FFCP PHASE1:Hg19::chr17:7154899..7154910,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=23399|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=19085|TSSclassifier=S|UniProt=O95476|association_with_transcript=84bp_to_NM_001143775,uc002gfc.2,uc002gfd.2_5end|description=CAGE_peak_5_at_CTDNEP1_5end|id=chr17:7154899..7154910,-|ontology_enrichment_celltype=CL:0000213!5.29e-10!57;CL:0000215!5.29e-10!57;CL:0002321!2.18e-09!248;CL:0000220!2.38e-09!246;CL:0000115!2.93e-09!35;CL:0002139!5.92e-09!24;CL:0002078!1.66e-07!44;CL:0000071!3.01e-07!18;CL:0002546!3.01e-07!18;CL:0000222!4.36e-07!119;CL:0000066!9.17e-07!254|ontology_enrichment_celltype_v019=CL:0000115;5.62e-08;36!CL:0002139;6.37e-08;24|ontology_enrichment_celltype_v019_2=CL:0000115,5.72e-10,36;CL:0002078,3.04e-08,45;CL:0002139,3.94e-08,24;CL:0000213,4.32e-07,58;CL:0000215,4.32e-07,58;CL:0002144,6.24e-07,3;CL:0000071,9.01e-07,18;CL:0002546,9.01e-07,18|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001986!3.01e-07!18;UBERON:0004638!3.01e-07!18;UBERON:0004852!3.01e-07!18;UBERON:0000487!6.38e-07!22|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0010523,6.24e-07,3;UBERON:0001915,6.24e-07,3;UBERON:0001982,6.24e-07,3;UBERON:0004638,9.01e-07,18;UBERON:0001986,9.01e-07,18;UBERON:0004852,9.01e-07,18|phase1_expression=0.908391896352783,0.642301571672949,0.422863212287913,0,0.893922188854576,0.872338524100369,5.06599756336621,1.26343974685366,0,0.982935746006035,3.48900583986214,0.218441372130172,0,1.23766352960047,0.662794751455832,0,0.602694528023977,0,0,0.738726348460727,1.02000345622126,0.626909442956176,0,0.684372125364421,0.376627918784408,0.0764134057479513,0.0821005894499457,0.0787107813136792,0,0,0.154816123316076,0.919421224478927,0.6024118375565,1.10926203050036,0.154934401160603,0.142169232487422,0,0,0.200544447470142,0,0.223915474239924,0.32389366601898,0,0.581592955118259,0,0,0.232429036905685,0.411167888021826,0.309706370895104,0,0,0,0,0,1.35426486594342,0.564727018627814,0,0.449446968890169,0,0.320929027076094,0,0,0.199463657621632,0.852449501065388,0,0,0,0,0,0,0,0,0,0,0.637812899895131,0.209658645508376,0.112328631146495,0.300353785683013,0.16072558669708,0,0,0.182664153764634,0,0,0,0.853460445133014,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0.32592226663359,0,0,0.334231370655521,0,0,0,0.128091319725675,0.390178042679635,0.493313713811028,0,0,0,0,0,0.113309342697566,0,0,0.253019692019503,0.318565414324097,0,0,0,0.127986611154418,0,0,0,0.201606743224732,0,0.144824403882799,0,0.670700859703636,0.639312809217652,0.722878304769133,0.50133791063589,0,0,0.486634870302636,0.189069634328136,0.665188192387692,1.05401742831751,0.523916301990851,0.364295288292542,0.370784442784429,0.649094787309367,0.522389211897802,0.26591592103773,0,0.571994910780128,0,1.59009925893364,0.860234595106124,1.38856200643038,0.56530794192401,0.838998872419812,1.10047216776027,0.626984899610432,1.29208379584664,0.35576626268671,0.66944122552934,2.81980521976403,3.04108842287405,1.95249646038536,0.735326160691737,1.62028389576352,0.803697554556718,0.22452937262617,0.337834441449967,3.06633274931766,0.949265659568129,1.64881569537367,0,0,0.436094052142534,0,0.506522046658319,0.529636723252875,0.286836620748814,0.354668382198357,1.68203280042692,0,1.72667283892012,0.311211035399766,0.269421344139376,0.817309515567294,1.51357427644931,1.72852777344,0.70296429550139,1.87296046098192,0.570471821544449,0.298897361103602,0.23486899728753,0,0.140450806702248,0,0.61417158655884,0.206651562351531,1.18800285728205,0.247266929278557,0,1.43723628363248,0.168336113954066,0.125118519871964,0.831192346452549,0,0.30648779579902,0.45071417671979,0.680593098960126,0.179389635688862,0,0.211931901159562,0.300091096084402,0.309157587715317,0.257640540045629,0.744467425326359,0,0.292311015483596,0,0.0920498986422993,0.161646056818812,0.355009592516614,0.10075209822764,0.339121184620975,0.193260853163297,0.272746120590835,0.286804595389004,0.121973706129595,0.795178609928912,0.813357600086629,0.414644220061482,0.504641701751257,0.72995471815166,0,0,0,0.928735856063958,0,0.473227200159376,0.842923450390509,0.964044