FFCP PHASE1:Hg19::chr17:42875167..42875178,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C48|description=CAGE_peak_at_chr17:42875167..42875178,-|id=chr17:42875167..42875178,-|ontology_enrichment_celltype=CL:0002594!9.65e-07!4|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0000358;1.75e-12;1!UBERON:0005754;1.75e-12;1!UBERON:0004874;1.75e-12;1!UBERON:0006242;3.64e-12;1!UBERON:0007297;7.19e-07;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=DOID:3307,9.54e-07,2|ontology_enrichment_uberon=UBERON:0007023!8.22e-31!115;UBERON:0006947!3.51e-09!3;UBERON:0004054!3.51e-09!3;UBERON:0003978!1.60e-08!3;UBERON:0009751!1.60e-08!3;UBERON:0000946!1.60e-08!3;UBERON:0002523!1.60e-08!3;UBERON:0005983!1.60e-08!3;UBERON:0002165!1.60e-08!3;UBERON:0002062!1.60e-08!3;UBERON:0007280!1.60e-08!3;UBERON:0000059!3.83e-08!11;UBERON:0001896!9.37e-08!3;UBERON:0005290!9.37e-08!3;UBERON:0010096!9.37e-08!3;UBERON:0002298!4.33e-07!8;UBERON:0001155!4.71e-07!9;UBERON:0005904!5.93e-07!4;UBERON:0001310!9.65e-07!4|ontology_enrichment_uberon_v019=UBERON:0006947;6.02e-16;3!UBERON:0004054;6.02e-16;3!UBERON:0001000;1.05e-12;1!UBERON:0005352;1.05e-12;1!UBERON:0005795;1.75e-12;1!UBERON:0000989;1.75e-12;1!UBERON:0000998;1.75e-12;1!UBERON:0008811;1.75e-12;1!UBERON:0006868;1.75e-12;1!UBERON:0005904;3.36e-12;4!UBERON:0003135;9.54e-10;11!UBERON:0000059;1.60e-09;11!UBERON:0003101;2.05e-08;22!UBERON:0000079;2.05e-08;22!UBERON:0001255;4.82e-07;2!UBERON:0001556;4.82e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0006947,7.27e-16,3;UBERON:0004054,7.27e-16,3;UBERON:0001000,9.92e-13,1;UBERON:0005352,9.92e-13,1;UBERON:0000989,1.25e-12,1;UBERON:0008811,1.25e-12,1;UBERON:0006258,1.25e-12,1;UBERON:0005876,1.25e-12,1;UBERON:0004874,1.25e-12,1;UBERON:0000998,2.46e-12,1;UBERON:0006868,2.46e-12,1;UBERON:0005904,3.86e-12,4;UBERON:0003135,9.40e-10,11;UBERON:0000059,1.65e-09,11;UBERON:0007023,1.94e-08,114;UBERON:0003101,2.03e-08,22;UBERON:0000079,2.03e-08,22;UBERON:0001255,4.83e-07,2;UBERON:0001556,4.83e-07,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.589405839739707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0.823240336780769,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,1.32845119707087,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632758849437452,0,0,0,0,0,0,0.54907405947211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.811641507850816,0.92947049429925,0,0,0.0982490410131212,0.7133421029625,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0,0,0,0,0,0,0,0,1.9924798825107,0.276283915531148,0,0,0,0,0,0,0,6.21453455512682,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,3.38581137416707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,1.06149077404007,1.22206028986725,0,0,0,0.202203398942031,0.802577647298789,0,0,0,0,3.94584402849391,2.41981432097328,0,0.063186579628488,0,0,0,0,0,0,0,0.277349346026277,0,0,0,0.698906672968121,0,0,0,0,0.872901148395775,0,0.225980740780532,0,0,0.189932387867636,0,0,1.06726497369676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.687481272035051,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236417121897595,0.0524545881349981,0,0,0,0.714695326373367,0,0,0,0,0.326587360109409,2.39460383124975,0,0,0,0,0,0,0,0,0,0,0,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0.110929051536852,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.363697318405119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345430341731199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0.381382095467167,0,0,0.451261970095544,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,2.97726707033577,0,0,0,0,0,0,0.0887023701626388,0,0.171488009437418,0.0679697329768317,0,0,0,4.00314773537622,0,0,2.73947616152849,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,2.11693525095465,0,0,0,0.111855431797792,0,0,0,0.410651227424988,0,0,0,0,0,0,0,0,0.308696632431779,0.2185595605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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C48 | |||
|description=CAGE_peak_at_chr17:42875167..42875178,- | |||
|id=chr17:42875167..42875178,- | |||
