FFCP PHASE1:Hg19::chr18:53068893..53068902,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=6925|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11634|TSSclassifier=S|UniProt=B4DUG3|association_with_transcript=18bp_to_ENST00000537856,uc010xdu.1_5end|coexpression_cluster_id=C1237|description=CAGE_peak_28_at_TCF4_5end|id=chr18:53068893..53068902,-|ontology_enrichment_celltype=CL:0002139!7.80e-18!24;CL:0000222!1.18e-17!119;CL:0000071!1.22e-14!18;CL:0002546!1.22e-14!18;CL:0000115!3.59e-13!35;CL:0000055!1.18e-11!180;CL:0002078!4.73e-11!44;CL:0000393!8.99e-11!60;CL:0000211!8.99e-11!60;CL:0000680!1.13e-10!57;CL:0000056!1.13e-10!57;CL:0000355!1.13e-10!57;CL:0000187!2.15e-10!54;CL:0000183!2.56e-09!59;CL:0000213!8.50e-09!57;CL:0000215!8.50e-09!57;CL:0000192!9.37e-08!42;CL:0000514!9.37e-08!42;CL:0000359!1.26e-07!32;CL:1000413!2.85e-07!9;CL:0002543!8.11e-07!6|ontology_enrichment_celltype_v019=CL:0002139;1.02e-41;24!CL:0000071;1.38e-31;18!CL:0000115;1.69e-28;36!CL:1000413;9.39e-19;9!CL:0002078;3.08e-17;45!CL:0000213;1.33e-13;58!CL:0000215;1.33e-13;58!CL:0002543;6.96e-12;6!CL:0002138;1.30e-11;6!CL:0002544;1.65e-11;6!CL:0002618;2.87e-09;3!CL:0002580;3.33e-09;3!CL:0002579;5.35e-09;3!CL:0002615;7.37e-09;3!CL:0002334;7.76e-08;12|ontology_enrichment_celltype_v019_2=CL:0002139,1.20e-41,24;CL:0000115,6.08e-35,36;CL:0000071,1.68e-31,18;CL:0002546,1.68e-31,18;CL:0002078,1.35e-26,45;CL:0000213,4.98e-21,58;CL:0000215,4.98e-21,58;CL:1000413,1.38e-18,9;CL:0000222,4.69e-15,121;CL:0002543,5.45e-12,6;CL:0005020,1.24e-11,6;CL:0002138,1.24e-11,6;CL:0005022,1.24e-11,6;CL:0002544,2.24e-11,6;CL:0002618,2.42e-09,3;CL:0002580,2.78e-09,3;CL:0002579,4.65e-09,3;CL:0002615,1.49e-08,3;CL:0002334,6.69e-08,12;CL:0000076,2.95e-07,63|ontology_enrichment_development_v019=CL:0002546;1.38e-31;18!CL:0005022;1.30e-11;6|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000055!2.01e-24!69;UBERON:0004872!6.62e-24!84;UBERON:0000025!7.11e-24!194;UBERON:0001981!3.35e-23!60;UBERON:0007500!3.35e-23!60;UBERON:0004537!3.35e-23!60;UBERON:0006965!3.35e-23!60;UBERON:0002049!1.67e-22!79;UBERON:0007798!1.67e-22!79;UBERON:0000483!2.81e-19!309;UBERON:0004111!5.62e-19!241;UBERON:0000119!1.20e-18!312;UBERON:0004535!2.18e-17!110;UBERON:0001009!5.35e-17!113;UBERON:0000475!8.22e-17!365;UBERON:0000477!5.99e-16!286;UBERON:0003914!8.77e-15!118;UBERON:0001986!1.22e-14!18;UBERON:0004638!1.22e-14!18;UBERON:0004852!1.22e-14!18;UBERON:0000490!1.54e-14!138;UBERON:0001637!3.38e-14!42;UBERON:0003509!3.38e-14!42;UBERON:0004572!3.38e-14!42;UBERON:0000468!7.26e-14!659;UBERON:0001017!3.09e-13!82;UBERON:0005743!4.48e-13!86;UBERON:0000073!9.43e-13!94;UBERON:0001016!9.43e-13!94;UBERON:0000487!3.08e-12!22;UBERON:0001893!5.25e-12!34;UBERON:0002020!6.63e-12!34;UBERON:0003528!6.63e-12!34;UBERON:0001049!7.49e-12!57;UBERON:0005068!7.49e-12!57;UBERON:0006241!7.49e-12!57;UBERON:0007135!7.49e-12!57;UBERON:0002791!1.77e-11!33;UBERON:0001869!1.77e-11!32;UBERON:0000955!1.89e-11!69;UBERON:0006238!1.89e-11!69;UBERON:0002616!2.18e-11!59;UBERON:0001134!2.18e-11!61;UBERON:0002036!2.18e-11!61;UBERON:0003082!2.18e-11!61;UBERON:0003075!2.90