119533928,0.882351781859152,0.217879444092406,0,0.539325232640658,0,0,0.738155454624648,2.80483547606892,0.4115740113314,0,0,0,0,0,0.860919069801795,0.343135620597051,1.42675371031213,1.1240175325762,0.301586917234893,0,0.977424915930974,1.03993478527958,0,0.34779121492523,0.352226082707465,1.29929802984966,0.925971025153221,1.33177906564219,0.790204397959275,0.858486162094873,0.738651018262192,0.234004265139238,0.594524649154913,0,0.335964256397719,0.425325291727159,0.268675568108545,0.871901815541886,0.766765358330422,0,0.176096868026452,1.03664057770386,0.432359860250884,0.88369703398466,0.190493682876507,0.763976851116555,2.34434894420094,0,0.308482478109971,0.600686115687835,0.285826432630578,0.897048674762886,0.87192013766656,0.66004457238855,0.517086863031111,3.576564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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=23399 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19085 | |||
|TSSclassifier=S | |||
|UniProt=O95476 | |||
|association_with_transcript=84bp_to_NM_001143775,uc002gfc.2,uc002gfd.2_5end | |||
|description=CAGE_peak_5_at_CTDNEP1_5end | |||
|id=chr17:7154899..7154910,- | |||
|ontology_enrichment_celltype=CL:0000213!5.29e-10!57;CL:0000215!5.29e-10!57;CL:0002321!2.18e-09!248;CL:0000220!2.38e-09!246;CL:0000115!2.93e-09!35;CL:0002139!5.92e-09!24;CL:0002078!1.66e-07!44;CL:0000071!3.01e-07!18;CL:0002546!3.01e-07!18;CL:0000222!4.36e-07!119;CL:0000066!9.17e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0000115;5.62e-08;36!CL:0002139;6.37e-08;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,5.72e-10,36;CL:0002078,3.04e-08,45;CL:0002139,3.94e-08,24;CL:0000213,4.32e-07,58;CL:0000215,4.32e-07,58;CL:0002144,6.24e-07,3;CL:0000071,9.01e-07,18;CL:0002546,9.01e-07,18 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!3.01e-07!18;UBERON:0004638!3.01e-07!18;UBERON:0004852!3.01e-07!18;UBERON:0000487!6.38e-07!22 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010523,6.24e-07,3;UBERON:0001915,6.24e-07,3;UBERON:0001982,6.24e-07,3;UBERON:0004638,9.01e-07,18;UBERON:0001986,9.01e-07,18;UBERON:0004852,9.01e-07,18 | |||
|phase1_expression=0.908391896352783,0.642301571672949,0.422863212287913,0,0.893922188854576,0.872338524100369,5.06599756336621,1.26343974685366,0,0.982935746006035,3.48900583986214,0.218441372130172,0,1.23766352960047,0.662794751455832,0,0.602694528023977,0,0,0.738726348460727,1.02000345622126,0.626909442956176,0,0.684372125364421,0.376627918784408,0.0764134057479513,0.0821005894499457,0.0787107813136792,0,0,0.154816123316076,0.919421224478927,0.6024118375565,1.10926203050036,0.154934401160603,0.142169232487422,0,0,0.200544447470142,0,0.223915474239924,0.32389366601898,0,0.581592955118259,0,0,0.232429036905685,0.411167888021826,0.309706370895104,0,0,0,0,0,1.35426486594342,0.564727018627814,0,0.449446968890169,0,0.320929027076094,0,0,0.199463657621632,0.852449501065388,0,0,0,0,0,0,0,0,0,0,0.637812899895131,0.209658645508376,0.112328631146495,0.300353785683013,0.16072558669708,0,0,0.182664153764634,0,0,0,0.853460445133014,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0.32592226663359,0,0,0.334231370655521,0,0,0,0.128091319725675,0.390178042679635,0.493313713811028,0,0,0,0,0,0.113309342697566,0,0,0.253019692019503,0.318565414324097,0,0,0,0.127986611154418,0,0,0,0.201606743224732,0,0.144824403882799,0,0.670700859703636,0.639312809217652,0.722878304769133,0.50133791063589,0,0,0.486634870302636,0.189069634328136,0.665188192387692,1.05401742831751,0.523916301990851,0.364295288292542,0.370784442784429,0.649094787309367,0.522389211897802,0.26591592103773,0,0.571994910780128,0,1.59009925893364,0.860234595106124,1.38856200643038,0.56530794192401,0.838998872419812,1.10047216776027,0.626984899610432,1.29208379584664,0.35576626268671,0.66944122552934,2.81980521976403,3.04108842287405,1.95249646038536,0.735326160691737,1.62028389576352,0.803697554556718,0.22452937262617,0.337834441449967,3.06633274931766,0.949265659568129,1.64881569537367,0,0,0.436094052142534,0,0.506522046658319,0.529636723252875,0.286836620748814,0.354668382198357,1.68203280042692,0,1.72667283