|ontology_enrichment_celltype=CL:0002594!9.65e-07!4 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0000358;1.75e-12;1!UBERON:0005754;1.75e-12;1!UBERON:0004874;1.75e-12;1!UBERON:0006242;3.64e-12;1!UBERON:0007297;7.19e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:3307,9.54e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!8.22e-31!115;UBERON:0006947!3.51e-09!3;UBERON:0004054!3.51e-09!3;UBERON:0003978!1.60e-08!3;UBERON:0009751!1.60e-08!3;UBERON:0000946!1.60e-08!3;UBERON:0002523!1.60e-08!3;UBERON:0005983!1.60e-08!3;UBERON:0002165!1.60e-08!3;UBERON:0002062!1.60e-08!3;UBERON:0007280!1.60e-08!3;UBERON:0000059!3.83e-08!11;UBERON:0001896!9.37e-08!3;UBERON:0005290!9.37e-08!3;UBERON:0010096!9.37e-08!3;UBERON:0002298!4.33e-07!8;UBERON:0001155!4.71e-07!9;UBERON:0005904!5.93e-07!4;UBERON:0001310!9.65e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;6.02e-16;3!UBERON:0004054;6.02e-16;3!UBERON:0001000;1.05e-12;1!UBERON:0005352;1.05e-12;1!UBERON:0005795;1.75e-12;1!UBERON:0000989;1.75e-12;1!UBERON:0000998;1.75e-12;1!UBERON:0008811;1.75e-12;1!UBERON:0006868;1.75e-12;1!UBERON:0005904;3.36e-12;4!UBERON:0003135;9.54e-10;11!UBERON:0000059;1.60e-09;11!UBERON:0003101;2.05e-08;22!UBERON:0000079;2.05e-08;22!UBERON:0001255;4.82e-07;2!UBERON:0001556;4.82e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,7.27e-16,3;UBERON:0004054,7.27e-16,3;UBERON:0001000,9.92e-13,1;UBERON:0005352,9.92e-13,1;UBERON:0000989,1.25e-12,1;UBERON:0008811,1.25e-12,1;UBERON:0006258,1.25e-12,1;UBERON:0005876,1.25e-12,1;UBERON:0004874,1.25e-12,1;UBERON:0000998,2.46e-12,1;UBERON:0006868,2.46e-12,1;UBERON:0005904,3.86e-12,4;UBERON:0003135,9.40e-10,11;UBERON:0000059,1.65e-09,11;UBERON:0007023,1.94e-08,114;UBERON:0003101,2.03e-08,22;UBERON:0000079,2.03e-08,22;UBERON:0001255,4.83e-07,2;UBERON:0001556,4.83e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.589405839739707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0.823240336780769,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,1.32845119707087,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632758849437452,0,0,0,0,0,0,0.54907405947211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.811641507850816,0.92947049429925,0,0,0.0982490410131212,0.7133421029625,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0,0,0,0,0,0,0,0,1.9924798825107,0.276283915531148,0,0,0,0,0,0,0,6.21453455512682,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,3.38581137416707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,1.06149077404007,1.22206028986725,0,0,0,0.202203398942031,0.802577647298789,0,0,0,0,3.94584402849391,2.41981432097328,0,0.063186579628488,0,0,0,0,0,0,0,0.277349346026277,0,0,0,0.698906672968121,0,0,0,0,0.872901148395775,0,0.225980740780532,0,0,0.189932387867636,0,0,1.06726497369676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.687481272035051,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236417121897595,0.0524545881349981,0,0,0,0.714695326373367,0,0,0,0,0.326587360109409,2.39460383124975,0,0,0,0,0,0,0,0,0,0,0,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0.110929051536852,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.363697318405119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345430341731199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0.381382095467167,0,0,0.451261970095544,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,2.97726707033577,0,0,0,0,0,0,0.0887023701626388,0,0.171488009437418,0.0679697329768317,0,0,0,4.00314773537622,0,0,2.73947616152849,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,2.11693525095465,0,0,0,0.111855431797792,0,0,0,0.410651227424988,0,0,0,0,0,0,0,0,0.308696632431779,0.218559560503957,0,9.56078454840231,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303114792872958,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0.0673520530145875,0.286888821570705,0,0,0,1.9307228228694,0,2.34640942403454,0.366724332548599,2.44137706989443,0,0.201273793591026,0 | |||
|short_description=p@chr17:42875167..42875178,- | |||
}} |
Revision as of 13:55, 11 September 2013
Short description: | p@chr17:42875167..42875178, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:42875167..42875178, - |
Coexpression cluster: | C48_smooth_bladder_esophagus_colon_penis_aorta_uterus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
male genital duct | 7.27e-16 | 3 |
internal male genitalia | 7.27e-16 | 3 |
vas deferens | 9.92e-13 | 1 |
spermatic cord | 9.92e-13 | 1 |
penis | 1.25e-12 | 1 |
intromittent organ | 1.25e-12 | 1 |
lateral plate mesenchyme | 1.25e-12 | 1 |
undifferentiated genital tubercle | 1.25e-12 | 1 |
somatopleure | 1.25e-12 | 1 |
seminal vesicle | 2.46e-12 | 1 |
seminal fluid secreting gland | 2.46e-12 | 1 |
duct of male reproductive system | 3.86e-12 | 4 |
male reproductive organ | 9.40e-10 | 11 |
large intestine | 1.65e-09 | 11 |
adult organism | 1.94e-08 | 114 |
male organism | 2.03e-08 | 22 |
male reproductive system | 2.03e-08 | 22 |
urinary bladder | 4.83e-07 | 2 |
lower urinary tract | 4.83e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
teratoma | 9.54e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.