FFCP PHASE1:Hg19::chr1:155931747..155931808,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9181|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=682|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000470975_5end|description=CAGE_peak_12_at_ARHGEF2_5end|id=chr1:155931747..155931808,-|ontology_enrichment_celltype=CL:0000860!3.05e-19!45;CL:0002057!1.54e-18!42;CL:0002194!1.56e-11!63;CL:0000576!1.56e-11!63;CL:0000040!1.56e-11!63;CL:0000559!1.56e-11!63;CL:0000066!2.50e-11!254;CL:0002009!8.99e-11!65;CL:0000766!9.12e-10!76;CL:0000839!4.25e-09!70;CL:0000557!8.48e-09!71;CL:0000063!1.35e-08!578;CL:0000012!4.00e-08!682;CL:0000548!4.96e-08!679;CL:0000004!4.96e-08!679;CL:0000255!4.96e-08!679;CL:0000076!5.33e-07!62|ontology_enrichment_celltype_v019=CL:0000860;1.42e-43;33!CL:0002057;1.42e-43;33!CL:0000473;1.26e-28;39!CL:0000234;1.26e-28;39!CL:0000576;9.22e-24;48!CL:0000766;1.02e-14;69!CL:0002202;7.74e-11;9!CL:0002632;7.74e-11;9!CL:0002368;3.35e-09;13!CL:0000767;1.06e-07;3!CL:0000239;4.44e-07;3!CL:1000615;4.44e-07;3!CL:0002306;4.44e-07;3!CL:0002328;8.56e-07;3|ontology_enrichment_celltype_v019_2=CL:0000860,8.75e-45,42;CL:0002057,8.75e-45,42;CL:0000473,5.75e-38,48;CL:0000234,5.75e-38,48;CL:0002194,1.86e-28,59;CL:0000576,1.86e-28,59;CL:0000040,1.86e-28,59;CL:0000559,1.86e-28,59;CL:0002009,3.10e-27,61;CL:0000766,3.54e-27,72;CL:0000839,1.67e-24,66;CL:0000557,5.24e-24,67;CL:0000763,6.07e-15,108;CL:0000049,6.07e-15,108;CL:0002087,2.55e-11,115;CL:0000738,8.41e-11,136;CL:0002202,1.06e-10,9;CL:0002632,1.06e-10,9;CL:0002031,1.04e-09,120;CL:0002368,3.94e-09,13;CL:0000767,9.43e-08,3;CL:0002032,3.41e-07,161;CL:0000837,3.41e-07,161;CL:0000037,4.02e-07,168;CL:0000239,6.34e-07,3;CL:1000615,6.34e-07,3;CL:0002306,6.34e-07,3;CL:0002328,7.99e-07,3|ontology_enrichment_development_v019=CL:0002057;1.02e-33;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003081!8.43e-09!216;UBERON:0000467!8.84e-08!625;UBERON:0000480!1.11e-07!626;UBERON:0002371!4.42e-07!80|ontology_enrichment_uberon_v019=UBERON:0006853;4.44e-07;3!UBERON:0007685;4.44e-07;3!UBERON:0004134;4.44e-07;3!UBERON:0004815;8.56e-07;3!UBERON:0002031;8.56e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.96e-20,76;UBERON:0004765,1.97e-19,90;UBERON:0001474,5.06e-18,82;UBERON:0001434,1.49e-16,100;UBERON:0002405,6.96e-15,93;UBERON:0002390,9.45e-15,98;UBERON:0003061,9.45e-15,98;UBERON:0002193,1.36e-12,108;UBERON:0006853,6.34e-07,3;UBERON:0007685,6.34e-07,3;UBERON:0004134,6.34e-07,3;UBERON:0004815,7.99e-07,3;UBERON:0002031,7.99e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,2.09340350391728,0,0.527533956456907,0,0,0,0,0,0.487932798790507,0,0.204000691244253,0,0,0,0,0,0,0.0787107813136792,2.75354993794233,3.45446458287491,4.02521920621798,1.83884244895785,2.409647350226,1.10926203050036,0,0,0,6.64794490238253,8.82395568868623,8.46342395791822,0,0,0,2.18097358169347,1.51150377475524,1.69808842831471,5.34586784883075,4.52284676824008,6.19412741790207,2.01384674625505,2.56160706529101,1.18241114944293,8.61864201841546,10.3277549373412,8.12558919566051,2.82363509313907,1.63743690034707,2.02251136000576,3.67300670845083,4.8139354061414,5.75403413219137,0,1.39624560335142,0.852449501065388,2.61188314765726,6.80862269629368,1.86846674698672,7.03496262718881,5.21482918420201,4.12658804939722,1.21079900526674,5.89244217580104,2.53169909952708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.0945348171640679,0.221729397462564,0.087834785693126,0,0,0,0,0,0,0.238490624305342,0.571994910780128,0,1.39133685156694,0,0,0,0.419499436209906,1.10047216776027,1.46296476575767,0.516833518338658,0.35576626268671,0,0.402829317109147,0.760272105718513,0,1.10298924103761,1.62028389576352,0.17859945656816,0.22452937262617,0.112611480483322,0,1.89853131913626,0.916008719652036,0,0,0,0,0.12663051166458,0,0,0,0,0,0.24666754841716,0.311211035399766,0.404132016209064,0,0,0,0,0,0.570471821544449,0,0,0,0.140450806702248,0.204154171254893,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0.226864366320042,0.358779271377724,0,0,0.300091096084402,0,0,0,0.506328996723799,0.0974370051611986,0.757301322732344,0.0920498986422993,0,0,0.201504196455281,0.508681776931463,0.966