FFCP PHASE1:Hg19::chr18:41513341..41513354,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr18:41513341..41513354,-|id=chr18:41513341..41513354,-|ontology_enrichment_celltype=CL:0000136!7.84e-09!15;CL:0002617!1.10e-08!2|ontology_enrichment_celltype_v019=CL:0002521;4.06e-27;3!CL:0000153;7.57e-10;9!CL:0000447;7.57e-10;9!CL:0000594;7.02e-08;3!CL:0000214;7.02e-08;3!CL:0000136;5.26e-07;13|ontology_enrichment_celltype_v019_2=CL:0002521,3.11e-27,3;CL:0000153,8.46e-10,9;CL:0000447,8.46e-10,9;CL:0000594,6.34e-08,3;CL:0000214,8.29e-08,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3371;1.53e-21;1!DOID:4549;1.53e-21;1!DOID:5861;1.53e-21;1!DOID:6496;1.53e-21;1!DOID:1115;2.68e-16;20!DOID:3193;2.23e-11;2!DOID:962;2.23e-11;2!DOID:154;3.52e-11;2!DOID:4236;3.52e-11;2!DOID:1192;5.18e-08;3|ontology_enrichment_disease_v019_2=DOID:3371,1.53e-21,1;DOID:4549,1.53e-21,1;DOID:5861,1.53e-21,1;DOID:6496,1.53e-21,1;DOID:1115,3.14e-16,20;DOID:3193,2.23e-11,2;DOID:962,2.23e-11,2;DOID:154,4.09e-11,2;DOID:4236,4.09e-11,2;DOID:1192,5.18e-08,3|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0002190;4.06e-27;3!UBERON:0002072;1.03e-16;5!UBERON:0001013;2.61e-13;14!UBERON:0003714;2.23e-11;2!UBERON:0002418;4.52e-08;3!UBERON:0004755;4.52e-08;3!UBERON:0006915;7.02e-08;3!UBERON:0007616;7.02e-08;3!UBERON:0002217;7.02e-08;3!UBERON:0002018;7.02e-08;3|ontology_enrichment_uberon_v019_2=UBERON:0002190,3.11e-27,3;UBERON:0002072,8.82e-17,5;UBERON:0001013,2.35e-13,14;UBERON:0003714,2.23e-11,2;UBERON:0002418,4.52e-08,3;UBERON:0004755,4.52e-08,3;UBERON:0006915,8.29e-08,3;UBERON:0007616,8.29e-08,3;UBERON:0002217,8.29e-08,3;UBERON:0002018,8.29e-08,3|phase1_expression=0.54503513781167,0.428201047781966,0,0,0.446961094427288,0,0,1.26343974685366,1.82829939739887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65147236858747,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260650843404249,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0.307007349452259,0,1.71872391789238,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46508179271894,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,2.17499872630438,0,0,0,0,0,1.21537496453305,0,0,0,0,0,0,0,0,0.461701551022782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.290967049465258,4.32455020788351,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,2.67939404817274,0.419636705079985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.612691153526923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0.212574920101683,0,2.23457967189298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.992422356778588,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0.297046400327086,0.4226557275834,0,0,0,0,0,0,0,0.730336388246517,0,0,1.10440093535229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,0,0,0,0,0,0.202117188958219,0,0.342233301085281,0,0,0.665320713092027,0,0,0,0,0,0.122241444182866,0,0,0,0|short_description=p@chr18:41513341..41513354,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr18:41513341..41513354,- | |||
|id=chr18:41513341..41513354,- | |||
|ontology_enrichment_celltype=CL:0000136!7.84e-09!15;CL:0002617!1.10e-08!2 | |||
