FFCP PHASE1:Hg19::chr17:17480405..17480422,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10400|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=8830|TSSclassifier=S|UniProt=Q9UBM1|association_with_transcript=-79bp_to_CR457099_5end|coexpression_cluster_id=C220|description=CAGE_peak_12_at_PEMT_5end|id=chr17:17480405..17480422,-|ontology_enrichment_celltype=CL:0000136!3.79e-34!15;CL:0002521!4.67e-14!3;CL:0000325!1.13e-11!39;CL:0002617!4.87e-10!2;CL:0000650!5.98e-07!3;CL:1000618!5.98e-07!3;CL:1001318!5.98e-07!3;CL:0002173!5.98e-07!3;CL:1000500!5.98e-07!3;CL:0002615!6.52e-07!3|ontology_enrichment_celltype_v019=CL:0000136;6.44e-91;13!CL:0002521;2.24e-30;3!CL:0002617;4.70e-21;2!CL:0000650;5.20e-21;2!CL:1000500;5.20e-21;2!CL:1000618;5.20e-21;2!CL:1001318;5.20e-21;2!CL:0002173;5.20e-21;2!CL:0002615;3.27e-14;3!CL:0000669;5.44e-11;4|ontology_enrichment_celltype_v019_2=CL:0000136,2.00e-78,15;CL:0002521,3.35e-30,3;CL:0000650,5.76e-21,2;CL:1000500,5.76e-21,2;CL:1000618,5.76e-21,2;CL:1001318,5.76e-21,2;CL:0002173,5.76e-21,2;CL:0002617,5.76e-21,2;CL:0002615,3.17e-14,3;CL:0000669,5.72e-11,4|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002190!4.67e-14!3;UBERON:0006947!4.67e-14!3;UBERON:0004054!4.67e-14!3;UBERON:0005904!1.18e-10!4;UBERON:0003135!5.88e-10!11;UBERON:0002072!1.32e-08!5;UBERON:0001013!1.38e-07!14;UBERON:0004175!2.09e-07!25;UBERON:0003133!5.70e-07!48;UBERON:0003567!5.98e-07!3;UBERON:0003838!5.98e-07!3;UBERON:0005169!5.98e-07!3;UBERON:0002321!5.98e-07!3;UBERON:0005215!5.98e-07!3;UBERON:0002303!5.98e-07!3;UBERON:0002319!5.98e-07!3|ontology_enrichment_uberon_v019=UBERON:0002190;2.24e-30;3!UBERON:0003567;5.20e-21;2!UBERON:0003838;5.20e-21;2!UBERON:0003586;5.20e-21;2!UBERON:0005169;5.20e-21;2!UBERON:0002321;5.20e-21;2!UBERON:0005215;5.20e-21;2!UBERON:0002303;5.20e-21;2!UBERON:0002319;5.20e-21;2!UBERON:0002072;1.66e-18;5!UBERON:0003135;9.24e-15;11!UBERON:0006947;1.91e-14;3!UBERON:0004054;1.91e-14;3!UBERON:0001301;1.18e-11;1!UBERON:0001013;1.50e-11;14!UBERON:0001000;2.82e-11;1!UBERON:0005352;2.82e-11;1!UBERON:0005904;4.56e-11;4!UBERON:0003891;5.44e-11;4!UBERON:0000310;1.58e-09;10!UBERON:0001443;1.04e-08;11!UBERON:0003688;1.50e-07;6!UBERON:0002358;1.50e-07;6!UBERON:0003684;1.50e-07;6!UBERON:0001178;1.50e-07;6!UBERON:0003101;1.78e-07;22!UBERON:0000079;1.78e-07;22|ontology_enrichment_uberon_v019_2=UBERON:0002190,3.35e-30,3;UBERON:0003567,5.76e-21,2;UBERON:0003838,5.76e-21,2;UBERON:0003586,5.76e-21,2;UBERON:0005169,5.76e-21,2;UBERON:0002321,5.76e-21,2;UBERON:0005215,5.76e-21,2;UBERON:0002303,5.76e-21,2;UBERON:0002319,5.76e-21,2;UBERON:0002072,2.11e-18,5;UBERON:0003135,8.30e-15,11;UBERON:0006947,1.85e-14,3;UBERON:0004054,1.85e-14,3;UBERON:0005103,5.94e-12,8;UBERON:0000083,5.94e-12,8;UBERON:0009201,5.94e-12,8;UBERON:0006553,5.94e-12,8;UBERON:0003074,5.94e-12,8;UBERON:0003060,5.94e-12,8;UBERON:0001301,1.18e-11,1;UBERON:0001013,1.54e-11,14;UBERON:0001000,2.68e-11,1;UBERON:0005352,2.68e-11,1;UBERON:0005904,4.45e-11,4;UBERON:0003891,5.72e-11,4;UBERON:0000080,1.10e-10,9;UBERON:0002120,1.10e-10,9;UBERON:0004875,1.10e-10,9;UBERON:0005721,1.10e-10,9;UBERON:0005754,1.10e-10,9;UBERON:0007297,1.10e-10,9;UBERON:0000310,1.63e-09,10;UBERON:0004876,7.78e-09,11;UBERON:0001443,1.07e-08,11;UBERON:0000058,1.08e-08,19;UBERON:0003886,2.22e-08,54;UBERON:0003887,3.86e-08,12;UBERON:0003688,1.47e-07,6;UBERON:0002358,1.47e-07,6;UBERON:0003684,1.47e-07,6;UBERON:0001178,1.47e-07,6;UBERON:0003101,1.69e-07,22;UBERON:0000079,1.69e-07,22;UBERON:0002553,2.46e-07,61|phase1_expression=1.09007027562334,24.6215602474631,1.26858963686374,0,6.70441641640932,0,35.4619829435635,1.26343974685366,1.04474251279935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.916853528483988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,21.7048642156577,0.823240336780769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347534457872331,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.16757150035082,6.02027728625824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90460633053462,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,1.44999915086959,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10400 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=8830 | |||
|TSSclassifier=S | |||
|UniProt=Q9UBM1 | |||
|association_with_transcript=-79bp_to_CR457099_5end | |||
|coexpression_cluster_id=C220 | |||
|description=CAGE_peak_12_at_PEMT_5end | |||
|id=chr17:17480405..17480422,- | |||
|ontology_enrichment_celltype=CL:0000136!3.79e-34!15;CL:0002521!4.67e-14!3;CL:0000325!1.13e-11!39;CL:0002617!4.87e-10!2;CL:0000650!5.98e-07!3;CL:1000618!5.98e-07!3;CL:1001318!5.98e-07!3;CL:0002173!5.98e-07!3;CL:1000500!5.98e-07!3;CL:0002615!6.52e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000136;6.44e-91;13!CL:0002521;2.24e-30;3!CL:0002617;4.70e-21;2!CL:0000650;5.20e-21;2!CL:1000500;5.20e-21;2!CL:1000618;5.20e-21;2!CL:1001318;5.20e-21;2!CL:0002173;5.20e-21;2!CL:0002615;3.27e-14;3!CL:0000669;5.44e-11;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,2.00e-78,15;CL:0002521,3.35e-30,3;CL:0000650,5.76e-21,2;CL:1000500,5.76e-21,2;CL:1000618,5.76e-21,2;CL:1001318,5.76e-21,2;CL:0002173,5.76e-21,2;CL:0002617,5.76e-21,2;CL:0002615,3.17e-14,3;CL:0000669,5.72e-11,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002190!4.67e-14!3;UBERON:0006947!4.67e-14!3;UBERON:0004054!4.67e-14!3;UBERON:0005904!1.18e-10!4;UBERON:0003135!5.88e-10!11;UBERON:0002072!1.32e-08!5;UBERON:0001013!1.38e-07!14;UBERON:0004175!2.09e-07!25;UBERON:0003133!5.70e-07!48;UBERON:0003567!5.98e-07!3;UBERON:0003838!5.98e-07!3;UBERON:0005169!5.98e-07!3;UBERON:0002321!5.98e-07!3;UBERON:0005215!5.98e-07!3;UBERON:0002303!5.98e-07!3;UBERON:0002319!5.98e-07!3 | |||
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|short_description=p12@PEMT | |||
}} |
Revision as of 12:26, 11 September 2013
Short description: | p12@PEMT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_PEMT_5end |
Coexpression cluster: | C220_Adipocyte_mature_left_breast_skin_liver_adipose |
Association with transcript: | -79bp_to_CR457099_5end |
EntrezGene: | PEMT |
HGNC: | 8830 |
UniProt: | Q9UBM1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 2.00e-78 | 15 |
subcutaneous fat cell | 3.35e-30 | 3 |
mesangial cell | 5.76e-21 | 2 |
kidney interstitial cell | 5.76e-21 | 2 |
juxtaglomerular complex cell | 5.76e-21 | 2 |
renal interstitial pericyte | 5.76e-21 | 2 |
extraglomerular mesangial cell | 5.76e-21 | 2 |
adipocyte of breast | 5.76e-21 | 2 |
adipocyte of omentum tissue | 3.17e-14 | 3 |
pericyte cell | 5.72e-11 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.