304265816484,1.63647672354501,0.860413786167011,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0.217879444092406,0.237270619111097,0,0,0.38474715694639,0,0,0.4115740113314,0,0,0,0,0,0,0,0.658501712451753,1.1240175325762,2.01057944823262,0,0,0,0,0,0.117408694235822,0.288732895522148,0.462985512576611,0.190254152234598,0,0,0,0.234004265139238,0,1.87467667973554,1.51183915378974,1.13420077793909,0.895585227028483,0.581267877027924,2.68367875415648,0,0,0,0,0,0,0,0,0,0,0,0,0.672786506072164,0.43596006883328,0.2933531432838,0.387815147273333,0,0.845302752556,0,0,0,0,0.799266537048298,0,0,0,0,0,0.791951872933429,0,0,0.599837947092342,0,0,0,0.239624855491583,0,0,0.144781306667579,0.20547632255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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=9181 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=682 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000470975_5end | |||
|description=CAGE_peak_12_at_ARHGEF2_5end | |||
|id=chr1:155931747..155931808,- | |||
|ontology_enrichment_celltype=CL:0000860!3.05e-19!45;CL:0002057!1.54e-18!42;CL:0002194!1.56e-11!63;CL:0000576!1.56e-11!63;CL:0000040!1.56e-11!63;CL:0000559!1.56e-11!63;CL:0000066!2.50e-11!254;CL:0002009!8.99e-11!65;CL:0000766!9.12e-10!76;CL:0000839!4.25e-09!70;CL:0000557!8.48e-09!71;CL:0000063!1.35e-08!578;CL:0000012!4.00e-08!682;CL:0000548!4.96e-08!679;CL:0000004!4.96e-08!679;CL:0000255!4.96e-08!679;CL:0000076!5.33e-07!62 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.42e-43;33!CL:0002057;1.42e-43;33!CL:0000473;1.26e-28;39!CL:0000234;1.26e-28;39!CL:0000576;9.22e-24;48!CL:0000766;1.02e-14;69!CL:0002202;7.74e-11;9!CL:0002632;7.74e-11;9!CL:0002368;3.35e-09;13!CL:0000767;1.06e-07;3!CL:0000239;4.44e-07;3!CL:1000615;4.44e-07;3!CL:0002306;4.44e-07;3!CL:0002328;8.56e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,8.75e-45,42;CL:0002057,8.75e-45,42;CL:0000473,5.75e-38,48;CL:0000234,5.75e-38,48;CL:0002194,1.86e-28,59;CL:0000576,1.86e-28,59;CL:0000040,1.86e-28,59;CL:0000559,1.86e-28,59;CL:0002009,3.10e-27,61;CL:0000766,3.54e-27,72;CL:0000839,1.67e-24,66;CL:0000557,5.24e-24,67;CL:0000763,6.07e-15,108;CL:0000049,6.07e-15,108;CL:0002087,2.55e-11,115;CL:0000738,8.41e-11,136;CL:0002202,1.06e-10,9;CL:0002632,1.06e-10,9;CL:0002031,1.04e-09,120;CL:0002368,3.94e-09,13;CL:0000767,9.43e-08,3;CL:0002032,3.41e-07,161;CL:0000837,3.41e-07,161;CL:0000037,4.02e-07,168;CL:0000239,6.34e-07,3;CL:1000615,6.34e-07,3;CL:0002306,6.34e-07,3;CL:0002328,7.99e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.02e-33;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!8.43e-09!216;UBERON:0000467!8.84e-08!625;UBERON:0000480!1.11e-07!626;UBERON:0002371!4.42e-07!80 | |||
|ontology_enrichment_uberon_v019=UBERON:0006853;4.44e-07;3!UBERON:0007685;4.44e-07;3!UBERON:0004134;4.44e-07;3!UBERON:0004815;8.56e-07;3!UBERON:0002031;8.56e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.96e-20,76;UBERON:0004765,1.97e-19,90;UBERON:0001474,5.06e-18,82;UBERON:0001434,1.49e-16,100;UBERON:0002405,6.96e-15,93;UBERON:0002390,9.45e-15,98;UBERON:0003061,9.45e-15,98;UBERON:0002193,1.36e-12,108;UBERON:0006853,6.34e-07,3;UBERON:0007685,6.34e-07,3;UBERON:0004134,6.34e-07,3;UBERON:0004815,7.99e-07,3;UBERON:0002031,7.99e-07,3 | |||
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| |||
|short_description=p12@ARHGEF2 | |||
}} |
Revision as of 00:48, 12 September 2013
Short description: | p12@ARHGEF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_ARHGEF2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000470975_5end |
EntrezGene: | ARHGEF2 |
HGNC: | 682 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.96e-20 | 76 |
skeletal element | 1.97e-19 | 90 |
bone element | 5.06e-18 | 82 |
skeletal system | 1.49e-16 | 100 |
immune system | 6.96e-15 | 93 |
hematopoietic system | 9.45e-15 | 98 |
blood island | 9.45e-15 | 98 |
hemolymphoid system | 1.36e-12 | 108 |
renal cortex tubule | 6.34e-07 | 3 |
region of nephron tubule | 6.34e-07 | 3 |
proximal tubule | 6.34e-07 | 3 |
lower respiratory tract epithelium | 7.99e-07 | 3 |
epithelium of bronchus | 7.99e-07 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.