FFCP PHASE1:Hg19::chr1:169555779..169555790,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2153|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=3542|TSSclassifier=S|UniProt=P12259|association_with_transcript=-10bp_to_NM_000130,uc001ggg.1,uc010plr.1_5end|coexpression_cluster_id=C5|description=CAGE_peak_3_at_F5_5end|id=chr1:169555779..169555790,-|ontology_enrichment_celltype=CL:0002057!6.34e-14!42;CL:0000860!1.26e-12!45;CL:0000181!1.06e-08!12;CL:0000417!1.06e-08!12;CL:0000668!1.06e-08!12;CL:0000414!1.06e-08!12;CL:0000412!1.06e-08!12;CL:0000182!1.06e-08!12;CL:0000766!1.40e-07!76;CL:0002194!2.39e-07!63;CL:0000576!2.39e-07!63;CL:0000040!2.39e-07!63;CL:0000559!2.39e-07!63;CL:0002009!5.57e-07!65;CL:0000839!6.52e-07!70;CL:0000557!9.52e-07!71|ontology_enrichment_celltype_v019=CL:0000182;3.40e-28;12|ontology_enrichment_celltype_v019_2=CL:0000182,3.21e-28,12|ontology_enrichment_development_v019=UBERON:0004161;1.07e-22;11!UBERON:0009497;3.91e-19;13!UBERON:0003104;3.81e-13;31!UBERON:0003124;4.56e-08;1!UBERON:0001041;5.42e-08;30!UBERON:0005062;1.16e-07;4!UBERON:0007284;1.16e-07;4|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.05e-15!115;UBERON:0002405!2.84e-10!115;UBERON:0002107!3.39e-10!19;UBERON:0006925!3.39e-10!19;UBERON:0008836!3.39e-10!19;UBERON:0009856!1.23e-09!26;UBERON:0009854!1.42e-09!23;UBERON:0009497!1.09e-08!25;UBERON:0000015!1.09e-08!25;UBERON:0002423!1.09e-08!25;UBERON:0006235!1.09e-08!25;UBERON:0004161!1.09e-08!25;UBERON:0002298!1.17e-08!8;UBERON:0007499!1.43e-08!25;UBERON:0008835!1.82e-08!22;UBERON:0003894!1.82e-08!22;UBERON:0005057!2.69e-08!26;UBERON:0001896!1.43e-07!3;UBERON:0005290!1.43e-07!3;UBERON:0010096!1.43e-07!3|ontology_enrichment_uberon_v019=UBERON:0002107;6.10e-29;19!UBERON:0006925;6.10e-29;19!UBERON:0002423;1.17e-21;25!UBERON:0002368;3.05e-18;33!UBERON:0002365;1.06e-16;31!UBERON:0002330;1.06e-16;31!UBERON:0002133;1.93e-14;2!UBERON:0000949;8.74e-11;43!UBERON:0001896;1.31e-10;3!UBERON:0005290;1.31e-10;3!UBERON:0003978;6.21e-10;3!UBERON:0000946;6.21e-10;3!UBERON:0002336;2.42e-08;1!UBERON:0011215;2.42e-08;1!UBERON:0001018;2.42e-08;1!UBERON:0002473;2.42e-08;1!UBERON:0005340;2.42e-08;1!UBERON:0003544;2.42e-08;1!UBERON:0005970;2.42e-08;1!UBERON:0002316;2.42e-08;1!UBERON:0001020;2.42e-08;1!UBERON:0002437;2.42e-08;1!UBERON:0002135;4.56e-08;1!UBERON:0002134;4.56e-08;1!UBERON:0005208;4.56e-08;1!UBERON:0004145;4.56e-08;1!UBERON:0005946;4.56e-08;1!UBERON:0005965;4.56e-08;1!UBERON:0002078;4.56e-08;1!UBERON:0005172;9.46e-08;52!UBERON:0005173;9.46e-08;52|ontology_enrichment_uberon_v019_2=UBERON:0002107,5.83e-29,19;UBERON:0006925,5.83e-29,19;UBERON:0008836,5.83e-29,19;UBERON:0008835,8.02e-25,22;UBERON:0003894,8.02e-25,22;UBERON:0009854,1.11e-23,23;UBERON:0007499,1.13e-21,25;UBERON:0009497,1.13e-21,25;UBERON:0000015,1.13e-21,25;UBERON:0002423,1.13e-21,25;UBERON:0006235,1.13e-21,25;UBERON:0004161,1.13e-21,25;UBERON:0009856,8.70e-21,26;UBERON:0002368,1.64e-18,35;UBERON:0002365,3.32e-17,31;UBERON:0002330,3.32e-17,31;UBERON:0002133,