|ontology_enrichment_celltype_v019=CL:0002521;4.06e-27;3!CL:0000153;7.57e-10;9!CL:0000447;7.57e-10;9!CL:0000594;7.02e-08;3!CL:0000214;7.02e-08;3!CL:0000136;5.26e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002521,3.11e-27,3;CL:0000153,8.46e-10,9;CL:0000447,8.46e-10,9;CL:0000594,6.34e-08,3;CL:0000214,8.29e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;1.53e-21;1!DOID:4549;1.53e-21;1!DOID:5861;1.53e-21;1!DOID:6496;1.53e-21;1!DOID:1115;2.68e-16;20!DOID:3193;2.23e-11;2!DOID:962;2.23e-11;2!DOID:154;3.52e-11;2!DOID:4236;3.52e-11;2!DOID:1192;5.18e-08;3 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,1.53e-21,1;DOID:4549,1.53e-21,1;DOID:5861,1.53e-21,1;DOID:6496,1.53e-21,1;DOID:1115,3.14e-16,20;DOID:3193,2.23e-11,2;DOID:962,2.23e-11,2;DOID:154,4.09e-11,2;DOID:4236,4.09e-11,2;DOID:1192,5.18e-08,3 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002190;4.06e-27;3!UBERON:0002072;1.03e-16;5!UBERON:0001013;2.61e-13;14!UBERON:0003714;2.23e-11;2!UBERON:0002418;4.52e-08;3!UBERON:0004755;4.52e-08;3!UBERON:0006915;7.02e-08;3!UBERON:0007616;7.02e-08;3!UBERON:0002217;7.02e-08;3!UBERON:0002018;7.02e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002190,3.11e-27,3;UBERON:0002072,8.82e-17,5;UBERON:0001013,2.35e-13,14;UBERON:0003714,2.23e-11,2;UBERON:0002418,4.52e-08,3;UBERON:0004755,4.52e-08,3;UBERON:0006915,8.29e-08,3;UBERON:0007616,8.29e-08,3;UBERON:0002217,8.29e-08,3;UBERON:0002018,8.29e-08,3 | |||
|phase1_expression=0.54503513781167,0.428201047781966,0,0,0.446961094427288,0,0,1.26343974685366,1.82829939739887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65147236858747,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260650843404249,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0.307007349452259,0,1.71872391789238,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46508179271894,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,2.17499872630438,0,0,0,0,0,1.21537496453305,0,0,0,0,0,0,0,0,0.461701551022782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.290967049465258,4.32455020788351,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,2.67939404817274,0.419636705079985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.612691153526923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0.212574920101683,0,2.23457967189298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.992422356778588,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0.297046400327086,0.4226557275834,0,0,0,0,0,0,0,0.730336388246517,0,0,1.10440093535229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,0,0,0,0,0,0.202117188958219,0,0.342233301085281,0,0,0.665320713092027,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p@chr18:41513341..41513354,- | |||
}} |
Revision as of 17:31, 11 September 2013
Short description: | p@chr18:41513341..41513354, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:41513341..41513354, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
subcutaneous fat cell | 3.11e-27 | 3 |
GAG secreting cell | 8.46e-10 | 9 |
carbohydrate secreting cell | 8.46e-10 | 9 |
skeletal muscle satellite cell | 6.34e-08 | 3 |
synovial cell | 8.29e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
subcutaneous adipose tissue | 3.11e-27 | 3 |
hypodermis | 8.82e-17 | 5 |
adipose tissue | 2.35e-13 | 14 |
neural tissue | 2.23e-11 | 2 |
cartilage tissue | 4.52e-08 | 3 |
skeletal tissue | 4.52e-08 | 3 |
stratified squamous epithelium | 8.29e-08 | 3 |
layer of synovial tissue | 8.29e-08 | 3 |
synovial joint | 8.29e-08 | 3 |
synovial membrane of synovial joint | 8.29e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 1.53e-21 | 1 |
extraosseous chondrosarcoma | 1.53e-21 | 1 |
myxoid chondrosarcoma | 1.53e-21 | 1 |
extraskeletal myxoid chondrosarcoma | 1.53e-21 | 1 |
sarcoma | 3.14e-16 | 20 |
peripheral nerve sheath neoplasm | 2.23e-11 | 2 |
neurofibroma | 2.23e-11 | 2 |
mixed cell type cancer | 4.09e-11 | 2 |
carcinosarcoma | 4.09e-11 | 2 |
peripheral nervous system neoplasm | 5.18e-08 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.