FFCP PHASE1:Hg19::chr19:49545674..49545685,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C367|description=CAGE_peak_at_chr19:49545674..49545685,+|id=chr19:49545674..49545685,+|ontology_enrichment_celltype=CL:1000507!6.71e-10!12;CL:1000494!6.71e-10!12;CL:0000066!1.24e-09!254;CL:1001319!1.18e-08!1;CL:1000600!1.18e-08!1;CL:1000449!1.88e-07!16|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:3111!2.13e-08!1;DOID:3603!2.13e-08!1;DOID:305!1.36e-07!106;DOID:0050687!3.15e-07!143|ontology_enrichment_disease_v019=DOID:4929;3.61e-34;2!DOID:7;2.59e-07;39|ontology_enrichment_disease_v019_2=DOID:4929,3.61e-34,2;DOID:7,7.07e-08,39|ontology_enrichment_uberon=UBERON:0000058!5.15e-13!26;UBERON:0002294!5.71e-10!7;UBERON:0001173!5.71e-10!7;UBERON:0004912!5.71e-10!7;UBERON:0009773!6.71e-10!12;UBERON:0001231!6.71e-10!12;UBERON:0004810!6.71e-10!12;UBERON:0004913!5.59e-09!1;UBERON:0003703!5.59e-09!1;UBERON:0001174!5.59e-09!1;UBERON:0004914!5.59e-09!1;UBERON:0004645!1.18e-08!1;UBERON:0001256!1.18e-08!1;UBERON:0001259!1.18e-08!1;UBERON:0002394!1.59e-08!4;UBERON:0003928!1.59e-08!4;UBERON:0004211!1.88e-07!16;UBERON:0001285!1.88e-07!16;UBERON:0007684!1.88e-07!16;UBERON:0003220!1.88e-07!16;UBERON:0004208!1.88e-07!16;UBERON:0006555!5.11e-07!17;UBERON:0005103!5.11e-07!17;UBERON:0000083!5.11e-07!17;UBERON:0009201!5.11e-07!17;UBERON:0004819!5.11e-07!17;UBERON:0006553!5.11e-07!17;UBERON:0003074!5.11e-07!17;UBERON:0003060!5.11e-07!17|ontology_enrichment_uberon_v019=UBERON:0004913;1.23e-66;1!UBERON:0003703;1.23e-66;1!UBERON:0001174;1.23e-66;1!UBERON:0004914;1.23e-66;1!UBERON:0002394;2.83e-66;4!UBERON:0003928;2.83e-66;4!UBERON:0002294;1.64e-38;7!UBERON:0001173;1.64e-38;7!UBERON:0000058;2.22e-27;10!UBERON:0002114;2.62e-23;2!UBERON:0003343;9.45e-18;4!UBERON:0004785;9.45e-18;4!UBERON:0002108;1.40e-14;4!UBERON:0000974;2.59e-12;6!UBERON:0002423;1.06e-11;25|ontology_enrichment_uberon_v019_2=UBERON:0004913,1.23e-66,1;UBERON:0003703,1.23e-66,1;UBERON:0001174,1.23e-66,1;UBERON:0004914,1.23e-66,1;UBERON:0002394,1.22e-44,6;UBERON:0003928,1.22e-44,6;UBERON:0002294,3.09e-30,9;UBERON:0001173,3.09e-30,9;UBERON:0004912,3.09e-30,9;UBERON:0002114,2.62e-23,2;UBERON:0003343,8.69e-18,4;UBERON:0004785,8.69e-18,4;UBERON:0000058,5.27e-15,19;UBERON:0002108,1.40e-14,4;UBERON:0008835,4.01e-13,22;UBERON:0003894,4.01e-13,22;UBERON:0009854,1.33e-12,23;UBERON:0007499,1.09e-11,25;UBERON:0009497,1.09e-11,25;UBERON:0000015,1.09e-11,25;UBERON:0002423,1.09e-11,25;UBERON:0006235,1.09e-11,25;UBERON:0004161,1.09e-11,25;UBERON:0009856,2.77e-11,26;UBERON:0000974,6.13e-08,10|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503946384596579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.902399225814824,0,0.784349769176855,0,0.105551628892876,0,0,0,0,0,0,0,0,0.447749509444357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16828856491525,0,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0.340776043570843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0.463044948647668,0,0.358177682162975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17777262201231,0,0,0,0,0,0,0,0.60511520611056,0,0,0,9.61064560410794,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.955538938977433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320965466756673,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.407016343054873,0,0,0,0,0,0,0,0,0|short_description=p@chr19:49545674..49545685,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C367 | |||
|description=CAGE_peak_at_chr19:49545674..49545685,+ | |||
|id=chr19:49545674..49545685,+ | |||
