FFCP PHASE1:Hg19::chr1:114696441..114696455,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=148281|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=18638|TSSclassifier=S|UniProt=Q5T7P8|association_with_transcript=16bp_to_ENST00000369547,ENST00000393296,NM_001253772,NR_045589,uc001eev.2_5end|description=CAGE_peak_3_at_SYT6_5end|id=chr1:114696441..114696455,-|ontology_enrichment_celltype=CL:0002322!1.20e-17!5;CL:0000540!2.28e-09!6;CL:0000031!2.28e-09!6;CL:0000404!2.28e-09!6;CL:0000047!5.21e-07!8|ontology_enrichment_celltype_v019=CL:0002322;1.04e-58;5!CL:0002321;7.73e-28;15!CL:0000540;4.85e-18;6!CL:0000404;4.85e-18;6!CL:0000148;3.56e-11;10!CL:0000147;3.91e-08;14|ontology_enrichment_celltype_v019_2=CL:0002322,9.25e-59,5;CL:0000540,5.00e-18,6;CL:0000031,5.00e-18,6;CL:0000404,5.00e-18,6;CL:0000047,1.11e-13,8;CL:0000148,3.26e-11,10;CL:0000541,3.26e-11,10;CL:0000133,8.95e-09,59;CL:0000147,3.68e-08,14;CL:0000221,4.05e-07,72|ontology_enrichment_development_v019=CL:0000031;4.85e-18;6|ontology_enrichment_disease=DOID:3095!3.12e-13!22;DOID:2994!3.12e-13!22;DOID:171!4.24e-08!10|ontology_enrichment_disease_v019=DOID:3095;7.65e-09;22!DOID:2994;7.65e-09;22!DOID:3193;4.55e-07;2!DOID:962;4.55e-07;2|ontology_enrichment_disease_v019_2=DOID:3095,7.04e-09,22;DOID:2994,7.04e-09,22;DOID:3193,4.17e-07,2;DOID:962,4.17e-07,2|ontology_enrichment_uberon=UBERON:0000073!6.62e-37!94;UBERON:0001016!6.62e-37!94;UBERON:0005743!3.20e-34!86;UBERON:0001017!4.54e-34!82;UBERON:0001049!8.87e-29!57;UBERON:0005068!8.87e-29!57;UBERON:0006241!8.87e-29!57;UBERON:0007135!8.87e-29!57;UBERON:0000955!1.41e-26!69;UBERON:0006238!1.41e-26!69;UBERON:0002780!3.69e-24!41;UBERON:0001890!3.69e-24!41;UBERON:0006240!3.69e-24!41;UBERON:0002346!4.13e-24!90;UBERON:0001893!5.89e-24!34;UBERON:0002020!5.98e-24!34;UBERON:0003528!5.98e-24!34;UBERON:0003080!1.78e-23!42;UBERON:0002616!5.13e-23!59;UBERON:0001869!8.41e-23!32;UBERON:0002791!5.05e-22!33;UBERON:0003075!9.23e-22!86;UBERON:0007284!9.23e-22!86;UBERON:0000924!6.54e-21!173;UBERON:0006601!6.54e-21!173;UBERON:0003056!5.08e-20!61;UBERON:0004121!5.49e-19!169;UBERON:0002420!6.19e-16!9;UBERON:0007245!6.19e-16!9;UBERON:0010009!6.19e-16!9;UBERON:0010011!6.19e-16!9;UBERON:0000454!6.19e-16!9;UBERON:0002308!6.64e-16!9;UBERON:0000125!6.64e-16!9;UBERON:0009663!1.62e-15!7;UBERON:0001950!1.68e-15!20;UBERON:0000033!3.05e-14!123;UBERON:0002619!6.00e-14!22;UBERON:0000153!2.97e-13!129;UBERON:0007811!2.97e-13!129;UBERON:0000369!4.34e-13!4;UBERON:0002435!4.34e-13!4;UBERON:0000204!4.34e-13!4;UBERON:0010082!4.34e-13!4;UBERON:0000956!4.54e-12!25;UBERON:0000203!4.54e-12!25;UBERON:0007023!5.27e-11!115;UBERON:0002021!2.11e-10!5;UBERON:0005383!2.56e-10!3;UBERON:0005382!2.56e-10!3;UBERON:0002298!4.91e-09!8;UBERON:0001873!2.09e-07!2;UBERON:0010122!2.09e-07!2|ontology_enrichment_uberon_v019=UBERON:0000922;1.17e-15;49!UBERON:0003714;4.55e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0003714,4.17e-07,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.436882744260345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.19552671033272,3.04818467139416,2.90484857