FFCP PHASE1:Hg19::chr17:42466963..42466982,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3674|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6138|TSSclassifier=S|UniProt=P08514|association_with_transcript=-90bp_to_ENST00000262407,ENST00000353281,NM_000419,uc002igt.1_5end|coexpression_cluster_id=C64|description=CAGE_peak_3_at_ITGA2B_5end|id=chr17:42466963..42466982,-|ontology_enrichment_celltype=CL:0000763!2.67e-23!112;CL:0000049!2.67e-23!112;CL:0000037!3.54e-18!172;CL:0000566!3.54e-18!172;CL:0000988!1.37e-16!182;CL:0002032!6.59e-15!165;CL:0000837!6.59e-15!165;CL:0002274!2.08e-14!5;CL:0000457!2.08e-14!5;CL:0002191!2.08e-14!5;CL:0000097!2.08e-14!5;CL:0000831!2.08e-14!5;CL:0002028!2.08e-14!5;CL:0000767!8.09e-09!3;CL:0000842!9.79e-09!3;CL:0000163!7.97e-08!9;CL:0000764!5.54e-07!2;CL:0000765!5.54e-07!2;CL:0000050!5.54e-07!2;CL:0000038!5.54e-07!2;CL:0000558!5.54e-07!2;CL:0000547!5.54e-07!2;CL:0000549!5.54e-07!2;CL:0000550!5.54e-07!2;CL:0000552!5.54e-07!2|ontology_enrichment_celltype_v019=CL:0000764;1.98e-13;2!CL:0000558;1.98e-13;2!CL:0000763;1.36e-08;100|ontology_enrichment_celltype_v019_2=CL:0000763,3.24e-17,108;CL:0000049,3.24e-17,108;CL:0000764,2.39e-13,2;CL:0000765,2.39e-13,2;CL:0000050,2.39e-13,2;CL:0000038,2.39e-13,2;CL:0000558,2.39e-13,2;CL:0000547,2.39e-13,2;CL:0000549,2.39e-13,2;CL:0000550,2.39e-13,2;CL:0000552,2.39e-13,2;CL:0002032,1.14e-11,161;CL:0000837,1.14e-11,161;CL:0000037,5.14e-11,168;CL:0000988,2.98e-10,177|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:8692!1.03e-29!31;DOID:1240!2.73e-25!39;DOID:2531!5.43e-20!51;DOID:0060083!5.43e-20!51;DOID:1036!7.44e-09!8|ontology_enrichment_disease_v019=DOID:8692;1.15e-35;31!DOID:1240;4.23e-26;39!DOID:2531;9.93e-18;51!DOID:0060083;9.93e-18;51!DOID:9119;5.58e-08;1!DOID:8552;6.80e-08;1!DOID:1036;1.00e-07;8|ontology_enrichment_disease_v019_2=DOID:8692,1.19e-37,31;DOID:1240,6.45e-34,39;DOID:2531,3.24e-25,51;DOID:0060083,3.24e-25,51;DOID:0050686,1.49e-08,137;DOID:9119,5.58e-08,1;DOID:8552,6.80e-08,1;DOID:1036,9.91e-08,8|ontology_enrichment_uberon=UBERON:0000178!2.97e-25!15;UBERON:0000179!2.97e-25!15;UBERON:0000463!2.97e-25!15;UBERON:0002390!1.45e-11!102;UBERON:0003061!1.45e-11!102;UBERON:0002193!5.70e-10!112|ontology_enrichment_uberon_v019=UBERON:0000178;4.52e-25;15!UBERON:0000179;4.52e-25;15!UBERON:0000463;4.52e-25;15!UBERON:0002390;1.29e-10;32|ontology_enrichment_uberon_v019_2=UBERON:0000178,4.91e-25,15;UBERON:0000179,4.91e-25,15;UBERON:0000463,4.91e-25,15|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.54027849164014,0.383829398097213,0.154816123316076,0,0,0,0,0,0.880801318004542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0.434377689410233,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64342657158052,0.560508562981536,9.2184429671277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0.649094787309367,0.522389211897802,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.7945706610864,77.3065250636125,0.207328115540772,0.432359860250884,0.6312121671319,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0.862856803274467,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.06963827304308,3.13722541229881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,5.07447609232169,2.29391162142713,2.27858874869665,1.42939065274673,0.822724546172388,5.18778648954174,2.16012574895246,7.13812658664843,0,0,0,0,0,0,0,36.5230249