FFCP PHASE1:Hg19::chr19:23732661..23732689,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C412|description=CAGE_peak_at_chr19:23732661..23732689,+|id=chr19:23732661..23732689,+|ontology_enrichment_celltype=CL:0000077!3.43e-18!19;CL:0000066!3.96e-15!254;CL:0000076!3.15e-12!62;CL:0002149!3.06e-10!6;CL:0002255!3.06e-10!6;CL:0000197!1.21e-09!6;CL:0000098!1.21e-09!6;CL:0002167!1.21e-09!6;CL:0002150!7.04e-07!3;CL:0000861!7.04e-07!3|ontology_enrichment_celltype_v019=CL:0002097;1.44e-12;2!CL:0002149;4.36e-09;6!CL:0002255;4.36e-09;6!CL:0000174;1.17e-08;3!CL:0000077;3.33e-07;19|ontology_enrichment_celltype_v019_2=CL:0002097,1.29e-12,2;CL:0002149,5.43e-09,6;CL:0002255,5.43e-09,6;CL:0000174,1.09e-08,3;CL:0000077,3.76e-07,19|ontology_enrichment_development_v019=UBERON:0008947;3.44e-08;29|ontology_enrichment_disease=DOID:14566!2.19e-23!239;DOID:162!4.27e-22!235;DOID:0050687!1.38e-21!143;DOID:305!5.23e-18!106;DOID:3001!3.06e-10!6;DOID:1749!3.00e-07!14|ontology_enrichment_disease_v019=DOID:3001;4.36e-09;6!DOID:6193;3.12e-07;1|ontology_enrichment_disease_v019_2=DOID:162,3.48e-16,235;DOID:14566,1.02e-15,239;DOID:0050687,2.84e-15,143;DOID:305,2.08e-14,106;DOID:3001,5.43e-09,6;DOID:6193,3.13e-07,1|ontology_enrichment_uberon=UBERON:0001737!4.37e-21!9;UBERON:0001557!5.64e-11!19;UBERON:0005631!3.26e-07!14;UBERON:0000158!3.26e-07!14|ontology_enrichment_uberon_v019=UBERON:0001737;5.92e-21;9!UBERON:0001557;5.92e-21;9!UBERON:0002369;1.17e-08;3!UBERON:0001235;1.17e-08;3!UBERON:0006858;1.17e-08;3!UBERON:0000995;6.09e-08;17!UBERON:0003975;1.74e-07;18!UBERON:0001282;3.31e-07;1!UBERON:0009842;3.31e-07;1!UBERON:0003704;3.31e-07;1!UBERON:0001171;3.31e-07;1!UBERON:0001172;3.31e-07;1!UBERON:0007195;4.06e-07;1|ontology_enrichment_uberon_v019_2=UBERON:0001737,5.36e-21,9;UBERON:0001557,1.15e-09,19;UBERON:0002369,1.09e-08,3;UBERON:0001235,1.09e-08,3;UBERON:0006858,1.09e-08,3;UBERON:0001282,3.32e-07,1;UBERON:0009842,3.32e-07,1;UBERON:0003704,3.32e-07,1;UBERON:0001171,3.32e-07,1;UBERON:0001172,3.32e-07,1;UBERON:0007195,4.18e-07,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0.168776332241266,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41968160047813,1.85443159085912,1.44606617930089,1.43382164552112,0.871517776369625,0.474541238222193,2.02246962240247,0.98110732562673,1.15424147083917,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.201057944823262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24782516918484,0.535286966391485,0.315404830067869,0.702848489956279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47024129588619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67121139316383,0.593929361665277,0.921482106297696,0,0,0,0,0,0,0,0,3.27259784006895,0,0,0,0,0,0,0,5.55684950723184,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,1.19832309870889,0,0,8.20382802098409,0.23056390438806,0,5.10642648033438,1.5950057986596,0.732780747214898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0,0,0,0,0,0,0,7.9690672888342,0.138674673013139,0,0.195984794828755,1.13176968554523,0,9.28724575346729,0.290268993867255,0.219267951258557,0.0821154570532092,0,0,0,0,0,0,3.12882212375685,0,0,1.9980960958213,0,0,0,0,0,0,0,0,1.83596791745379,2.31160471921215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0.236417121897595,0,0,0,1.15149118391667,0,0,0,0,0,0,0,0.082092520749339,0.170388021785422,1.92630555584214,0,0,0,0,0,0,0,0,0,0,0,0,1.91502377331055,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0,1.26184898228651,5.7785949122191,5.57548137574807,0.260994291965212,2.26705925512272,0.694567422971502,4.16052397660995,0.179088841081487,0,1.09642024789354,0.176689145945881,0.38582807654183,0.844712203265363,0,0,0.303859956177382,0,0,0,0,0.655219697692825,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0.346576998451015,0.381382095467167,0,0,0,1.41193548092464,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,1.22354542081276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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C412 | |||
|description=CAGE_peak_at_chr19:23732661..23732689,+ | |||
|id=chr19:23732661..23732689,+ | |||
|ontology_enrichment_celltype=CL:0000077!3.43e-18!19;CL:0000066!3.96e-15!254;CL:0000076!3.15e-12!62;CL:0002149!3.06e-10!6;CL:0002255!3.06e-10!6;CL:0000197!1.21e-09!6;CL:0000098!1.21e-09!6;CL:0002167!1.21e-09!6;CL:0002150!7.04e-07!3;CL:0000861!7.04e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002097;1.44e-12;2!CL:0002149;4.36e-09;6!CL:0002255;4.36e-09;6!CL:0000174;1.17e-08;3!CL:0000077;3.33e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002097,1.29e-12,2;CL:0002149,5.43e-09,6;CL:0002255,5.43e-09,6;CL:0000174,1.09e-08,3;CL:0000077,3.76e-07,19 | |||
|ontology_enrichment_development_v019=UBERON:0008947;3.44e-08;29 | |||