e-11!86;UBERON:0007284!2.90e-11!86;UBERON:0006914!3.30e-11!25;UBERON:0000467!3.61e-11!625;UBERON:0002385!3.99e-11!63;UBERON:0001015!3.99e-11!63;UBERON:0000383!3.99e-11!63;UBERON:0000480!4.79e-11!626;UBERON:0002346!4.80e-11!90;UBERON:0007023!5.14e-11!115;UBERON:0002780!5.99e-11!41;UBERON:0001890!5.99e-11!41;UBERON:0006240!5.99e-11!41;UBERON:0004573!7.86e-11!33;UBERON:0004571!7.86e-11!33;UBERON:0003080!1.90e-10!42;UBERON:0000956!1.08e-09!25;UBERON:0000203!1.08e-09!25;UBERON:0004290!2.19e-09!70;UBERON:0000947!7.63e-09!21;UBERON:0010191!7.63e-09!21;UBERON:0003056!4.05e-08!61;UBERON:0002619!6.32e-08!22;UBERON:0001638!1.30e-07!9;UBERON:0003920!1.30e-07!9;UBERON:0004582!1.30e-07!9;UBERON:0003915!2.85e-07!9;UBERON:0004700!2.85e-07!9;UBERON:0001917!2.85e-07!9;UBERON:0000914!3.33e-07!83;UBERON:0002329!3.33e-07!83;UBERON:0003077!3.33e-07!83;UBERON:0003059!3.33e-07!83;UBERON:0007282!3.33e-07!83;UBERON:0009618!3.33e-07!83;UBERON:0007285!3.33e-07!83;UBERON:0001950!6.77e-07!20;UBERON:0000481!7.58e-07!347;UBERON:0000486!8.13e-07!82;UBERON:0002050!8.35e-07!605;UBERON:0005423!8.35e-07!605|ontology_enrichment_uberon_v019=UBERON:0004638;1.38e-31;18!UBERON:0001986;1.38e-31;18!UBERON:0004852;1.38e-31;18!UBERON:0000487;1.78e-28;22!UBERON:0006914;1.61e-24;25!UBERON:0000490;1.05e-19;33!UBERON:0003915;9.39e-19;9!UBERON:0004700;9.39e-19;9!UBERON:0001917;9.39e-19;9!UBERON:0003688;3.67e-16;6!UBERON:0002358;3.67e-16;6!UBERON:0003684;3.67e-16;6!UBERON:0001178;3.67e-16;6!UBERON:0000055;1.25e-12;65!UBERON:0007500;4.45e-12;56!UBERON:0001981;4.45e-12;56!UBERON:0004537;4.45e-12;56!UBERON:0004457;1.66e-10;9!UBERON:0000042;1.66e-10;9!UBERON:0001473;1.35e-08;8!UBERON:0004536;1.35e-08;8!UBERON:0006558;1.35e-08;8!UBERON:0002049;5.28e-08;75!UBERON:0007798;5.28e-08;75!UBERON:0001637;5.42e-08;42!UBERON:0003509;5.42e-08;42!UBERON:0004572;5.42e-08;42!UBERON:0001638;9.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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=6925 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11634 | |||
|TSSclassifier=S | |||
|UniProt=B4DUG3 | |||
|association_with_transcript=18bp_to_ENST00000537856,uc010xdu.1_5end | |||
|coexpression_cluster_id=C1237 | |||
|description=CAGE_peak_28_at_TCF4_5end | |||
|id=chr18:53068893..53068902,- | |||
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|ontology_enrichment_celltype_v019_2=CL:0002139,1.20e-41,24;CL:0000115,6.08e-35,36;CL:0000071,1.68e-31,18;CL:0002546,1.68e-31,18;CL:0002078,1.35e-26,45;CL:0000213,4.98e-21,58;CL:0000215,4.98e-21,58;CL:1000413,1.38e-18,9;CL:0000222,4.69e-15,121;CL:0002543,5.45e-12,6;CL:0005020,1.24e-11,6;CL:0002138,1.24e-11,6;CL:0005022,1.24e-11,6;CL:0002544,2.24e-11,6;CL:0002618,2.42e-09,3;CL:0002580,2.78e-09,3;CL:0002579,4.65e-09,3;CL:0002615,1.49e-08,3;CL:0002334,6.69e-08,12;CL:0000076,2.95e-07,63 | |||