722054,4.78763425330917,3.17510374085824,0,8.14311816529031,0,0,2.50634477090067,17.9449284469699,0,0.201799707191048,0,0,0,0,0,0,0.278406173895242,3.69262196843137,24.0705553843625,27.6449733438191,29.6072710684484,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511572370226872,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41282230755522,19.6129784642185,0,0.392125068635479,0.167821586975843,0,42.1181934298003,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.5052136337865,0,0,0,0,0,0.223171457441873,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157363764404994,0,1.07572403599707,0.191915197319445,0,0,0,0,0,0,0,18.3887246478519,0,0.113312091520126,0,1.32506888912221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39997479170986,0.106691729694141,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3674 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6138 | |||
|TSSclassifier=S | |||
|UniProt=P08514 | |||
|association_with_transcript=-90bp_to_ENST00000262407,ENST00000353281,NM_000419,uc002igt.1_5end | |||
|coexpression_cluster_id=C64 | |||
|description=CAGE_peak_3_at_ITGA2B_5end | |||
|id=chr17:42466963..42466982,- | |||
|ontology_enrichment_celltype=CL:0000763!2.67e-23!112;CL:0000049!2.67e-23!112;CL:0000037!3.54e-18!172;CL:0000566!3.54e-18!172;CL:0000988!1.37e-16!182;CL:0002032!6.59e-15!165;CL:0000837!6.59e-15!165;CL:0002274!2.08e-14!5;CL:0000457!2.08e-14!5;CL:0002191!2.08e-14!5;CL:0000097!2.08e-14!5;CL:0000831!2.08e-14!5;CL:0002028!2.08e-14!5;CL:0000767!8.09e-09!3;CL:0000842!9.79e-09!3;CL:0000163!7.97e-08!9;CL:0000764!5.54e-07!2;CL:0000765!5.54e-07!2;CL:0000050!5.54e-07!2;CL:0000038!5.54e-07!2;CL:0000558!5.54e-07!2;CL:0000547!5.54e-07!2;CL:0000549!5.54e-07!2;CL:0000550!5.54e-07!2;CL:0000552!5.54e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000764;1.98e-13;2!CL:0000558;1.98e-13;2!CL:0000763;1.36e-08;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,3.24e-17,108;CL:0000049,3.24e-17,108;CL:0000764,2.39e-13,2;CL:0000765,2.39e-13,2;CL:0000050,2.39e-13,2;CL:0000038,2.39e-13,2;CL:0000558,2.39e-13,2;CL:0000547,2.39e-13,2;CL:0000549,2.39e-13,2;CL:0000550,2.39e-13,2;CL:0000552,2.39e-13,2;CL:0002032,1.14e-11,161;CL:0000837,1.14e-11,161;CL:0000037,5.14e-11,168;CL:0000988,2.98e-10,177 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:8692!1.03e-29!31;DOID:1240!2.73e-25!39;DOID:2531!5.43e-20!51;DOID:0060083!5.43e-20!51;DOID:1036!7.44e-09!8 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.15e-35;31!DOID:1240;4.23e-26;39!DOID:2531;9.93e-18;51!DOID:0060083;9.93e-18;51!DOID:9119;5.58e-08;1!DOID:8552;6.80e-08;1!DOID:1036;1.00e-07;8 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.19e-37,31;DOID:1240,6.45e-34,39;DOID:2531,3.24e-25,51;DOID:0060083,3.24e-25,51;DOID:0050686,1.49e-08,137;DOID:9119,5.58e-08,1;DOID:8552,6.80e-08,1;DOID:1036,9.91e-08,8 | |||
|ontology_enrichment_uberon=UBERON:0000178!2.97e-25!15;UBERON:0000179!2.97e-25!15;UBERON:0000463!2.97e-25!15;UBERON:0002390!1.45e-11!102;UBERON:0003061!1.45e-11!102;UBERON:0002193!5.70e-10!