|ontology_enrichment_disease=DOID:14566!2.19e-23!239;DOID:162!4.27e-22!235;DOID:0050687!1.38e-21!143;DOID:305!5.23e-18!106;DOID:3001!3.06e-10!6;DOID:1749!3.00e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:3001;4.36e-09;6!DOID:6193;3.12e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:162,3.48e-16,235;DOID:14566,1.02e-15,239;DOID:0050687,2.84e-15,143;DOID:305,2.08e-14,106;DOID:3001,5.43e-09,6;DOID:6193,3.13e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001737!4.37e-21!9;UBERON:0001557!5.64e-11!19;UBERON:0005631!3.26e-07!14;UBERON:0000158!3.26e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;5.92e-21;9!UBERON:0001557;5.92e-21;9!UBERON:0002369;1.17e-08;3!UBERON:0001235;1.17e-08;3!UBERON:0006858;1.17e-08;3!UBERON:0000995;6.09e-08;17!UBERON:0003975;1.74e-07;18!UBERON:0001282;3.31e-07;1!UBERON:0009842;3.31e-07;1!UBERON:0003704;3.31e-07;1!UBERON:0001171;3.31e-07;1!UBERON:0001172;3.31e-07;1!UBERON:0007195;4.06e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,5.36e-21,9;UBERON:0001557,1.15e-09,19;UBERON:0002369,1.09e-08,3;UBERON:0001235,1.09e-08,3;UBERON:0006858,1.09e-08,3;UBERON:0001282,3.32e-07,1;UBERON:0009842,3.32e-07,1;UBERON:0003704,3.32e-07,1;UBERON:0001171,3.32e-07,1;UBERON:0001172,3.32e-07,1;UBERON:0007195,4.18e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0.168776332241266,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41968160047813,1.85443159085912,1.44606617930089,1.43382164552112,0.871517776369625,0.474541238222193,2.02246962240247,0.98110732562673,1.15424147083917,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.201057944823262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24782516918484,0.535286966391485,0.315404830067869,0.702848489956279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47024129588619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67121139316383,0.593929361665277,0.921482106297696,0,0,0,0,0,0,0,0,3.27259784006895,0,0,0,0,0,0,0,5.55684950723184,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,1.19832309870889,0,0,8.20382802098409,0.23056390438806,0,5.10642648033438,1.5950057986596,0.732780747214898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0,0,0,0,0,0,0,7.9690672888342,0.138674673013139,0,0.195984794828755,1.13176968554523,0,9.28724575346729,0.290268993867255,0.219267951258557,0.0821154570532092,0,0,0,0,0,0,3.12882212375685,0,0,1.9980960958213,0,0,0,0,0,0,0,0,1.83596791745379,2.31160471921215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0.236417121897595,0,0,0,1.15149118391667,0,0,0,0,0,0,0,0.082092520749339,0.170388021785422,1.92630555584214,0,0,0,0,0,0,0,0,0,0,0,0,1.91502377331055,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0,1.26184898228651,5.7785949122191,5.57548137574807,0.260994291965212,2.26705925512272,0.694567422971502,4.16052397660995,0.179088841081487,0,1.09642024789354,0.176689145945881,0.38582807654183,0.844712203265363,0,0,0.303859956177382,0,0,0,0,0.655219697692825,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0.346576998451015,0.381382095467167,0,0,0,1.41193548092464,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,1.22354542081276,0,0,1.96190514319652,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0.709992004383392,0.255640214277473,0,1.14553434272025,25.7471300101386,0.955538938977433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12131862580613,0,0,0,0,0,0,0,0.488419611665847,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr19:23732661..23732689,+ | |||
}} |
Revision as of 19:45, 11 September 2013
Short description: | p@chr19:23732661..23732689, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:23732661..23732689, + |
Coexpression cluster: | C412_serous_breast_papillotubular_ductus_seminal_kidney_clear |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cortical cell of adrenal gland | 1.29e-12 | 2 |
epithelial cell of uterus | 5.43e-09 | 6 |
stromal cell of endometrium | 5.43e-09 | 6 |
steroid hormone secreting cell | 1.09e-08 | 3 |
mesothelial cell | 3.76e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
larynx | 5.36e-21 | 9 |
upper respiratory tract | 1.15e-09 | 19 |
adrenal gland | 1.09e-08 | 3 |
adrenal cortex | 1.09e-08 | 3 |
adrenal/interrenal gland | 1.09e-08 | 3 |
intralobular bile duct | 3.32e-07 | 1 |
acinus | 3.32e-07 | 1 |
intrahepatic bile duct | 3.32e-07 | 1 |
portal lobule | 3.32e-07 | 1 |
hepatic acinus | 3.32e-07 | 1 |
stroma of bone marrow | 4.18e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
cancer | 3.48e-16 | 235 |
disease of cellular proliferation | 1.02e-15 | 239 |
cell type cancer | 2.84e-15 | 143 |
carcinoma | 2.08e-14 | 106 |
female reproductive endometrioid cancer | 5.43e-09 | 6 |
epithelioid sarcoma | 3.13e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.