERON:0000475!6.97e-09!365;UBERON:0002148!2.70e-08!2;UBERON:0009662!2.70e-08!2;UBERON:0002360!5.26e-08!2;UBERON:0000094!5.26e-08!2;UBERON:0007645!5.26e-08!2;UBERON:0002420!5.46e-07!9;UBERON:0007245!5.46e-07!9;UBERON:0010009!5.46e-07!9;UBERON:0010011!5.46e-07!9;UBERON:0000454!5.46e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001911;7.35e-18;4!UBERON:0000310;5.73e-08;10!UBERON:0001443;2.32e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001911,7.35e-18,4;UBERON:0005333,7.35e-18,4;UBERON:0008425,7.35e-18,4;UBERON:0005311,7.35e-18,4;UBERON:0000076,1.24e-09,8;UBERON:0000310,5.73e-08,10;UBERON:0001443,2.32e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0.337169380156203,0.241011029883482,0.110293972732394,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485442086998054,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.185536196323703,0,0,20.4656399991098,0,0,0,0,0.344743373241465,0,0,0.885741385813839,0,0,0.663475559587348,0.591095237907095,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0.234264445725339,0,0,0.242780379534093,0,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569797163602908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201550417460179,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0.364497339948148,0,0.394028536495991,0,0,0,0,0,0,2.79695391420225,0,0,0,0,0,0,0,0,0,0.129282956361551,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366078794705889,0.1251909307065,0,0.110929051536852,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256916900385838,0,0.478901577171454,0.41023272848151,0.252071696221718,0.622415272177961,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270150338473579,0.781078098613847,0.413373593002368,0.253663240775627,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.394636641377094,0,0,0.235479278551542,0.314231179832004,0,0,0,0,0,0,4.88213986546126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0,0.218559560503957,0,0,0,0.196308467114945,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0.271965960763659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p6@FAM5C | |||
}} |
Revision as of 02:26, 12 September 2013
Short description: | p6@FAM5C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_FAM5C_5end |
Coexpression cluster: | C108_breast_hepatoblastoma_MCF7_parotid_salivary_submaxillary_prostate |
Association with transcript: | 80bp_to_ENST00000367462, NM_199051, uc001gse.1_5end |
EntrezGene: | FAM5C |
HGNC: | 22393 |
UniProt: | Q76B58 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mammary gland epithelial cell | 7.35e-18 | 4 |
Ontology term | p-value | n |
---|---|---|
mammary gland | 7.35e-18 | 4 |
mammary bud | 7.35e-18 | 4 |
mammary ridge | 7.35e-18 | 4 |
mammary placode | 7.35e-18 | 4 |
external ectoderm | 1.24e-09 | 8 |
breast | 5.73e-08 | 10 |
chest | 2.32e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 7.35e-18 | 4 |
breast cancer | 7.35e-18 | 4 |
disease of anatomical entity | 6.83e-08 | 39 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.