|ontology_enrichment_development_v019=CL:0002546;1.38e-31;18!CL:0005022;1.30e-11;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!2.01e-24!69;UBERON:0004872!6.62e-24!84;UBERON:0000025!7.11e-24!194;UBERON:0001981!3.35e-23!60;UBERON:0007500!3.35e-23!60;UBERON:0004537!3.35e-23!60;UBERON:0006965!3.35e-23!60;UBERON:0002049!1.67e-22!79;UBERON:0007798!1.67e-22!79;UBERON:0000483!2.81e-19!309;UBERON:0004111!5.62e-19!241;UBERON:0000119!1.20e-18!312;UBERON:0004535!2.18e-17!110;UBERON:0001009!5.35e-17!113;UBERON:0000475!8.22e-17!365;UBERON:0000477!5.99e-16!286;UBERON:0003914!8.77e-15!118;UBERON:0001986!1.22e-14!18;UBERON:0004638!1.22e-14!18;UBERON:0004852!1.22e-14!18;UBERON:0000490!1.54e-14!138;UBERON:0001637!3.38e-14!42;UBERON:0003509!3.38e-14!42;UBERON:0004572!3.38e-14!42;UBERON:0000468!7.26e-14!659;UBERON:0001017!3.09e-13!82;UBERON:0005743!4.48e-13!86;UBERON:0000073!9.43e-13!94;UBERON:0001016!9.43e-13!94;UBERON:0000487!3.08e-12!22;UBERON:0001893!5.25e-12!34;UBERON:0002020!6.63e-12!34;UBERON:0003528!6.63e-12!34;UBERON:0001049!7.49e-12!57;UBERON:0005068!7.49e-12!57;UBERON:0006241!7.49e-12!57;UBERON:0007135!7.49e-12!57;UBERON:0002791!1.77e-11!33;UBERON:0001869!1.77e-11!32;UBERON:0000955!1.89e-11!69;UBERON:0006238!1.89e-11!69;UBERON:0002616!2.18e-11!59;UBERON:0001134!2.18e-11!61;UBERON:0002036!2.18e-11!61;UBERON:0003082!2.18e-11!61;UBERON:0003075!2.90e-11!86;UBERON:0007284!2.90e-11!86;UBERON:0006914!3.30e-11!25;UBERON:0000467!3.61e-11!625;UBERON:0002385!3.99e-11!63;UBERON:0001015!3.99e-11!63;UBERON:0000383!3.99e-11!63;UBERON:0000480!4.79e-11!626;UBERON:0002346!4.80e-11!90;UBERON:0007023!5.14e-11!115;UBERON:0002780!5.99e-11!41;UBERON:0001890!5.99e-11!41;UBERON:0006240!5.99e-11!41;UBERON:0004573!7.86e-11!33;UBERON:0004571!7.86e-11!33;UBERON:0003080!1.90e-10!42;UBERON:0000956!1.08e-09!25;UBERON:0000203!1.08e-09!25;UBERON:0004290!2.19e-09!70;UBERON:0000947!7.63e-09!21;UBERON:0010191!7.63e-09!21;UBERON:0003056!4.05e-08!61;UBERON:0002619!6.32e-08!22;UBERON:0001638!1.30e-07!9;UBERON:0003920!1.30e-07!9;UBERON:0004582!1.30e-07!9;UBERON:0003915!2.85e-07!9;UBERON:0004700!2.85e-07!9;UBERON:0001917!2.85e-07!9;UBERON:0000914!3.33e-07!83;UBERON:0002329!3.33e-07!83;UBERON:0003077!3.33e-07!83;UBERON:0003059!3.33e-07!83;UBERON:0007282!3.33e-07!83;UBERON:0009618!3.33e-07!83;UBERON:0007285!3.33e-07!83;UBERON:0001950!6.77e-07!20;UBERON:0000481!7.58e-07!347;UBERON:0000486!8.13e-07!82;UBERON:0002050!8.35e-07!605;UBERON:0005423!8.35e-07!605 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.38e-31;18!UBERON:0001986;1.38e-31;18!UBERON:0004852;1.38e-31;18!UBERON:0000487;1.78e-28;22!UBERON:0006914;1.61e-24;25!UBERON:0000490;1.05e-19;33!UBERON:0003915;9.39e-19;9!UBERON:0004700;9.39e-19;9!UBERON:0001917;9.39e-19;9!UBERON:0003688;3.67e-16;6!UBERON:0002358;3.67e-16;6!UBERON:0003684;3.67e-16;6!UBERON:0001178;3.67e-16;6!UBERON:0000055;1.25e-12;65!UBERON:0007500;4.45e-12;56!UBERON:0001981;4.45e-12;56!UBERON:0004537;4.45e-12;56!UBERON:0004457;1.66e-10;9!UBERON:0000042;1.66e-10;9!UBERON:0001473;1.35e-08;8!UBERON:0004536;1.35e-08;8!UBERON:0006558;1.35e-08;8!UBERON:0002049;5.28e-08;75!UBERON:0007798;5.28e-08;75!UBERON:0001637;5.42e-08;42!UBERON:0003509;5.42e-08;42!UBERON:0004572;5.42e-08;42!UBERON:0001638;9.22e-08;9!UBERON:0003920;9.22e-08;9!UBERON:0004582;9.22e-08;9!UBERON:0003914;4.77e-07;74!UBERON:0002465;8.75e-07;10!UBERON:0000947;8.95e-07;21!UBERON:0010191;8.95e-07;21 | |||
