FFCP PHASE1:Hg19::chr19:3480542..3480555,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=284422|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=37244|TSSclassifier=S|UniProt=O75264|association_with_transcript=-2bp_to_ENST00000215531,NM_001136503,uc010xhk.1_5end|coexpression_cluster_id=C25|description=CAGE_peak_2_at_C19orf77_5end|id=chr19:3480542..3480555,-|ontology_enrichment_celltype=CL:0002322!1.33e-09!5|ontology_enrichment_celltype_v019=CL:0000182;6.24e-11;12|ontology_enrichment_celltype_v019_2=CL:0000182,5.79e-11,12|ontology_enrichment_development_v019=UBERON:0004161;5.33e-23;11!UBERON:0009497;2.50e-19;13!UBERON:0003104;1.51e-12;31!UBERON:0006242;5.28e-07;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!2.49e-27!115;UBERON:0001950!5.13e-17!20;UBERON:0001869!6.30e-16!32;UBERON:0002619!3.35e-15!22;UBERON:0001893!9.91e-15!34;UBERON:0002791!1.64e-13!33;UBERON:0000956!5.19e-13!25;UBERON:0000203!5.19e-13!25;UBERON:0002020!5.39e-13!34;UBERON:0003528!5.39e-13!34;UBERON:0002780!7.96e-13!41;UBERON:0001890!7.96e-13!41;UBERON:0006240!7.96e-13!41;UBERON:0003080!2.08e-12!42;UBERON:0005172!7.55e-12!55;UBERON:0005173!7.55e-12!55;UBERON:0000178!1.66e-10!15;UBERON:0000179!1.66e-10!15;UBERON:0000463!1.66e-10!15;UBERON:0002417!4.02e-10!61;UBERON:0000916!4.02e-10!61;UBERON:0005409!1.56e-08!35;UBERON:0009497!2.30e-08!25;UBERON:0000015!2.30e-08!25;UBERON:0002423!2.30e-08!25;UBERON:0006235!2.30e-08!25;UBERON:0004161!2.30e-08!25;UBERON:0001871!3.15e-08!7;UBERON:0001049!6.09e-08!57;UBERON:0005068!6.09e-08!57;UBERON:0006241!6.09e-08!57;UBERON:0007135!6.09e-08!57;UBERON:0000200!6.88e-08!6;UBERON:0009856!1.04e-07!26;UBERON:0002616!1.59e-07!59;UBERON:0009854!1.68e-07!23;UBERON:0003056!3.89e-07!61;UBERON:0000025!6.14e-07!194;UBERON:0001017!9.24e-07!82|ontology_enrichment_uberon_v019=UBERON:0000178;9.85e-21;15!UBERON:0000179;9.85e-21;15!UBERON:0000463;9.85e-21;15!UBERON:0005409;3.32e-14;22!UBERON:0000160;3.42e-14;17!UBERON:0002107;1.01e-12;19!UBERON:0006925;1.01e-12;19!UBERON:0002423;2.12e-12;25!UBERON:0002108;8.78e-11;4!UBERON:0004921;1.81e-08;33!UBERON:0002390;2.98e-08;32!UBERON:0005172;2.76e-07;52!UBERON:0005173;2.76e-07;52!UBERON:0002365;3.86e-07;31!UBERON:0002330;3.86e-07;31!UBERON:0001301;6.80e-07;1|ontology_enrichment_uberon_v019_2=UBERON:0000178,9.59e-21,15;UBERON:0000179,9.59e-21,15;UBERON:0000463,9.59e-21,15;UBERON:0000160,3.00e-14,17;UBERON:0005172,4.85e-14,54;UBERON:0005173,4.85e-14,54;UBERON:0002107,8.83e-13,19;UBERON:0006925,8.83e-13,19;UBERON:0008836,8.83e-13,19;UBERON:0005409,1.85e-12,25;UBERON:0009497,1.87e-12,25;UBERON:0000015,1.87e-12,25;UBERON:0002423,1.87e-12,25;UBERON:0006235,1.87e-12,25;UBERON:0004161,1.87e-12,25;UBERON:0002417,2.27e-12,60;UBERON:0000916,2.27e-12,60;UBERON:0008835,6.47e-11,22;UBERON:0003894,6.47e-11,22;UBERON:0002108,8.78e-11,4;UBERON:0009854,2.11e-10,23;UBERON:0007499,1.69e-09,25;UBERON:0009856,4.24e-09,26;UBERON:0007023,2.02e-08,114;UBERON:0002365,1.73e-07,31;UBERON:0002330,1.73e-07,31;UBERON:0005