1.28e-14,2;UBERON:0000949,5.09e-14,45;UBERON:0005172,2.10e-11,54;UBERON:0005173,2.10e-11,54;UBERON:0001896,1.34e-10,3;UBERON:0005290,1.34e-10,3;UBERON:0010096,1.34e-10,3;UBERON:0002530,2.74e-10,59;UBERON:0002417,4.29e-10,60;UBERON:0000916,4.29e-10,60;UBERON:0003978,4.73e-10,3;UBERON:0009751,4.73e-10,3;UBERON:0000946,4.73e-10,3;UBERON:0002523,4.73e-10,3;UBERON:0005983,4.73e-10,3;UBERON:0002165,4.73e-10,3;UBERON:0002062,4.73e-10,3;UBERON:0007280,4.73e-10,3;UBERON:0003929,2.89e-09,54;UBERON:0002336,2.69e-08,1;UBERON:0011215,2.69e-08,1;UBERON:0001018,2.69e-08,1;UBERON:0002473,2.69e-08,1;UBERON:0005340,2.69e-08,1;UBERON:0003544,2.69e-08,1;UBERON:0005970,2.69e-08,1;UBERON:0002316,2.69e-08,1;UBERON:0001020,2.69e-08,1;UBERON:0002437,2.69e-08,1;UBERON:0002135,2.89e-08,1;UBERON:0002134,4.72e-08,1;UBERON:0005208,4.72e-08,1;UBERON:0005946,4.72e-08,1;UBERON:0005965,4.72e-08,1;UBERON:0002078,4.72e-08,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.246301768349837,0.314843125254717,0.393364276848904,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0.411167888021826,0,0,1.0246428261164,1.89185783910868,0.689491361473237,0.645484683583826,0,0.188242339542605,0.272906150057846,0.224723484445085,0.612167784741805,0,0,0.659702600373432,0,0.426224750532694,0.290209238628584,0,0,1.50749199154046,1.0429658368404,1.08594422352558,1.81619850790011,0,0.632924774881769,0,0,0,0,0.150176892841506,0.32145117339416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.334231370655521,0.294605907474837,1.55073726208535,0.270803863765016,0.25618263945135,0.780356085359269,0,0,0,0,0,0,0,0,0.34362744548263,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=2153 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3542 | |||
|TSSclassifier=S | |||
|UniProt=P12259 | |||
|association_with_transcript=-10bp_to_NM_000130,uc001ggg.1,uc010plr.1_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_3_at_F5_5end | |||
|id=chr1:169555779..169555790,- | |||
|ontology_enrichment_celltype=CL:0002057!6.34e-14!42;CL:0000860!1.26e-12!45;CL:0000181!1.06e-08!12;CL:0000417!1.06e-08!12;CL:0000668!1.06e-08!12;CL:0000414!1.06e-08!12;CL:0000412!1.06e-08!12;CL:0000182!1.06e-08!12;CL:0000766!1.40e-07!76;CL:0002194!2.39e-07!63;CL:0000576!2.39e-07!63;CL:0000040!2.39e-07!63;CL:0000559!2.39e-07!63;CL:0002009!5.57e-07!65;CL:0000839!6.52e-07!70;CL:0000557!9.52e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0000182;3.40e-28;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.21e-28,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.07e-22;11!UBERON:0009497;3.91e-19;13!UBERON:0003104;3.81e-13;31!UBERON:0003124;4.56e-08;1!UBERON:0001041;5.42e-08;30!UBERON:0005062;1.16e-07;4!UBERON:0007284;1.16e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.05e-15!115;UBERON:0002405!2.84e-10!115;UBERON:0002107!3.39e-10!19;UBERON:0006925!3.39e-10!19;UBERON:0008836!3.39e-10!19;UBERON:0009856!1.23e-09!26;UBERON:0009854!1.42e-09!23;UBERON:0009497!1.09e-08!25;UBERON:0000015!1.09e-08!25;UBERON:0002423!1.09e-