FFCP PHASE1:Hg19::chr1:146696912..146696974,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2330|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=3773|TSSclassifier=S|UniProt=C9JJD1|association_with_transcript=0bp_to_ENST00000441068,ENST00000478432_5end|coexpression_cluster_id=C5|description=CAGE_peak_1_at_FMO5_5end|id=chr1:146696912..146696974,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0004161;7.65e-07;11|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!4.32e-36!115;UBERON:0001049!7.27e-11!57;UBERON:0005068!7.27e-11!57;UBERON:0006241!7.27e-11!57;UBERON:0007135!7.27e-11!57;UBERON:0002616!4.89e-09!59;UBERON:0003080!1.32e-08!42;UBERON:0002780!3.74e-08!41;UBERON:0001890!3.74e-08!41;UBERON:0006240!3.74e-08!41;UBERON:0000955!1.64e-07!69;UBERON:0006238!1.64e-07!69;UBERON:0001017!3.59e-07!82;UBERON:0005743!6.86e-07!86|ontology_enrichment_uberon_v019=UBERON:0007023;3.81e-10;114!UBERON:0000073;1.61e-08;53!UBERON:0002616;1.61e-08;53!UBERON:0002780;1.76e-07;41!UBERON:0001890;1.76e-07;41!UBERON:0000125;2.05e-07;9!UBERON:0002308;2.05e-07;9!UBERON:0003135;2.34e-07;11!UBERON:0002298;2.95e-07;6|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.43e-43,114;UBERON:0001049,4.00e-14,56;UBERON:0005068,4.00e-14,56;UBERON:0006241,4.00e-14,56;UBERON:0007135,4.00e-14,56;UBERON:0000073,5.34e-13,53;UBERON:0002616,5.34e-13,53;UBERON:0011216,3.22e-12,223;UBERON:0002780,1.87e-10,41;UBERON:0001890,1.87e-10,41;UBERON:0003080,1.87e-10,41;UBERON:0006240,1.87e-10,41;UBERON:0000955,3.91e-10,68;UBERON:0006238,3.91e-10,68;UBERON:0001017,1.65e-08,81;UBERON:0003075,1.91e-08,82;UBERON:0007284,1.91e-08,82;UBERON:0002346,2.28e-08,86;UBERON:0003135,1.92e-07,11;UBERON:0001016,2.22e-07,89;UBERON:0003528,2.33e-07,34;UBERON:0002020,2.33e-07,34;UBERON:0000125,2.52e-07,9;UBERON:0002308,2.52e-07,9;UBERON:0002298,2.59e-07,6;UBERON:0001893,4.34e-07,34|phase1_expression=3.08853244759946,1.71280419112787,1.12763523276777,1.0007329835313,2.23480547213644,0.872338524100369,0,0,0,0.245733936501509,0,0,0,0.247532705920093,0.331397375727916,0,0,0,0,0.123121058076788,0,0,0.286235987131057,0,0.251085279189606,0,0,0,1.18009283054671,0.767658796194425,0.464448369948228,0,0,0,0,0,0.587200878669695,0.553995408531877,0.601633342410425,0.434021741431704,3.80656306207871,1.94336199611388,4.89393578504954,0.436194716338694,0.377875943688809,0.242584061187816,0.697287110717054,0.411167888021826,0.619412741790207,0.28769239232215,0.256160706529101,0.47296445977717,0.689491361473237,0,0,0.564727018627814,0.272906150057846,0.224723484445085,0,0.320929027076094,0.639337125799041,0.329851300186716,0.598390972864896,0,2.61188314765726,1.70215567407342,3.73693349397345,0.75374599577023,0.521482918420201,0.65156653411535,1.81619850790011,0.368277635987565,3.16462387440884,1.26753171787165,1.27562579979026,1.04829322754188,3.81917345898083,2.55300717830561,2.73233497385036,1.42506371870624,0.79566670879636,0.547992461293902,1.75996244461323,4.36910889009705,1.77901850772711,1.70692089026603,2.00197993518006,5.74752439954483,2.64417949113945,0.954053754535364,1.70763890732835,0.587237189370939,1.14681968437569,1.32171328579026,1.12101712596307,0.790152254325231,0,0.393010762749165,0.616804496998528,0.167186495390678,0,0,0,0.445641827540694,1.17842362989935,0.443067789167242,0.812411591295047,0.25618263945135,0.520237390239513,0,0.276350017785848,0.579606171470105,0,0,0,0.226618685395132,0,0,0,0,0,0,0.301150238155546,0.255973222308837,0,0.473554504088034,0,0.201606743224732,0.534880391567015,0.289648807765598,4.87613732627923,0,0,0.722878304769133,0,0.724232594804119,0,0,0.283604451492204,0,0.175669571386252,27.8330535432639,0,0,0,0,0.132957960518865,0.476981248610684,0,0.371457501329565,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.446498641420399,0.44905874525234,0,0,0,0.183201743930407,2.63560834872127,0,0,0,0.12663051166458,0.264818361626438,0,0,0,0,0,0.622422070799533,0,0,0.151357427644931,1.15235184896,0,0,0,0,0,0.161872944368132,0.140450806702248,0.408308342509787,0,0.309977343527296,1.18800285728205,0,0,0,0,0.250237039743928,0