|ontology_enrichment_celltype=CL:1000507!6.71e-10!12;CL:1000494!6.71e-10!12;CL:0000066!1.24e-09!254;CL:1001319!1.18e-08!1;CL:1000600!1.18e-08!1;CL:1000449!1.88e-07!16 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3111!2.13e-08!1;DOID:3603!2.13e-08!1;DOID:305!1.36e-07!106;DOID:0050687!3.15e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:4929;3.61e-34;2!DOID:7;2.59e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:4929,3.61e-34,2;DOID:7,7.07e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0000058!5.15e-13!26;UBERON:0002294!5.71e-10!7;UBERON:0001173!5.71e-10!7;UBERON:0004912!5.71e-10!7;UBERON:0009773!6.71e-10!12;UBERON:0001231!6.71e-10!12;UBERON:0004810!6.71e-10!12;UBERON:0004913!5.59e-09!1;UBERON:0003703!5.59e-09!1;UBERON:0001174!5.59e-09!1;UBERON:0004914!5.59e-09!1;UBERON:0004645!1.18e-08!1;UBERON:0001256!1.18e-08!1;UBERON:0001259!1.18e-08!1;UBERON:0002394!1.59e-08!4;UBERON:0003928!1.59e-08!4;UBERON:0004211!1.88e-07!16;UBERON:0001285!1.88e-07!16;UBERON:0007684!1.88e-07!16;UBERON:0003220!1.88e-07!16;UBERON:0004208!1.88e-07!16;UBERON:0006555!5.11e-07!17;UBERON:0005103!5.11e-07!17;UBERON:0000083!5.11e-07!17;UBERON:0009201!5.11e-07!17;UBERON:0004819!5.11e-07!17;UBERON:0006553!5.11e-07!17;UBERON:0003074!5.11e-07!17;UBERON:0003060!5.11e-07!17 | |||
|ontology_enrichment_uberon_v019=UBERON:0004913;1.23e-66;1!UBERON:0003703;1.23e-66;1!UBERON:0001174;1.23e-66;1!UBERON:0004914;1.23e-66;1!UBERON:0002394;2.83e-66;4!UBERON:0003928;2.83e-66;4!UBERON:0002294;1.64e-38;7!UBERON:0001173;1.64e-38;7!UBERON:0000058;2.22e-27;10!UBERON:0002114;2.62e-23;2!UBERON:0003343;9.45e-18;4!UBERON:0004785;9.45e-18;4!UBERON:0002108;1.40e-14;4!UBERON:0000974;2.59e-12;6!UBERON:0002423;1.06e-11;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004913,1.23e-66,1;UBERON:0003703,1.23e-66,1;UBERON:0001174,1.23e-66,1;UBERON:0004914,1.23e-66,1;UBERON:0002394,1.22e-44,6;UBERON:0003928,1.22e-44,6;UBERON:0002294,3.09e-30,9;UBERON:0001173,3.09e-30,9;UBERON:0004912,3.09e-30,9;UBERON:0002114,2.62e-23,2;UBERON:0003343,8.69e-18,4;UBERON:0004785,8.69e-18,4;UBERON:0000058,5.27e-15,19;UBERON:0002108,1.40e-14,4;UBERON:0008835,4.01e-13,22;UBERON:0003894,4.01e-13,22;UBERON:0009854,1.33e-12,23;UBERON:0007499,1.09e-11,25;UBERON:0009497,1.09e-11,25;UBERON:0000015,1.09e-11,25;UBERON:0002423,1.09e-11,25;UBERON:0006235,1.09e-11,25;UBERON:0004161,1.09e-11,25;UBERON:0009856,2.77e-11,26;UBERON:0000974,6.13e-08,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503946384596579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.902399225814824,0,0.784349769176855,0,0.105551628892876,0,0,0,0,0,0,0,0,0.447749509444357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16828856491525,0,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0.340776043570843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0.463044948647668,0,0.358177682162975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17777262201231,0,0,0,0,0,0,0,0.60511520611056,0,0,0,9.61064560410794,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.955538938977433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320965466756673,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.407016343054873,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr19:49545674..49545685,+ | |||
}} |
Revision as of 21:44, 11 September 2013
Short description: | p@chr19:49545674..49545685, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:49545674..49545685, + |
Coexpression cluster: | C367_papillotubular_Macrophage_clear_pharyngeal_Renal_endometrial_tubular |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatopancreatic ampulla | 1.23e-66 | 1 |
extrahepatic bile duct | 1.23e-66 | 1 |
common bile duct | 1.23e-66 | 1 |
duodenal papilla | 1.23e-66 | 1 |
bile duct | 1.22e-44 | 6 |
digestive system duct | 1.22e-44 | 6 |
biliary system | 3.09e-30 | 9 |
biliary tree | 3.09e-30 | 9 |
biliary bud | 3.09e-30 | 9 |
duodenum | 2.62e-23 | 2 |
mucosa of oral region | 8.69e-18 | 4 |
respiratory system mucosa | 8.69e-18 | 4 |
duct | 5.27e-15 | 19 |
small intestine | 1.40e-14 | 4 |
hepatic diverticulum | 4.01e-13 | 22 |
liver primordium | 4.01e-13 | 22 |
digestive tract diverticulum | 1.33e-12 | 23 |
epithelial sac | 1.09e-11 | 25 |
epithelium of foregut-midgut junction | 1.09e-11 | 25 |
anatomical boundary | 1.09e-11 | 25 |
hepatobiliary system | 1.09e-11 | 25 |
foregut-midgut junction | 1.09e-11 | 25 |
septum transversum | 1.09e-11 | 25 |
sac | 2.77e-11 | 26 |
neck | 6.13e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
tubular adenocarcinoma | 3.61e-34 | 2 |
disease of anatomical entity | 7.07e-08 | 39 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.