FFCP PHASE1:Hg19::chr19:45909594..45909625,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10848|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=18838|TSSclassifier=S|UniProt=Q8WUF5|association_with_transcript=0bp_to_ENST00000418234,NM_001142502,uc002pbo.2,uc002pbp.2_5end|description=CAGE_peak_2_at_PPP1R13L_5end|id=chr19:45909594..45909625,-|ontology_enrichment_celltype=CL:0000066!1.07e-12!254|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=CL:0000066,4.94e-13,253|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:162!5.67e-12!235;DOID:0050687!6.77e-12!143;DOID:305!1.40e-11!106;DOID:14566!1.75e-10!239|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=DOID:162,5.99e-12,235;DOID:0050687,7.10e-12,143;DOID:305,1.42e-11,106;DOID:14566,1.77e-10,239|ontology_enrichment_uberon=UBERON:0000077!2.77e-08!130;UBERON:0004119!4.59e-08!169;UBERON:0000925!4.59e-08!169;UBERON:0006595!4.59e-08!169;UBERON:0000466!1.02e-07!126;UBERON:0001007!4.85e-07!155;UBERON:0001555!4.85e-07!155;UBERON:0007026!4.85e-07!155;UBERON:0005177!6.90e-07!107;UBERON:0001048!7.24e-07!168|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0005177,5.04e-08,101;UBERON:0004119,5.65e-07,160;UBERON:0000925,5.65e-07,160;UBERON:0006595,5.65e-07,160|phase1_expression=2.72517568905835,1.49870366723688,2.25527046553554,4.00293193412522,2.23480547213644,1.74467704820074,0,0,2.35067065379855,6.38908234903923,9.76921635161399,10.0483031179879,6.85794143393979,1.23766352960047,0.994192127183747,2.01697543935533,3.61616716814386,2.92124036154949,1.46379839637152,5.78668972960903,4.08001382488506,8.14982275843028,3.14859585844162,3.96935832711364,6.15158934014534,3.51501666440576,2.62721886239826,3.06972047123349,1.18009283054671,1.15148819429164,2.01260960310899,0,3.31326510656075,2.9580320813343,8.52139206383318,4.12290774213522,1.17440175733939,2.76997704265939,3.20871115952227,1.51907609501096,1.34349284543955,1.29557466407592,1.54545340580512,3.78035420826868,3.77875943688809,3.39617685662943,2.09186133215116,3.28934310417461,1.54853185447552,1.43846196161075,1.5369642391746,1.18241114944293,0.344745680736619,2.5819387343353,1.35426486594342,3.01187743268168,1.36453075028923,1.57306439111559,3.67300670845083,0.962787081228281,1.27867425159808,1.9791078011203,1.99463657621632,3.40979800426155,1.16083695451434,0.56738522469114,1.24564449799115,1.50749199154046,1.0429658368404,1.73751075764093,0,0.736555271975129,0.949387162322653,1.26753171787165,2.33864729961548,0.838634582033504,1.90958672949042,2.10247649978109,3.53596290733576,2.56511469367124,2.38700012638908,2.00930569141097,3.51992488922645,1.09227722252426,1.77901850772711,3.84057200309856,0.800791974072025,2.29900975981793,0.661044872784862,1.90810750907073,6.83055562931338,2.93618594685469,7.26319133437935,2.64342657158052,0.560508562981536,1.05353633910031,2.9506465517075,3.14408610199332,1.23360899399706,1.83905144929746,4.23698946623668,2.36723902867367,1.94826728407911,1.6711568532776,2.65145316727353,2.21533894583621,3.79125409271022,2.81800903396485,2.21100890851793,2.46656856905514,2.48715016007264,2.89803085735052,2.66915813691709,3.74557159325598,1.04535523804977,2.37949619664889,1.14966148080576,1.37450978193052,3.79529538029254,2.22995790026868,1.30216690771284,1.90090408889675,2.10805166708882,2.04778577847069,2.49861453104692,2.8413270245282,0,3.42731463482045,1.87208137048455,1.59306844271079,14.6284119788377,2.68280343881454,1.66221330396589,2.89151321907653,5.0133791063589,2.60723734129483,7.95285947051099,9.24606253575008,5.38848457835187,5.09977614163897,4.47957407034943,5.23916301990851,9.4716774956061,6.3033355273353,0.649094787309367,0.870648686496336,0.797747763113191,4.05434061319081,0.571994910780128,1.48583000531826,5.16782259153433,4.30117297553062,10.0670745466202,5.6530794192401,2.93649605346934,4.12677062910101,3.34391946458897,3.87625138753993,3.20189636418039,5.69025041699939,2.81980521976403,1.52054421143703,7.32186172644509,2.20597848207521,5.67099363517232,3.21479021822687,1.57170560838319,3.82879033643296,6.13266549863533,5.69559395740877,2.38162267109529,0,0,3.92484646928281,