FFCP PHASE1:Hg19::chr17:17495390..17495399,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10400|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=8830|TSSclassifier=N|UniProt=A8MZ66|association_with_transcript=-368bp_to_ENST00000395781_5end|description=CAGE_peak_14_at_PEMT_5end|id=chr17:17495390..17495399,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002521;3.89e-23;3!CL:0000039;5.69e-22;7!CL:0000586;5.69e-22;7!CL:0002581;8.72e-18;1!CL:0000317;1.44e-09;2!CL:1000448;1.44e-09;2!CL:0002308;1.44e-09;2!CL:0002140;1.44e-09;2|ontology_enrichment_celltype_v019_2=CL:0002521,2.63e-23,3;CL:0000039,5.30e-22,7;CL:0000586,5.30e-22,7;CL:0002581,6.23e-18,1;CL:0000317,1.71e-09,2;CL:1000448,1.71e-09,2;CL:0002308,1.71e-09,2;CL:0002140,1.71e-09,2|ontology_enrichment_development_v019=UBERON:0009117;1.35e-15;10!UBERON:0005564;1.35e-15;10|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3151;3.44e-18;1!DOID:3149;3.44e-18;1!DOID:3451;9.06e-10;2!DOID:4159;9.06e-10;2!DOID:0060122;9.06e-10;2!DOID:3095;2.07e-07;22!DOID:2994;2.07e-07;22|ontology_enrichment_disease_v019_2=DOID:3151,3.75e-18,1;DOID:3149,3.75e-18,1;DOID:3451,9.46e-10,2;DOID:4159,9.46e-10,2;DOID:0060122,9.46e-10,2;DOID:3095,2.02e-07,22;DOID:2994,2.02e-07,22|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0002190;3.89e-23;3!UBERON:0000473;2.56e-19;8!UBERON:0002072;2.66e-14;5!UBERON:0003135;3.08e-14;11!UBERON:0001013;2.67e-11;14!UBERON:0002419;1.44e-09;2!UBERON:0007771;1.44e-09;2!UBERON:0003297;1.44e-09;2!UBERON:0001821;1.44e-09;2!UBERON:0003487;1.44e-09;2!UBERON:0005406;1.44e-09;2!UBERON:0001820;1.44e-09;2!UBERON:0000991;9.73e-08;21!UBERON:0003101;2.07e-07;22!UBERON:0000079;2.07e-07;22|ontology_enrichment_uberon_v019_2=UBERON:0002190,2.63e-23,3;UBERON:0000473,2.41e-19,8;UBERON:0002072,2.11e-14,5;UBERON:0003135,2.95e-14,11;UBERON:0001013,2.20e-11,14;UBERON:0005406,1.22e-09,2;UBERON:0002419,1.71e-09,2;UBERON:0007771,1.71e-09,2;UBERON:0003297,1.71e-09,2;UBERON:0001821,1.71e-09,2;UBERON:0003487,1.71e-09,2;UBERON:0001820,1.71e-09,2;UBERON:0005089,1.71e-09,2;UBERON:0005088,1.71e-09,2;UBERON:0000991,9.51e-08,21;UBERON:0009196,9.51e-08,21;UBERON:0009117,9.51e-08,21;UBERON:0005564,9.51e-08,21;UBERON:0004176,2.02e-07,22;UBERON:0003101,2.02e-07,22;UBERON:0000079,2.02e-07,22|phase1_expression=0.181678379270557,0.856402095563933,0.281908808191942,0,0,0.872338524100369,2.53299878168311,0,1.82829939739887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0.154816123316076,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0.285012743741249,0,0.182664153764634,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.0654895377488563,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0,0,0,0,0.204154171254893,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0.0974370051611986,0,0,0,0,0.10075209822764,0.169560592310488,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0.168584690078102,0.241011029883482,0.441175890929576,0.217879444092406,0,0.269662616320329,0,0.38474715694639,0,0,0,0,1.26755034821831,0,0,0,0,0,0.329250856225877,0,0.201057944823262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0.600686115687835,0,0,0,0,0,0,0,0,1.04007436911366,0,0,0,0,0.542621605391443,0,0,0,0,0.301439377059586,0,0,0,0,0,0.239624855491583,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,1.48418066444991,0.154209693802656,0,0.0821271560138091,0,0.116210378459959,0,0.200506470303285,0.552485933615378,0,0,0.131124414959424,0,0.0770153371044148,0,0,0,0,0,0,0,0,0.501689773854853,0,0.831076008928724,0,0,0,0,0,0,0.103041011647722,0,0,1.14853107599234,0,0,0,0.308097234229289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0.202182481573316,0,0,0,0.243713489631284