,0,0.30648779579902,0,0.113432183160021,0.179389635688862,0,0,0.300091096084402,0.412210116953756,0,0,0,0.194874010322397,0.504867548488229,0.644349290496095,0.323292113637624,0.355009592516614,0.201504196455281,0.169560592310488,0,0,0.286804595389004,1.09776335516636,0.132529768321485,2.67246068599892,1.86589899027667,3.28017106138317,0,1.56449532329816,1.28648187638577,0,0.464367928031979,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0.4115740113314,0,368.857151331528,109.093821051216,353.29236419548,0,14.2666588710012,0,0,0,0,0.185176890317059,0,0,0,0.115930404975077,0,0,0,0.190254152234598,1.58040879591855,1.71697232418975,1.72351904261178,0.468008530278475,0.594524649154913,0,0.335964256397719,0.141775097242386,0,0,0,12.8092441852945,0.616339038092582,0.621984346622316,1.72943944100354,1.6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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=2330 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3773 | |||
|TSSclassifier=S | |||
|UniProt=C9JJD1 | |||
|association_with_transcript=0bp_to_ENST00000441068,ENST00000478432_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_1_at_FMO5_5end | |||
|id=chr1:146696912..146696974,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004161;7.65e-07;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.32e-36!115;UBERON:0001049!7.27e-11!57;UBERON:0005068!7.27e-11!57;UBERON:0006241!7.27e-11!57;UBERON:0007135!7.27e-11!57;UBERON:0002616!4.89e-09!59;UBERON:0003080!1.32e-08!42;UBERON:0002780!3.74e-08!41;UBERON:0001890!3.74e-08!41;UBERON:0006240!3.74e-08!41;UBERON:0000955!1.64e-07!69;UBERON:0006238!1.64e-07!69;UBERON:0001017!3.59e-07!82;UBERON:0005743!6.86e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;3.81e-10;114!UBERON:0000073;1.61e-08;53!UBERON:0002616;1.61e-08;53!UBERON:0002780;1.76e-07;41!UBERON:0001890;1.76e-07;41!UBERON:0000125;2.05e-07;9!UBERON:0002308;2.05e-07;9!UBERON:0003135;2.34e-07;11!UBERON:0002298;2.95e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.43e-43,114;UBERON:0001049,4.00e-14,56;UBERON:0005068,4.00e-14,56;UBERON:0006241,4.00e-14,56;UBERON:0007135,4.00e-14,56;UBERON:0000073,5.34e-13,53;UBERON:0002616,5.34e-13,53;UBERON:0011216,3.22e-12,223;UBERON:0002780,1.87e-10,41;UBERON:0001890,1.87e-10,41;UBERON:0003080,1.87e-10,41;UBERON:0006240,1.87e-10,41;UBERON:0000955,3.91e-10,68;UBERON:0006238,3.91e-10,68;UBERON:0001017,1.65e-08,81;UBERON:0003075,1.91e-08,82;UBERON:0007284,1.91e-08,82;UBERON:0002346,2.28e-08,86;UBERON:0003135,1.92e-07,11;UBERON:0001016,2.22e-07,89;UBERON:0003528,2.33e-07,34;UBERON:0002020,2.33e-07,34;UBERON:0000125,2.52e-07,9;UBERON:0002308,2.52e-07,9;UBERON:0002298,2.59e-07,6;UBERON:0001893,4.34e-07,34 | |||
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| |||
|short_description=p1@FMO5 | |||
}} |
Revision as of 00:07, 12 September 2013
Short description: | p1@FMO5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_FMO5_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000441068, ENST00000478432_5end |
EntrezGene: | FMO5 |
HGNC: | 3773 |
UniProt: | C9JJD1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 5.43e-43 | 114 |
neural tube | 4.00e-14 | 56 |
neural rod | 4.00e-14 | 56 |
future spinal cord | 4.00e-14 | 56 |
neural keel | 4.00e-14 | 56 |
regional part of nervous system | 5.34e-13 | 53 |
regional part of brain | 5.34e-13 | 53 |
organ system subdivision | 3.22e-12 | 223 |
regional part of forebrain | 1.87e-10 | 41 |
forebrain | 1.87e-10 | 41 |
anterior neural tube | 1.87e-10 | 41 |
future forebrain | 1.87e-10 | 41 |
brain | 3.91e-10 | 68 |
future brain | 3.91e-10 | 68 |
central nervous system | 1.65e-08 | 81 |
neural plate | 1.91e-08 | 82 |
presumptive neural plate | 1.91e-08 | 82 |
neurectoderm | 2.28e-08 | 86 |
male reproductive organ | 1.92e-07 | 11 |
nervous system | 2.22e-07 | 89 |
brain grey matter | 2.33e-07 | 34 |
gray matter | 2.33e-07 | 34 |
neural nucleus | 2.52e-07 | 9 |
nucleus of brain | 2.52e-07 | 9 |
brainstem | 2.59e-07 | 6 |
telencephalon | 4.34e-07 | 34 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.