FFCP PHASE1:Hg19::chr17:19648290..19648299,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=218|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=405|TSSclassifier=W|UniProt=|association_with_transcript=-209bp_to_ENST00000478057,uc002gwl.1_5end|coexpression_cluster_id=C19|description=CAGE_peak_8_at_ALDH3A1_5end|id=chr17:19648290..19648299,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002322;1.71e-14;5!CL:0000148;6.34e-08;10|ontology_enrichment_celltype_v019_2=CL:0002322,1.83e-14,5;CL:0000148,6.56e-08,10;CL:0000541,6.56e-08,10|ontology_enrichment_development_v019=UBERON:0003918;5.73e-08;10!UBERON:0007687;5.73e-08;10|ontology_enrichment_disease=DOID:305!9.42e-09!106;DOID:0050687!1.89e-07!143|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.125542639594803,0,0,0.0787107813136792,0,0,0.309632246632152,0.919421224478927,0.30120591877825,0,0,0,0.293600439334847,0.553995408531877,0.401088894940283,0.217010870715852,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0.188242339542605,0.272906150057846,0.449446968890169,0,0.641858054152187,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0,0.392937226493138,0,0,0,0,0,0,0,0,0.39752481473341,0,0,0,0,0,0.208994966536811,0,0.35576626268671,0,0,0,0,0,0,0.0892997282840798,0.44905874525234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0.243947412259191,0,0,0.10366105501537,1.00928340350251,0,0,0.643240938192885,0,0,0,0,0,0.241011029883482,0.110293972732394,0,0,0.269662616320329,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0.231046011313244,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422250816255987,0,0,0.251932747854276,0.20453736500431,0,0,0.0898683511473268,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0.291604613383254,0.173624994933292,0,0,0,0.221158519862449,0,0,0.21787692703798,0,0,0,0,0,0.217294743844016,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0.0884575645033392,0,0.296521128680622,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,5.56196651833622,0.207376382794494,0,0,0,0,0,0,0,0.0979923974143777,0.261177619741208,0,0.171986032471617,0,0,0,0,0,0,0,0,0,0.391102765469606,0.480952921509202,0,0,0.288180834308212,0,0.686379991447858,0.288109595976299,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0.160753148465019,0.137539436597234,0,0,0,0.0607495566580247,0,0.394028536495991,0.0524545881349981,0,0,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0.106787412567695,0,0.414239055347196,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0.1251909307065,0.573409195690071,0,0,0,0,0,0,0,0,0.579684114443301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0.176689145945881,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0.255788742607303,0,0.157265941855896,0.109209638192014,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0,0,0,0.161475645631851,0,0,0.235939446695481,0,0.346576998451015,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.131545547125698,0.118193840883968,0,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0.243835849964539,0,0,0,0.485710993059139,0,1.19370465096821,0,0.90356865631168,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0.135982980381829,0,0,0,0,0,0.126166424835079,0.109265571963696,0.253397002022874,0.101988829741982,0,0,0.250707539292375,0.0757786982182394,0,0,0.103432995861895,0.213233981900981,0,0,0,0,0.0636471582781649,0,0,0,0.202056159043763,0.0717222053926763,0,0.162806537221949,0.106727345877715,0,0,0,0,0,0,0,0|short_description=p8@ALDH3A1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=218 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=405 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=-209bp_to_ENST00000478057,uc002gwl.1_5end | |||
|coexpression_cluster_id=C19 | |||
|description=CAGE_peak_8_at_ALDH3A1_5end | |||
|id=chr17:19648290..19648299,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002322;1.71e-14;5!CL:0000148;6.34e-08;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.83e-14,5;CL:0000148,6.56e-08,10;CL:0000541,6.56e-08,10 | |||
|ontology_enrichment_development_v019=UBERON:0003918;5.73e-08;10!UBERON:0007687;5.73e-08;10 | |||
|ontology_enrichment_disease=DOID:305!9.42e-09!106;DOID:0050687!1.89e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.125542639594803,0,0,0.0787107813136792,0,0,0.309632246632152,0.919421224478927,0.30120591877825,0,0,0,0.293600439334847,0.553995408531877,0.401088894940283,0.217010870715852,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0.188242339542605,0.272906150057846,0.449446968890169,0,0.641858054152187,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0,0.392937226493138,0,0,0,0,0,0,0,0,0.39752481473341,0,0,0,0,0,0.208994966536811,0,0.35576626268671,0,0,0,0,0,0,0.0892997282840798,0.44905874525234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0.243947412259191,0,0,0.10366105501537,1.00928340350251,0,0,0.643240938192885,0,0,0,0,0,0.241011029883482,0.110293972732394,0,0,0.269662616320329,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0.231046011313244,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422250816255987,0,0,0.251932747854276,0.20453736500431,0,0,0.0898683511473268,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0.291604613383254,0.173624994933292,0,0,0,0.221158519862449,0,0,0.21787692703798,0,0,0,0,0,0.217294743844016,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0.0884575645033392,0,0.296521128680622,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,5.56196651833622,0.207376382794494,0,0,0,0,0,0,0,0.0979923974143777,0.261177619741208,0,0.171986032471617,0,0,0,0,0,0,0,0,0,0.391102765469606,0.480952921509202,0,0,0.288180834308212,0,0.686379991447858,0.288109595976299,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0.160753148465019,0.137539436597234,0,0,0,0.0607495566580247,0,0.394028536495991,0.0524545881349981,0,0,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0.106787412567695,0,0.414239055347196,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0.1251909307065,0.573409195690071,0,0,0,0,0,0,0,0,0.579684114443301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0.176689145945881,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0.255788742607303,0,0.157265941855896,0.109209638192014,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0,0,0,0.161475645631851,0,0,0.235939446695481,0,0.346576998451015,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.131545547125698,0.118193840883968,0,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0.243835849964539,0,0,0,0.485710993059139,0,1.19370465096821,0,0.90356865631168,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0.135982980381829,0,0,0,0,0,0.126166424835079,0.109265571963696,0.253397002022874,0.101988829741982,0,0,0.250707539292375,0.0757786982182394,0,0,0.103432995861895,0.213233981900981,0,0,0,0,0.0636471582781649,0,0,0,0.202056159043763,0.0717222053926763,0,0.162806537221949,0.106727345877715,0,0,0,0,0,0,0,0 | |||
|short_description=p8@ALDH3A1 | |||
}} |
Revision as of 12:33, 11 September 2013
Short description: | p8@ALDH3A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_ALDH3A1_5end |
Coexpression cluster: | C19_embryonic_testis_cord_chronic_CD14_NK_mesothelioma |
Association with transcript: | -209bp_to_ENST00000478057, uc002gwl.1_5end |
EntrezGene: | ALDH3A1 |
HGNC: | 405 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.83e-14 | 5 |
melanocyte | 6.56e-08 | 10 |
melanoblast | 6.56e-08 | 10 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.