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|phase1_expression=4.54195948176392,0.642301571672949,4.22863212287913,1.0007329835313,2.23480547213644,0.872338524100369,2.53299878168311,0.631719873426831,0.522371256399677,0,0,0,0,0.123766352960047,0,1.34465029290355,0,1.46062018077475,0.487932798790507,0.369363174230364,0,0,0.85870796139317,1.23186982565596,0.87879847716362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.895037932904712,0,0,0.579386075843295,0,1.94653948121054,0,0,0.087834785693126,0.261958150995425,0,0,0,0,0,0,0,0,3.18019851786728,0,3.47140501607594,1.13061588384802,3.35599548967925,2.75118041940067,2.08994966536811,5.94358546089456,12.4518191940349,7.02913286805807,1.20848795132744,4.56163263431108,0.732186172644509,3.30896772311282,2.43042584364528,7.5011771758627,2.91888184414021,2.47745257063309,4.5994991239765,0.949265659568129,2.5648244150257,0,0,0,0.993943903390637,0.759783069987479,0.662045904066094,0.860509862246441,0.354668382198357,0,0,0,1.8672662123986,0.942974704487816,1.14423332179421,0.151357427644931,0.576175924479999,0,0,0.570471821544449,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0.89694817844431,0.213557388818567,0,0.900273288253207,0.92747276314595,1.03056216018252,0.744467425326359,1.85653965465393,1.36411807225678,1.26216887122057,1.19664868234989,0.646584227275248,0.355009592516614,0.604512589365842,0.508681776931463,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0.721879481669586,0.118306800039844,0,0,0,0,0,0,0,0,3.69077727312324,0,0,1.47008711385542,0,0,1.18157981336281,0,0,0.171567810298526,0,0,0,0,0,0,0,1.15930404975077,0.587043471179108,1.15493158208859,0,1.71228737011138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775630294546667,0,0.845302752556,0,0,0,0,0,0.714889968290738,0.542621605391443,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,1.42636905040718,0.144781306667579,0,1.07436577943937,0,0,0,0,3.04913549066956,0,0.773288812777695,1.84267891867784,1.27587750330633,0,0,0,0.49076596687656,0,0,0,0,0,0,0,0,0,0,0,0.347534457872331,0,0,0,0,0,0,0,0,2.97729369382532,4.29693525206575,2.52594084989766,3.07533958213682,4.09365799253363,1.60853921143608,0,0.462629081407967,0,0.246381468041427,0,0.464841513839837,0,0,0,0,0,0.131124414959424,0,0,0,0,0,3.4120015221269,0.850468526382578,1.29549549661284,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0.103041011647722,0.0915694648183434,0,0,0,1.6068392984416,0.193341436584244,0.154048617114644,0.15350367472613,0,0.859361958946189,0.290033387828457,0.170453254832202,1.06838442776085,0,0,0,0,0.929691098594572,0.94443704049192,0.6970372701606,0.308033580176089,0,1.73986598415015,0.74129687641568,0.429374660225974,0,0,0.190630193923825,0,0,0.318203247925937,0.78494864019923,0.719489830333259,0.54907405947211,0.117812402345686,0.202182481573316,0,1.26377536871694,0,0.487426979262569,0,0.272999822815972,0.424216295861138,1.13008116620243,1.10273068709225,0,0.438450885253763,0,0,0.202910376962704,0.30982349809975,0.563391205064483,0.430234056612155,0.687743287091848,0,0.354761064070598,0,0,