177,2.01e-07,101;UBERON:0004921,4.91e-07,118;UBERON:0001301,6.80e-07,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.0096228809355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.132529768321485,0.348581828608555,0.414644220061482,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77236972004421,0,21.8919420606742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300343057843917,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,1.35359883872224,0.770153371044148,0,0,0.211103257785751,0,0,0,0,0,0.501689773854853,0,2.49322802678617,0.223874754722178,0.219259876645935,0.522870902049801,0,0,0,1.23649213977267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03558180854457,0,0,0,0,1.52234282769651,1.52927441428475,3.98753031021914,1.19115887728894,1.64544909234478,0.648473311192717,2.70015718619057,3.96562588147135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0.276283915531148,0,0,0,0,0.0898683511473268,0,0,0,2.3948309234694,0,0,0.463840490809256,0,0,0,0,0,0.254253650292766,0,0.344743373241465,0,0,0,0.120596438625408,0,0,0,0.658156191461918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,1.99052386215701,49.7131512508766,6.72133159426988,0,0,0,0,0,0,0,0,0,0.789168805698781,16.938700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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=284422 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=37244 | |||
|TSSclassifier=S | |||
|UniProt=O75264 | |||
|association_with_transcript=-2bp_to_ENST00000215531,NM_001136503,uc010xhk.1_5end | |||
|coexpression_cluster_id=C25 | |||
|description=CAGE_peak_2_at_C19orf77_5end | |||
|id=chr19:3480542..3480555,- | |||
|ontology_enrichment_celltype=CL:0002322!1.33e-09!5 | |||
|ontology_enrichment_celltype_v019=CL:0000182;6.24e-11;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,5.79e-11,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;5.33e-23;11!UBERON:0009497;2.50e-19;13!UBERON:0003104;1.51e-12;31!UBERON:0006242;5.28e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.49e-27!115;UBERON:0001950!5.13e-17!20;UBERON:0001869!6.30e-16!32;UBERON:0002619!3.35e-15!22;UBERON:0001893!9.91e-15!34;UBERON:0002791!1.64e-13!33;UBERON:0000956!5.19e-13!25;UBERON:0000203!5.19e-13!25;UBERON:0002020!5.39e-13!34;UBERON:0003528!5.39e-13!34;UBERON:0002780!7.96e-13!41;UBERON:0001890!7.96e-13!41;UBERON:0006240!7.96e-13!41;UBERON:0003080!2.08e-12!42;UBERON:0005172!7.55e-12!55;UBERON:0005173!7.55e-12!55;UBERON:0000178!1.66e-10!15;UBERON:0000179!1.66e-10!15;UBERON:0000463!1.66e-10!15;UBERON:0002417!4.02e-10!61;UBERON:0000916!4.02e-10!61;UBERON:0005409!1.56e-08!35;UBERON:0009497!2.30e-08!25;UBERON:0000015!2.30e-08!25;UBERON:0002423!2.30e-08!25;UBERON:0006235!2.30e-08!25;UBERON:0004161!2.30e-08!25;UBERON:0001871!3.15e-08!7;UBERON:0001049!6.09e-08!57;UBERON:0005068!6.09e-08!57;UBERON:0006241!6.09e-08!57;UBERON:0007135!6.09e-08!57;UBERON:0000200!6.88e-08!6;UBERON:0009856!1.04e-07!26;UBERON:0002616!1.59e-07!59;UBERON:0009854!1.68e-07!23;UBERON:0003056!3.89e-07!61;UBERON:0000025!6.14e-07!194;UBERON:0001017!9.24e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;9.85e-21;15!UBERON:0000179;9.85e-21;15!UBERON:0000463;9.85e-21;15!UBERON:0005409;3.32e-14;22!UBERON:0000160;3.42e-14;17!UBERON:0002107;1.01e-12;19!UBERON:0006925;1.01e-12;19!UBERON:0002423;2.12e-12;25!UBERON:0002108;8.78e-11;4!UBERON:0004921;1.81e-08;33!UBERON:0002390;2.98e-08;32!UBERON:0005172;2.76e-07;52!UBERON:0005173;2.76e-07;52!UBERON:0002365;3.86e-07;31!UBERON:0002330;3.86e-07;31!UBERON:0001301;6.80e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,9.59e-21,15;UBERON:0000179,9.59e-21,15;UBERON:0000463,9.59e-21,15;UBERON:0000160,3.00e-14,17;UBERON:0005172,4.85e-14,54;UBERON:0005173,4.85e-14,54;UBERON:0002107,8.83e-13,19;UBERON:0006925,8.83e-13,19;UBERON:0008836,8.83e-13,19;UBERON:0005409,1.85e-12,25;UBERON:0009497,1.87e-12,25;UBERON:0000015,1.87e-12,25;UBERON:0002423,1.87e-12,25;UBERON:0006235,1.87e-12,25;UBERON:0004161,1.87e-12,25;UBERON:0002417,2.27e-12,60;UBERON:0000916,2.27e-12,60;UBERON:0008835,6.47e-11,22;UBERON:0003894,6.47e-11,22;UBERON:0002108,8.78e-11,4;UBERON:0009854,2.11e-10,23;UBERON:0007499,1.69e-09,25;UBERON:0009856,4.24e-09,26;UBERON:0007023,2.02e-08,114;UBERON:0002365,1.73e-07,31;UBERON:0002330,1.73e-07,31;UBERON:0005177,2.01e-07,101;UBERON:0004921,4.91e-07,118;UBERON:0001301,6.80e-07,1 | |||
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|short_description=p2@C19orf77 | |||
}} |
Revision as of 20:00, 11 September 2013
Short description: | p2@C19orf77 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_C19orf77_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | -2bp_to_ENST00000215531, NM_001136503, uc010xhk.1_5end |
EntrezGene: | C19orf77 |
HGNC: | 37244 |
UniProt: | O75264 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 5.79e-11 | 12 |
Ontology term | p-value | n |
---|---|---|
blood | 9.59e-21 | 15 |
haemolymphatic fluid | 9.59e-21 | 15 |
organism substance | 9.59e-21 | 15 |
intestine | 3.00e-14 | 17 |
abdomen element | 4.85e-14 | 54 |
abdominal segment element | 4.85e-14 | 54 |
liver | 8.83e-13 | 19 |
digestive gland | 8.83e-13 | 19 |
liver bud | 8.83e-13 | 19 |
gastrointestinal system | 1.85e-12 | 25 |
epithelium of foregut-midgut junction | 1.87e-12 | 25 |
anatomical boundary | 1.87e-12 | 25 |
hepatobiliary system | 1.87e-12 | 25 |
foregut-midgut junction | 1.87e-12 | 25 |
septum transversum | 1.87e-12 | 25 |
abdominal segment of trunk | 2.27e-12 | 60 |
abdomen | 2.27e-12 | 60 |
hepatic diverticulum | 6.47e-11 | 22 |
liver primordium | 6.47e-11 | 22 |
small intestine | 8.78e-11 | 4 |
digestive tract diverticulum | 2.11e-10 | 23 |
epithelial sac | 1.69e-09 | 25 |
sac | 4.24e-09 | 26 |
adult organism | 2.02e-08 | 114 |
exocrine gland | 1.73e-07 | 31 |
exocrine system | 1.73e-07 | 31 |
trunk region element | 2.01e-07 | 101 |
subdivision of digestive tract | 4.91e-07 | 118 |
epididymis | 6.80e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.