,0,0,0.141405431953713,0,0.551365343546124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0.108647371922008,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0.247127877893006,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0.867798691675654,0,0.0870592065804026,0.17472666824203,0,0.0967563312890851,0,0,0,0.264768380074501,0,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,2.0126081255956,0,0.0524545881349981,0,0,0,0,0,0.25426853765475,0,0.864221491201268,0,0,0,0,0,0.439656701034247,0,0,0,0,0.704815022316672,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10400 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8830 | |||
|TSSclassifier=N | |||
|UniProt=A8MZ66 | |||
|association_with_transcript=-368bp_to_ENST00000395781_5end | |||
|description=CAGE_peak_14_at_PEMT_5end | |||
|id=chr17:17495390..17495399,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002521;3.89e-23;3!CL:0000039;5.69e-22;7!CL:0000586;5.69e-22;7!CL:0002581;8.72e-18;1!CL:0000317;1.44e-09;2!CL:1000448;1.44e-09;2!CL:0002308;1.44e-09;2!CL:0002140;1.44e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002521,2.63e-23,3;CL:0000039,5.30e-22,7;CL:0000586,5.30e-22,7;CL:0002581,6.23e-18,1;CL:0000317,1.71e-09,2;CL:1000448,1.71e-09,2;CL:0002308,1.71e-09,2;CL:0002140,1.71e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.35e-15;10!UBERON:0005564;1.35e-15;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3151;3.44e-18;1!DOID:3149;3.44e-18;1!DOID:3451;9.06e-10;2!DOID:4159;9.06e-10;2!DOID:0060122;9.06e-10;2!DOID:3095;2.07e-07;22!DOID:2994;2.07e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,3.75e-18,1;DOID:3149,3.75e-18,1;DOID:3451,9.46e-10,2;DOID:4159,9.46e-10,2;DOID:0060122,9.46e-10,2;DOID:3095,2.02e-07,22;DOID:2994,2.02e-07,22 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002190;3.89e-23;3!UBERON:0000473;2.56e-19;8!UBERON:0002072;2.66e-14;5!UBERON:0003135;3.08e-14;11!UBERON:0001013;2.67e-11;14!UBERON:0002419;1.44e-09;2!UBERON:0007771;1.44e-09;2!UBERON:0003297;1.44e-09;2!UBERON:0001821;1.44e-09;2!UBERON:0003487;1.44e-09;2!UBERON:0005406;1.44e-09;2!UBERON:0001820;1.44e-09;2!UBERON:0000991;9.73e-08;21!UBERON:0003101;2.07e-07;22!UBERON:0000079;2.07e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002190,2.63e-23,3;UBERON:0000473,2.41e-19,8;UBERON:0002072,2.11e-14,5;UBERON:0003135,2.95e-14,11;UBERON:0001013,2.20e-11,14;UBERON:0005406,1.22e-09,2;UBERON:0002419,1.71e-09,2;UBERON:0007771,1.71e-09,2;UBERON:0003297,1.71e-09,2;UBERON:0001821,1.71e-09,2;UBERON:0003487,1.71e-09,2;UBERON:0001820,1.71e-09,2;UBERON:0005089,1.71e-09,2;UBERON:0005088,1.71e-09,2;UBERON:0000991,9.51e-08,21;UBERON:0009196,9.51e-08,21;UBERON:0009117,9.51e-08,21;UBERON:0005564,9.51e-08,21;UBERON:0004176,2.02e-07,22;UBERON:0003101,2.02e-07,22;UBERON:0000079,2.02e-07,22 | |||
|phase1_expression=0.181678379270557,0.856402095563933,0.281908808191942,0,0,0.872338524100369,2.53299878168311,0,1.82829939739887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0.154816123316076,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0.285012743741249,0,0.182664153764634,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.0654895377488563,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0,0,0,0,0.204154171254893,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0.0974370051611986,0,0,0,0,0.10075209822764,0.169560592310488,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0.168584690078102,0.241011029883482,0.441175890929576,0.217879444092406,0,0.269662616320329,0,0.38474715694639,0,0,0,0,1.26755034821831,0,0,0,0,0,0.329250856225877,0,0.201057944823262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0.600686115687835,0,0,0,0,0,0,