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.52e-25;15!UBERON:0000179;4.52e-25;15!UBERON:0000463;4.52e-25;15!UBERON:0002390;1.29e-10;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,4.91e-25,15;UBERON:0000179,4.91e-25,15;UBERON:0000463,4.91e-25,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.54027849164014,0.383829398097213,0.154816123316076,0,0,0,0,0,0.880801318004542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0.434377689410233,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64342657158052,0.560508562981536,9.2184429671277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0.649094787309367,0.522389211897802,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.7945706610864,77.3065250636125,0.207328115540772,0.432359860250884,0.6312121671319,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0.862856803274467,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.06963827304308,3.13722541229881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,5.07447609232169,2.29391162142713,2.27858874869665,1.42939065274673,0.822724546172388,5.18778648954174,2.16012574895246,7.13812658664843,0,0,0,0,0,0,0,36.5230249722054,4.78763425330917,3.17510374085824,0,8.14311816529031,0,0,2.50634477090067,17.9449284469699,0,0.201799707191048,0,0,0,0,0,0,0.278406173895242,3.69262196843137,24.0705553843625,27.6449733438191,29.6072710684484,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511572370226872,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41282230755522,19.6129784642185,0,0.392125068635479,0.167821586975843,0,42.1181934298003,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.5052136337865,0,0,0,0,0,0.223171457441873,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157363764404994,0,1.07572403599707,0.191915197319445,0,0,0,0,0,0,0,18.3887246478519,0,0.113312091520126,0,1.32506888912221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39997479170986,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0.4226557275834,0,0.563903507879121,0.773494655682926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@ITGA2B | |||
}} |
Revision as of 13:54, 11 September 2013
Short description: | p3@ITGA2B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_ITGA2B_5end |
Coexpression cluster: | C64_Mast_chronic_acute_immature_chorionic_Basophils_Dendritic |
Association with transcript: | -90bp_to_ENST00000262407, ENST00000353281, NM_000419, uc002igt.1_5end |
EntrezGene: | ITGA2B |
HGNC: | 6138 |
UniProt: | P08514 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 3.24e-17 | 108 |
common myeloid progenitor | 3.24e-17 | 108 |
erythroid lineage cell | 2.39e-13 | 2 |
erythroblast | 2.39e-13 | 2 |
megakaryocyte-erythroid progenitor cell | 2.39e-13 | 2 |
erythroid progenitor cell | 2.39e-13 | 2 |
reticulocyte | 2.39e-13 | 2 |
proerythroblast | 2.39e-13 | 2 |
basophilic erythroblast | 2.39e-13 | 2 |
polychromatophilic erythroblast | 2.39e-13 | 2 |
orthochromatic erythroblast | 2.39e-13 | 2 |
hematopoietic oligopotent progenitor cell | 1.14e-11 | 161 |
hematopoietic multipotent progenitor cell | 1.14e-11 | 161 |
hematopoietic stem cell | 5.14e-11 | 168 |
hematopoietic cell | 2.98e-10 | 177 |
Ontology term | p-value | n |
---|---|---|
blood | 4.91e-25 | 15 |
haemolymphatic fluid | 4.91e-25 | 15 |
organism substance | 4.91e-25 | 15 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.19e-37 | 31 |
leukemia | 6.45e-34 | 39 |
hematologic cancer | 3.24e-25 | 51 |
immune system cancer | 3.24e-25 | 51 |
organ system cancer | 1.49e-08 | 137 |
acute myeloid leukemia | 5.58e-08 | 1 |
chronic myeloid leukemia | 6.80e-08 | 1 |
chronic leukemia | 9.91e-08 | 8 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.