173796,1.55491582523056,2.52320850875628,1.09493207722749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837581326671744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278304294485554,1.99613798001194,0,0,0,0,0,0,0,0,0.347249989866585,0.885741385813839,0.241192877250816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.57205037544031,1.10031549277787,1.24632101408756,0,0,0.121499113316049,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.434674820589684,0.830091809617385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76736622782191,0,0.943595651135378,0,1.86705782949428,0.212574920101683,0,1.67593475391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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=148281 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18638 | |||
|TSSclassifier=S | |||
|UniProt=Q5T7P8 | |||
|association_with_transcript=16bp_to_ENST00000369547,ENST00000393296,NM_001253772,NR_045589,uc001eev.2_5end | |||
|description=CAGE_peak_3_at_SYT6_5end | |||
|id=chr1:114696441..114696455,- | |||
|ontology_enrichment_celltype=CL:0002322!1.20e-17!5;CL:0000540!2.28e-09!6;CL:0000031!2.28e-09!6;CL:0000404!2.28e-09!6;CL:0000047!5.21e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0002322;1.04e-58;5!CL:0002321;7.73e-28;15!CL:0000540;4.85e-18;6!CL:0000404;4.85e-18;6!CL:0000148;3.56e-11;10!CL:0000147;3.91e-08;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,9.25e-59,5;CL:0000540,5.00e-18,6;CL:0000031,5.00e-18,6;CL:0000404,5.00e-18,6;CL:0000047,1.11e-13,8;CL:0000148,3.26e-11,10;CL:0000541,3.26e-11,10;CL:0000133,8.95e-09,59;CL:0000147,3.68e-08,14;CL:0000221,4.05e-07,72 | |||
|ontology_enrichment_development_v019=CL:0000031;4.85e-18;6 | |||
|ontology_enrichment_disease=DOID:3095!3.12e-13!22;DOID:2994!3.12e-13!22;DOID:171!4.24e-08!10 | |||
|ontology_enrichment_disease_v019=DOID:3095;7.65e-09;22!DOID:2994;7.65e-09;22!DOID:3193;4.55e-07;2!DOID:962;4.55e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,7.04e-09,22;DOID:2994,7.04e-09,22;DOID:3193,4.17e-07,2;DOID:962,4.17e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0000073!6.62e-37!94;UBERON:0001016!6.62e-37!94;UBERON:0005743!3.20e-34!86;UBERON:0001017!4.54e-34!82;UBERON:0001049!8.87e-29!57;UBERON:0005068!8.87e-29!57;UBERON:0006241!8.87e-29!57;UBERON:0007135!8.87e-29!57;UBERON:0000955!1.41e-26!69;UBERON:0006238!1.41e-26!69;UBERON:0002780!3.69e-24!41;UBERON:0001890!3.69e-24!41;UBERON:0006240!3.69e-24!41;UBERON:0002346!4.13e-24!90;UBERON:0001893!5.89e-24!34;UBERON:0002020!5.98e-24!34;UBERON:0003528!5.98e-24!34;UBERON:0003080!1.78e-23!42;UBERON:0002616!5.13e-23!59;UBERON:0001869!8.41e-23!32;UBERON:0002791!5.05e-22!33;UBERON:0003075!9.23e-22!86;UBERON:0007284!9.23e-22!86;UBERON:0000924!6.54e-21!173;UBERON:0006601!6.54e-21!173;UBERON:0003056!5.08e-20!61;UBERON:0004121!5.49e-19!169;UBERON:0002420!6.19e-16!9;UBERON:0007245!6.19e-16!9;UBERON:0010009!6.19e-16!9;UBERON:0010011!6.19e-16!9;UBERON:0000454!6.19e-16!9;UBERON:0002308!6.64e-16!9;UBERON:0000125!6.64e-16!9;UBERON:0009663!1.62e-15!7;UBERON:0001950!1.68e-15!20;UBERON:0000033!3.05e-14!123;UBERON:0002619!6.00e-14!22;UBERON:0000153!2.97e-13!129;UBERON:0007811!2.97e-13!129;UBERON:0000369!4.34e-13!4;UBERON:0002435!4.34e-13!4;UBERON:0000204!4.34e-13!4;UBERON:0010082!4.34e-13!4;UBERON:0000956!4.54e-12!25;UBERON:0000203!4.54e-12!25;UBERON:0007023!5.27e-11!115;UBERON:0002021!2.11e-10!5;UBERON:0005383!2.56e-10!3;UBERON:0005382!2.56e-10!3;UBERON:0002298!4.91e-09!8;UBERON:0001873!2.09e-07!2;UBERON:0010122!2.09e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;1.17e-15;49!UBERON:0003714;4.55e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003714,4.17e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.436882744260345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.19552671033272,3.04818467139416,2.90484857173796,1.55491582523056,2.52320850875628,1.09493207722749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837581326671744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278304294485554,1.99613798001194,0,0,0,0,0,0,0,0,0.347249989866585,0.885741385813839,0.241192877250816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.57205037544031,1.10031549277787,1.24632101408756,0,0,0.121499113316049,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.434674820589684,0.830091809617385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76736622782191,0,0.943595651135378,0,1.86705782949428,0.212574920101683,0,1.67593475391973,0,0,0,0,0,0.321146125482298,0,0.159633859057151,0.41023272848151,1.00828678488687,0.345786262321089,0,0,0,0,0,0,0,0,0.198916222116275,0,0,0,0,0,0,0.135075169236789,0,0,0.253663240775627,2.18789923607288,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0.0679697329768317,0.328863867814245,0,0,0,0.471346769748006,0,0,0,0,0.0714765441766563,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.52863188514487,0,0,0,0,0,0,0.196308467114945,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0.203974470572744,0.872701380680755,0,0,0,0,0.883164973845552,5.13548188229369,0,0.815910637935854,0.26721740526556,5.60558887162554,0,0,0,0,0.310298987585686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@SYT6 | |||
}} |
Revision as of 23:39, 11 September 2013
Short description: | p3@SYT6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_SYT6_5end |
Coexpression cluster: | NA |
Association with transcript: | 16bp_to_ENST00000369547, ENST00000393296, NM_001253772, NR_045589, uc001eev.2_5end |
EntrezGene: | SYT6 |
HGNC: | 18638 |
UniProt: | Q5T7P8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 9.25e-59 | 5 |
neuron | 5.00e-18 | 6 |
neuroblast | 5.00e-18 | 6 |
electrically signaling cell | 5.00e-18 | 6 |
neuronal stem cell | 1.11e-13 | 8 |
melanocyte | 3.26e-11 | 10 |
melanoblast | 3.26e-11 | 10 |
neurectodermal cell | 8.95e-09 | 59 |
pigment cell | 3.68e-08 | 14 |
ectodermal cell | 4.05e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
neural tissue | 4.17e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 7.04e-09 | 22 |
germ cell cancer | 7.04e-09 | 22 |
peripheral nerve sheath neoplasm | 4.17e-07 | 2 |
neurofibroma | 4.17e-07 | 2 |
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