0,0,1.04007436911366,0,0,0,0,0.542621605391443,0,0,0,0,0.301439377059586,0,0,0,0,0,0.239624855491583,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,1.48418066444991,0.154209693802656,0,0.0821271560138091,0,0.116210378459959,0,0.200506470303285,0.552485933615378,0,0,0.131124414959424,0,0.0770153371044148,0,0,0,0,0,0,0,0,0.501689773854853,0,0.831076008928724,0,0,0,0,0,0,0.103041011647722,0,0,1.14853107599234,0,0,0,0.308097234229289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0.202182481573316,0,0,0,0.243713489631284,0,0,0.141405431953713,0,0.551365343546124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0.108647371922008,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0.247127877893006,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0.867798691675654,0,0.0870592065804026,0.17472666824203,0,0.0967563312890851,0,0,0,0.264768380074501,0,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,2.0126081255956,0,0.0524545881349981,0,0,0,0,0,0.25426853765475,0,0.864221491201268,0,0,0,0,0,0.439656701034247,0,0,0,0,0.704815022316672,0,0,0,0,0,0,0,0.544017803369474,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0.554805861502613,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,1.24415452006595,0,0.323474434190045,0,0,0,0,0,0,0,0,0,0.352675943690684,0.3062454773532,0.0642292250964595,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,1.39241355481392,0,0,0,0,0.163771917510097,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0.929931402945002,0.173858272302579,0,0.414432328326074,0.3414369541879,0,0.430227358820278,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0.233939463462106,0,0,0,0,0,0.617393264863557,0.655678681511872,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546327859818478,0,3.3656313814854,1.06886962106224,1.92979289023174,0,0,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p14@PEMT | |||
}} |
Revision as of 12:27, 11 September 2013
Short description: | p14@PEMT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_14_at_PEMT_5end |
Coexpression cluster: | NA |
Association with transcript: | -368bp_to_ENST00000395781_5end |
EntrezGene: | PEMT |
HGNC: | 8830 |
UniProt: | A8MZ66 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
subcutaneous fat cell | 2.63e-23 | 3 |
germ line cell | 5.30e-22 | 7 |
germ cell | 5.30e-22 | 7 |
perirenal preadipocyte | 6.23e-18 | 1 |
sebum secreting cell | 1.71e-09 | 2 |
epithelial cell of sweat gland | 1.71e-09 | 2 |
epithelial cell of skin gland | 1.71e-09 | 2 |
acinar cell of sebaceous gland | 1.71e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
subcutaneous adipose tissue | 2.63e-23 | 3 |
testis | 2.41e-19 | 8 |
hypodermis | 2.11e-14 | 5 |
male reproductive organ | 2.95e-14 | 11 |
adipose tissue | 2.20e-11 | 14 |
perirenal fat | 1.22e-09 | 2 |
skin gland | 1.71e-09 | 2 |
epidermis gland | 1.71e-09 | 2 |
gland of integumental system | 1.71e-09 | 2 |
sebaceous gland | 1.71e-09 | 2 |
skin sebaceous gland | 1.71e-09 | 2 |
sweat gland | 1.71e-09 | 2 |
sweat gland placode | 1.71e-09 | 2 |
sebaceous gland placode | 1.71e-09 | 2 |
gonad | 9.51e-08 | 21 |
indifferent external genitalia | 9.51e-08 | 21 |
indifferent gonad | 9.51e-08 | 21 |
gonad primordium | 9.51e-08 | 21 |
external genitalia | 2.02e-07 | 22 |
male organism | 2.02e-07 | 22 |
male reproductive system | 2.02e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 3.75e-18 | 1 |
keratoacanthoma | 3.75e-18 | 1 |
skin carcinoma | 9.46e-10 | 2 |
skin cancer | 9.46e-10 | 2 |
integumentary system cancer | 9.46e-10 | 2 |
germ cell and embryonal cancer | 2.02e-07 | 22 |
germ cell cancer | 2.02e-07 | 22 |
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