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0,1.92495971052672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,0,0.20453736500431,0,0,0,0,0,0.295930216910801,0,0,0.969332746095218,0.463840490809256,1.99613798001194,0,0,0,0,0,0,0,0,0,0.885741385813839,0.120596438625408,0,0.331737779793674,0,0.438770794307945,0,0,0.615602068030377,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0.611030144933625,0,0,0,0.471807930864739,0.802577647298789,0.937057782901357,0,0,0,0,0,2.14250933141343,0.505492637027904,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0.343972064943233,0,0,0,0.387956065953678,0,0.225980740780532,0,0,0.379864775735272,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0.209205692624666,0.101998217636322,0,0,0.410716136675979,0,0.429765441419957,0,0.279282401272254,0,2.15361907373044,0,0,0.446342914883745,0.403100834920358,2.16179930125442,0,0,0,0,0,0,2.38568906942791,0.408610218334727,0,0,0,0,0,0.485996453264197,0,0.0788057072991982,0.209818352539992,0,0.179287339332845,0,0.714695326373367,0,0,0,0,0,1.19730191562487,0,0.340776043570843,0,0.146552233678082,0,0.646414781807753,0.39669780522807,0,0,0.747511887973863,0.314408610199332,0.414239055347196,0,0,0,0,0,0.2506898940227,0,0,0,0,1.34228891392159,0.1251909307065,0.573409195690071,0.332787154610557,0.496771223531068,0,0,0,0,0,0,0,0.597019211547496,0.701139929541673,0,0,0,0,0,0.151230923763239,0.932623203496683,0.147855149989634,0.318593534327405,0,0.155262956876259,0.414706207840855,0,0,0.150257608997218,0,0,0.181848659202559,0.214821114084977,0.464033759878494,0,0,1.71697852591396,0.336749488765919,0,0.57785949122191,0,0,0,0,0,0.537266523244462,0,0.657852148736121,0.176689145945881,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1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| |||
|short_description=p28@TCF4 | |||
}} |
Revision as of 17:45, 11 September 2013
Short description: | p28@TCF4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_28_at_TCF4_5end |
Coexpression cluster: | C1237_Endothelial_Preadipocyte_Lymphatic_Renal_lung_heart_skin |
Association with transcript: | 18bp_to_ENST00000537856, uc010xdu.1_5end |
EntrezGene: | TCF4 |
HGNC: | 11634 |
UniProt: | B4DUG3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 1.20e-41 | 24 |
endothelial cell | 6.08e-35 | 36 |
blood vessel endothelial cell | 1.68e-31 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.68e-31 | 18 |
meso-epithelial cell | 1.35e-26 | 45 |
lining cell | 4.98e-21 | 58 |
barrier cell | 4.98e-21 | 58 |
endothelial cell of artery | 1.38e-18 | 9 |
mesodermal cell | 4.69e-15 | 121 |
vein endothelial cell | 5.45e-12 | 6 |
lymphangioblast | 1.24e-11 | 6 |
endothelial cell of lymphatic vessel | 1.24e-11 | 6 |
vascular lymphangioblast | 1.24e-11 | 6 |
aortic endothelial cell | 2.24e-11 | 6 |
endothelial cell of umbilical vein | 2.42e-09 | 3 |
preadipocyte of the breast | 2.78e-09 | 3 |
omentum preadipocyte | 4.65e-09 | 3 |
adipocyte of omentum tissue | 1.49e-08 | 3 |
preadipocyte | 6.69e-08 | 12 |
squamous epithelial cell | 2.95e-07 | 63 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.