FFCP PHASE1:Hg19::chr18:56815628..56815675,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C184|description=CAGE_peak_at_chr18:56815628..56815675,+|id=chr18:56815628..56815675,+|ontology_enrichment_celltype=CL:0000167!7.40e-11!1;CL:0000164!7.40e-11!1;CL:0000502!7.40e-11!1;CL:0000172!7.40e-11!1;CL:0000173!7.40e-11!1;CL:0002351!7.40e-11!1;CL:0002553!8.95e-11!1;CL:0000313!3.01e-10!1|ontology_enrichment_celltype_v019=CL:0000167;2.78e-26;1!CL:0000164;2.78e-26;1!CL:0000502;2.78e-26;1!CL:0000172;2.78e-26;1!CL:0000173;2.78e-26;1!CL:0002553;5.23e-26;1|ontology_enrichment_celltype_v019_2=CL:0000167,2.78e-26,1;CL:0000164,2.78e-26,1;CL:0000502,2.78e-26,1;CL:0000172,2.78e-26,1;CL:0000173,2.78e-26,1;CL:0002351,2.78e-26,1;CL:0002553,4.61e-26,1|ontology_enrichment_development_v019=CL:0002351;2.78e-26;1!UBERON:0008801;5.23e-26;1!UBERON:0006298;9.79e-26;1|ontology_enrichment_disease=DOID:4430!7.40e-11!1;DOID:2152!3.01e-10!1;DOID:12603!3.29e-10!1|ontology_enrichment_disease_v019=DOID:4430;2.78e-26;1!DOID:1324;1.33e-07;15!DOID:5409;1.49e-07;4!DOID:0050615;3.50e-07;16|ontology_enrichment_disease_v019_2=DOID:4430,2.78e-26,1;DOID:1324,1.31e-07,15;DOID:5409,1.49e-07,4;DOID:0050615,3.44e-07,16|ontology_enrichment_uberon=UBERON:0001829!1.24e-19!2;UBERON:0001044!1.52e-14!6;UBERON:0003293!1.52e-14!6;UBERON:0003294!1.52e-14!6;UBERON:0010047!1.52e-14!6;UBERON:0000167!1.52e-14!6;UBERON:0001831!9.84e-11!1;UBERON:0001567!9.84e-11!1;UBERON:0008801!9.84e-11!1;UBERON:0001736!1.19e-10!1;UBERON:0006298!1.19e-10!1;UBERON:0007029!1.73e-10!1;UBERON:0004911!3.01e-10!1;UBERON:0003408!6.16e-09!10|ontology_enrichment_uberon_v019=UBERON:0001829;7.50e-50;2!UBERON:0001044;2.66e-37;6!UBERON:0003293;2.66e-37;6!UBERON:0003294;2.66e-37;6!UBERON:0010047;2.66e-37;6!UBERON:0003408;2.66e-37;6!UBERON:0000167;2.66e-37;6!UBERON:0001831;5.23e-26;1!UBERON:0001567;5.23e-26;1!UBERON:0001736;9.79e-26;1!UBERON:0001041;1.79e-16;14!UBERON:0004089;1.00e-13;2!UBERON:0000161;2.47e-12;19!UBERON:0000166;2.47e-12;19!UBERON:0000165;1.39e-08;28!UBERON:0002365;1.15e-07;31!UBERON:0002330;1.15e-07;31|ontology_enrichment_uberon_v019_2=UBERON:0001829,8.50e-50,2;UBERON:0001044,2.83e-37,6;UBERON:0003293,2.83e-37,6;UBERON:0003294,2.83e-37,6;UBERON:0010047,2.83e-37,6;UBERON:0000167,2.83e-37,6;UBERON:0001831,5.93e-26,1;UBERON:0001567,5.93e-26,1;UBERON:0008801,5.93e-26,1;UBERON:0001736,9.79e-26,1;UBERON:0006298,9.79e-26,1;UBERON:0003408,1.01e-22,10;UBERON:0004089,1.07e-13,2;UBERON:0000166,9.70e-11,22;UBERON:0001004,1.39e-08,74;UBERON:0000165,2.64e-08,29;UBERON:0000930,2.64e-08,29;UBERON:0002365,8.28e-08,31;UBERON:0002330,8.28e-08,31;UBERON:0001041,2.53e-07,87;UBERON:0000161,8.32e-07,36|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.78494864019923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471612915298998,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,7.20513673456923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.12735096914337,0,0,0,0,0,0,0.227662191351298,0,0,0,0.135939465953663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29068207646083,0,0,0,0,0,0,0.223710863595585,0,0,0,0,0,0.485710993059139,5.84848658655264,0,0,0,0,20.6819095686343,0.0771741581079447,0,103.940122495897,0,95.4490015761585,0,0,0,0,0,0,0,0,0,0,0,2.75237570042724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404234377916439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr18:56815628..56815675,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C184 | |||
|description=CAGE_peak_at_chr18:56815628..56815675,+ | |||
|id=chr18:56815628..56815675,+ | |||
|ontology_enrichment_celltype=CL:0000167!7.40e-11!1;CL:0000164!7.40e-11!1;CL:0000502!7.40e-11!1;CL:0000172!7.40e-11!1;CL:0000173!7.40e-11!1;CL:0002351!7.40e-11!1;CL:0002553!8.95e-11!1;CL:0000313!3.01e-10!1 | |||
|ontology_enrichment_celltype_v019=CL:0000167;2.78e-26;1!CL:0000164;2.78e-26;1!CL:0000502;2.78e-26;1!CL:0000172;2.78e-26;1!CL:0000173;2.78e-26;1!CL:0002553;5.23e-26;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,2.78e-26,1;CL:0000164,2.78e-26,1;CL:0000502,2.78e-26,1;CL:0000172,2.78e-26,1;CL:0000173,2.78e-26,1;CL:0002351,2.78e-26,1;CL:0002553,4.61e-26,1 | |||