08!25;UBERON:0006235!1.09e-08!25;UBERON:0004161!1.09e-08!25;UBERON:0002298!1.17e-08!8;UBERON:0007499!1.43e-08!25;UBERON:0008835!1.82e-08!22;UBERON:0003894!1.82e-08!22;UBERON:0005057!2.69e-08!26;UBERON:0001896!1.43e-07!3;UBERON:0005290!1.43e-07!3;UBERON:0010096!1.43e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;6.10e-29;19!UBERON:0006925;6.10e-29;19!UBERON:0002423;1.17e-21;25!UBERON:0002368;3.05e-18;33!UBERON:0002365;1.06e-16;31!UBERON:0002330;1.06e-16;31!UBERON:0002133;1.93e-14;2!UBERON:0000949;8.74e-11;43!UBERON:0001896;1.31e-10;3!UBERON:0005290;1.31e-10;3!UBERON:0003978;6.21e-10;3!UBERON:0000946;6.21e-10;3!UBERON:0002336;2.42e-08;1!UBERON:0011215;2.42e-08;1!UBERON:0001018;2.42e-08;1!UBERON:0002473;2.42e-08;1!UBERON:0005340;2.42e-08;1!UBERON:0003544;2.42e-08;1!UBERON:0005970;2.42e-08;1!UBERON:0002316;2.42e-08;1!UBERON:0001020;2.42e-08;1!UBERON:0002437;2.42e-08;1!UBERON:0002135;4.56e-08;1!UBERON:0002134;4.56e-08;1!UBERON:0005208;4.56e-08;1!UBERON:0004145;4.56e-08;1!UBERON:0005946;4.56e-08;1!UBERON:0005965;4.56e-08;1!UBERON:0002078;4.56e-08;1!UBERON:0005172;9.46e-08;52!UBERON:0005173;9.46e-08;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,5.83e-29,19;UBERON:0006925,5.83e-29,19;UBERON:0008836,5.83e-29,19;UBERON:0008835,8.02e-25,22;UBERON:0003894,8.02e-25,22;UBERON:0009854,1.11e-23,23;UBERON:0007499,1.13e-21,25;UBERON:0009497,1.13e-21,25;UBERON:0000015,1.13e-21,25;UBERON:0002423,1.13e-21,25;UBERON:0006235,1.13e-21,25;UBERON:0004161,1.13e-21,25;UBERON:0009856,8.70e-21,26;UBERON:0002368,1.64e-18,35;UBERON:0002365,3.32e-17,31;UBERON:0002330,3.32e-17,31;UBERON:0002133,1.28e-14,2;UBERON:0000949,5.09e-14,45;UBERON:0005172,2.10e-11,54;UBERON:0005173,2.10e-11,54;UBERON:0001896,1.34e-10,3;UBERON:0005290,1.34e-10,3;UBERON:0010096,1.34e-10,3;UBERON:0002530,2.74e-10,59;UBERON:0002417,4.29e-10,60;UBERON:0000916,4.29e-10,60;UBERON:0003978,4.73e-10,3;UBERON:0009751,4.73e-10,3;UBERON:0000946,4.73e-10,3;UBERON:0002523,4.73e-10,3;UBERON:0005983,4.73e-10,3;UBERON:0002165,4.73e-10,3;UBERON:0002062,4.73e-10,3;UBERON:0007280,4.73e-10,3;UBERON:0003929,2.89e-09,54;UBERON:0002336,2.69e-08,1;UBERON:0011215,2.69e-08,1;UBERON:0001018,2.69e-08,1;UBERON:0002473,2.69e-08,1;UBERON:0005340,2.69e-08,1;UBERON:0003544,2.69e-08,1;UBERON:0005970,2.69e-08,1;UBERON:0002316,2.69e-08,1;UBERON:0001020,2.69e-08,1;UBERON:0002437,2.69e-08,1;UBERON:0002135,2.89e-08,1;UBERON:0002134,4.72e-08,1;UBERON:0005208,4.72e-08,1;UBERON:0005946,4.72e-08,1;UBERON:0005965,4.72e-08,1;UBERON:0002078,4.72e-08,1 | |||
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|short_description=p3@F5 | |||
}} |
Revision as of 01:40, 12 September 2013
Short description: | p3@F5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_F5_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -10bp_to_NM_000130, uc001ggg.1, uc010plr.1_5end |
EntrezGene: | F5 |
HGNC: | 3542 |
UniProt: | P12259 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.21e-28 | 12 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.