892012,0.311211035399766,0.269421344139376,0.817309515567294,1.51357427644931,1.72852777344,0.70296429550139,1.87296046098192,0.570471821544449,0.298897361103602,0.23486899728753,0,0.140450806702248,0,0.61417158655884,0.206651562351531,1.18800285728205,0.247266929278557,0,1.43723628363248,0.168336113954066,0.125118519871964,0.831192346452549,0,0.30648779579902,0.45071417671979,0.680593098960126,0.179389635688862,0,0.211931901159562,0.300091096084402,0.309157587715317,0.257640540045629,0.744467425326359,0,0.292311015483596,0,0.0920498986422993,0.161646056818812,0.355009592516614,0.10075209822764,0.339121184620975,0.193260853163297,0.272746120590835,0.286804595389004,0.121973706129595,0.795178609928912,0.813357600086629,0.414644220061482,0.504641701751257,0.72995471815166,0,0,0,0.928735856063958,0,0.473227200159376,0.842923450390509,0.964044119533928,0.882351781859152,0.217879444092406,0,0.539325232640658,0,0,0.738155454624648,2.80483547606892,0.4115740113314,0,0,0,0,0,0.860919069801795,0.343135620597051,1.42675371031213,1.1240175325762,0.301586917234893,0,0.977424915930974,1.03993478527958,0,0.34779121492523,0.352226082707465,1.29929802984966,0.925971025153221,1.33177906564219,0.790204397959275,0.858486162094873,0.738651018262192,0.234004265139238,0.594524649154913,0,0.335964256397719,0.425325291727159,0.268675568108545,0.871901815541886,0.766765358330422,0,0.176096868026452,1.03664057770386,0.432359860250884,0.88369703398466,0.190493682876507,0.763976851116555,2.34434894420094,0,0.308482478109971,0.600686115687835,0.285826432630578,0.897048674762886,0.87192013766656,0.66004457238855,0.517086863031111,3.57656445851882,0.845302752556,0.26593811658487,0,1.02882949704857,1.41849132023278,0.799266537048298,0.57191197463259,0,0,0.325736184293735,0.355391948742546,0,0.301439377059586,1.74306691720059,0.499864955910285,0,0.502257091432126,0,0.239624855491583,0,0,0.868687840005475,0.205476322550383,0.358121926479791,0.224170287987055,0,0,0,0.508189248444927,1.30139853857622,1.54657762555539,1.34013012267479,0,0,0,1.24324654030811,0.981531933753119,2.00068208423871,1.08506009479894,0,0.356857977594324,0.157702415033935,0,0.300946099727719,2.27407504055985,6.2083842775503,0.664225598535437,0.921845842708516,0.434418072340414,1.37060810223918,2.74514739048685,0.206768026122887,0.431428401637234,0.106727557803444,1.21251028578504,0,0.604780586659361,0,0,1.12264037773229,1.02511319404561,0,0.321707842287215,1.48418066444991,0,0.532685175939381,0.739144404124282,0.519254429183621,0.464841513839837,1.93375119346596,0.200506470303285,0.552485933615378,0.68888668898764,0,0.524497659837696,0.451199612907412,0.462092022626489,0,0,0.527758144464379,1.13733384070897,1.53084334748864,0.647747748306418,0,0.541892875087706,1.00337954770971,0.254876273045038,2.49322802678617,0,0.219259876645935,0,0,0.656029291399411,0.325378394664303,0.412164046590889,0.457847324091717,0.082509499920588,1.72279661398852,0,1.6068392984416,1.83674364755032,1.3864375540318,0.921022048356777,0.964856007391714,0.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| |||
|short_description=p5@CTDNEP1 | |||
}} |
Revision as of 15:27, 11 September 2013
Short description: | p5@CTDNEP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_CTDNEP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 84bp_to_NM_001143775, uc002gfc.2, uc002gfd.2_5end |
EntrezGene: | CTDNEP1 |
HGNC: | 19085 |
UniProt: | O95476 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 5.72e-10 | 36 |
meso-epithelial cell | 3.04e-08 | 45 |
endothelial cell of vascular tree | 3.94e-08 | 24 |
lining cell | 4.32e-07 | 58 |
barrier cell | 4.32e-07 | 58 |
capillary endothelial cell | 6.24e-07 | 3 |
blood vessel endothelial cell | 9.01e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 9.01e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
microcirculatory vessel | 6.24e-07 | 3 |
endothelium of capillary | 6.24e-07 | 3 |
capillary | 6.24e-07 | 3 |
blood vessel endothelium | 9.01e-07 | 18 |
endothelium | 9.01e-07 | 18 |
cardiovascular system endothelium | 9.01e-07 | 18 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.