|ontology_enrichment_development_v019=CL:0002351;2.78e-26;1!UBERON:0008801;5.23e-26;1!UBERON:0006298;9.79e-26;1 | |||
|ontology_enrichment_disease=DOID:4430!7.40e-11!1;DOID:2152!3.01e-10!1;DOID:12603!3.29e-10!1 | |||
|ontology_enrichment_disease_v019=DOID:4430;2.78e-26;1!DOID:1324;1.33e-07;15!DOID:5409;1.49e-07;4!DOID:0050615;3.50e-07;16 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,2.78e-26,1;DOID:1324,1.31e-07,15;DOID:5409,1.49e-07,4;DOID:0050615,3.44e-07,16 | |||
|ontology_enrichment_uberon=UBERON:0001829!1.24e-19!2;UBERON:0001044!1.52e-14!6;UBERON:0003293!1.52e-14!6;UBERON:0003294!1.52e-14!6;UBERON:0010047!1.52e-14!6;UBERON:0000167!1.52e-14!6;UBERON:0001831!9.84e-11!1;UBERON:0001567!9.84e-11!1;UBERON:0008801!9.84e-11!1;UBERON:0001736!1.19e-10!1;UBERON:0006298!1.19e-10!1;UBERON:0007029!1.73e-10!1;UBERON:0004911!3.01e-10!1;UBERON:0003408!6.16e-09!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;7.50e-50;2!UBERON:0001044;2.66e-37;6!UBERON:0003293;2.66e-37;6!UBERON:0003294;2.66e-37;6!UBERON:0010047;2.66e-37;6!UBERON:0003408;2.66e-37;6!UBERON:0000167;2.66e-37;6!UBERON:0001831;5.23e-26;1!UBERON:0001567;5.23e-26;1!UBERON:0001736;9.79e-26;1!UBERON:0001041;1.79e-16;14!UBERON:0004089;1.00e-13;2!UBERON:0000161;2.47e-12;19!UBERON:0000166;2.47e-12;19!UBERON:0000165;1.39e-08;28!UBERON:0002365;1.15e-07;31!UBERON:0002330;1.15e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,8.50e-50,2;UBERON:0001044,2.83e-37,6;UBERON:0003293,2.83e-37,6;UBERON:0003294,2.83e-37,6;UBERON:0010047,2.83e-37,6;UBERON:0000167,2.83e-37,6;UBERON:0001831,5.93e-26,1;UBERON:0001567,5.93e-26,1;UBERON:0008801,5.93e-26,1;UBERON:0001736,9.79e-26,1;UBERON:0006298,9.79e-26,1;UBERON:0003408,1.01e-22,10;UBERON:0004089,1.07e-13,2;UBERON:0000166,9.70e-11,22;UBERON:0001004,1.39e-08,74;UBERON:0000165,2.64e-08,29;UBERON:0000930,2.64e-08,29;UBERON:0002365,8.28e-08,31;UBERON:0002330,8.28e-08,31;UBERON:0001041,2.53e-07,87;UBERON:0000161,8.32e-07,36 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.78494864019923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471612915298998,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,7.20513673456923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.12735096914337,0,0,0,0,0,0,0.227662191351298,0,0,0,0.135939465953663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29068207646083,0,0,0,0,0,0,0.223710863595585,0,0,0,0,0,0.485710993059139,5.84848658655264,0,0,0,0,20.6819095686343,0.0771741581079447,0,103.940122495897,0,95.4490015761585,0,0,0,0,0,0,0,0,0,0,0,2.75237570042724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404234377916439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr18:56815628..56815675,+ | |||
}} |
Revision as of 17:54, 11 September 2013
Short description: | p@chr18:56815628..56815675, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:56815628..56815675, + |
Coexpression cluster: | C184_somatostatinoma_smallcell_nonsmall_small_gastrointestinal_pineal_thyroid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 2.78e-26 | 1 |
enteroendocrine cell | 2.78e-26 | 1 |
type D enteroendocrine cell | 2.78e-26 | 1 |
somatostatin secreting cell | 2.78e-26 | 1 |
pancreatic D cell | 2.78e-26 | 1 |
progenitor cell of endocrine pancreas | 2.78e-26 | 1 |
lung fibroblast | 4.61e-26 | 1 |
Ontology term | p-value | n |
---|---|---|
major salivary gland | 8.50e-50 | 2 |
saliva-secreting gland | 2.83e-37 | 6 |
gland of oral region | 2.83e-37 | 6 |
gland of foregut | 2.83e-37 | 6 |
oral gland | 2.83e-37 | 6 |
oral cavity | 2.83e-37 | 6 |
parotid gland | 5.93e-26 | 1 |
cheek | 5.93e-26 | 1 |
parotid gland primordium | 5.93e-26 | 1 |
submandibular gland | 9.79e-26 | 1 |
submandibular gland primordium | 9.79e-26 | 1 |
gland of gut | 1.01e-22 | 10 |
midface | 1.07e-13 | 2 |
oral opening | 9.70e-11 | 22 |
respiratory system | 1.39e-08 | 74 |
mouth | 2.64e-08 | 29 |
stomodeum | 2.64e-08 | 29 |
exocrine gland | 8.28e-08 | 31 |
exocrine system | 8.28e-08 | 31 |
foregut | 2.53e-07 | 87 |
orifice | 8.32e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 2.78e-26 | 1 |
lung cancer | 1.31e-07 | 15 |
lung small cell carcinoma | 1.49e-07 | 4 |
respiratory system cancer | 3.44e-07 | 16 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.