3.47880366186723,3.92554586160197,1.45650098894541,4.01571269048339,2.4826786753885,3.92474320099615,5.33744978648525,4.44001587150888,3.11211035399766,1.48181739276657,0.653847612453835,3.48122083583342,5.18558332031999,1.87457145467037,0.936480230490962,2.85235910772225,0.448346041655403,1.05691048779388,1.61872944368132,2.10676210053373,2.04154171254893,2.08818339430006,1.54988671763648,1.18800285728205,3.70900393917835,6.37112953356618,3.59309070908119,2.02003336744879,2.75260743718321,3.87889761677856,4.38977620880838,3.37136575378922,3.90618953157152,1.92834711372036,7.71375433462106,3.41691822109708,1.48352330811693,8.10245959427886,1.95799805553034,4.3798891807757,2.04728541964749,5.06328996723799,3.11798416515836,7.06814567883521,2.85354685791128,1.61646056818812,7.4552014428489,2.61955455391865,3.39121184620975,1.93260853163297,1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255677747,1.07028081699812,3.9531128713636,6.92625255496204,2.56636834063345,3.39566295674957,3.0598338470554,4.70317296361523,7.10930133086326,2.82811856521951,2.94462700672418,7.12911360785006,1.6906229103336,3.0586880643807,5.35708332485165,8.44398332453861,3.0981758336728,6.07083391259236,1.76447435857846,4.8144820013501,2.92134555298607,9.17458566809082,6.73696040811821,3.94428905482962,1.35982980381829,3.05445483238264,6.87734892670021,2.97596014533401,3.69740502905135,4.32626562123789,7.82231833977489,9.39683918887781,8.86889507080059,4.79347499787314,14.9641746948714,6.52453786697399,7.0198111001865,3.56159881625725,2.41167717140561,1.65833887891756,9.30896962757057,9.38229520364316,5.95161078659351,5.81300188524055,9.62158071585798,5.60659312903067,11.583782806626,3.84022659020617,4.78976845373315,3.76456631193809,8.82311894491097,7.38738715544566,4.65724499164419,9.27997262165109,3.09509303045375,3.8614456457388,1.88632924423832,14.0784565442073,12.4686273066524,7.73102738799903,11.3178651611537,6.44076139491284,3.8468219076388|short_description=p2@PPP1R13L}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=10848 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18838 | |||
|TSSclassifier=S | |||
|UniProt=Q8WUF5 | |||
|association_with_transcript=0bp_to_ENST00000418234,NM_001142502,uc002pbo.2,uc002pbp.2_5end | |||
|description=CAGE_peak_2_at_PPP1R13L_5end | |||
|id=chr19:45909594..45909625,- | |||
|ontology_enrichment_celltype=CL:0000066!1.07e-12!254 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.94e-13,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!5.67e-12!235;DOID:0050687!6.77e-12!143;DOID:305!1.40e-11!106;DOID:14566!1.75e-10!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,5.99e-12,235;DOID:0050687,7.10e-12,143;DOID:305,1.42e-11,106;DOID:14566,1.77e-10,239 | |||
|ontology_enrichment_uberon=UBERON:0000077!2.77e-08!130;UBERON:0004119!4.59e-08!169;UBERON:0000925!4.59e-08!169;UBERON:0006595!4.59e-08!169;UBERON:0000466!1.02e-07!126;UBERON:0001007!4.85e-07!155;UBERON:0001555!4.85e-07!155;UBERON:0007026!4.85e-07!155;UBERON:0005177!6.90e-07!107;UBERON:0001048!7.24e-07!168 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005177,5.04e-08,101;UBERON:0004119,5.65e-07,160;UBERON:0000925,5.65e-07,160;UBERON:0006595,5.65e-07,160 | |||
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| |||
|short_description=p2@PPP1R13L | |||
}} |
Revision as of 21:15, 11 September 2013
Short description: | p2@PPP1R13L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_PPP1R13L_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000418234, NM_001142502, uc002pbo.2, uc002pbp.2_5end |
EntrezGene: | PPP1R13L |
HGNC: | 18838 |
UniProt: | Q8WUF5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.94e-13 | 253 |
Ontology term | p-value | n |
---|---|---|
trunk region element | 5.04e-08 | 101 |
endoderm-derived structure | 5.65e-07 | 160 |
endoderm | 5.65e-07 | 160 |
presumptive endoderm | 5.65e-07 | 160 |
Ontology term | p-value | n |
---|---|---|
cancer | 5.99e-12 | 235 |
cell type cancer | 7.10e-12 | 143 |
carcinoma | 1.42e-11 | 106 |
disease of cellular proliferation | 1.77e-10 | 239 |
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