FFCP PHASE1:Hg19::chr16:692875..692886,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10232|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding|HGNC=7371|TSSclassifier=W|UniProt=|association_with_transcript=-375bp_to_ENST00000445361,ENST00000446427_5end|coexpression_cluster_id=C0|description=CAGE_peak_12_at_MSLN_5end|id=chr16:692875..692886,+|ontology_enrichment_celltype=CL:0000766!1.14e-96!76;CL:0000839!4.57e-90!70;CL:0000557!1.31e-88!71;CL:0002194!1.96e-81!63;CL:0000576!1.96e-81!63;CL:0000040!1.96e-81!63;CL:0000559!1.96e-81!63;CL:0002057!2.47e-80!42;CL:0002009!1.52e-78!65;CL:0000860!3.31e-74!45;CL:0000763!1.04e-65!112;CL:0000049!1.04e-65!112;CL:0000738!2.79e-53!140;CL:0002031!1.61e-48!124;CL:0002087!2.54e-44!119;CL:0000037!9.96e-44!172;CL:0000566!9.96e-44!172;CL:0002032!7.91e-43!165;CL:0000837!7.91e-43!165;CL:0000988!1.91e-40!182;CL:0002393!1.39e-16!9;CL:0002397!1.39e-16!9;CL:0000134!1.82e-13!358;CL:0002274!3.63e-13!5;CL:0000457!3.63e-13!5;CL:0002191!3.63e-13!5;CL:0000097!3.63e-13!5;CL:0000831!3.63e-13!5;CL:0002028!3.63e-13!5;CL:0002320!6.58e-13!365;CL:0000219!3.39e-12!390;CL:0000034!3.60e-10!444;CL:0000048!8.60e-10!430;CL:0000723!1.92e-09!436;CL:0000235!9.58e-09!10;CL:0000875!1.00e-07!3;CL:0002396!1.00e-07!3;CL:0000163!4.16e-07!9|ontology_enrichment_celltype_v019=CL:0000473;9.14e-64;39!CL:0000234;9.14e-64;39!CL:0000860;3.66e-61;33!CL:0002057;3.66e-61;33!CL:0000766;3.13e-38;69!CL:0000576;3.52e-35;48!CL:0000235;3.41e-17;6!CL:0000763;2.51e-16;100!CL:0000097;4.29e-12;5!CL:0000738;8.20e-11;136!CL:0002087;9.09e-11;104!CL:0002393;5.17e-10;6!CL:0002397;5.17e-10;6!CL:0000163;6.28e-07;9|ontology_enrichment_celltype_v019_2=CL:0000473,3.04e-86,48;CL:0000234,3.04e-86,48;CL:0000766,3.05e-80,72;CL:0000839,4.17e-76,66;CL:0000557,6.45e-75,67;CL:0000860,1.16e-70,42;CL:0002057,1.16e-70,42;CL:0002194,4.48e-68,59;CL:0000576,4.48e-68,59;CL:0000040,4.48e-68,59;CL:0000559,4.48e-68,59;CL:0002009,9.92e-66,61;CL:0000763,3.88e-52,108;CL:0000049,3.88e-52,108;CL:0000738,1.79e-40,136;CL:0002031,5.66e-40,120;CL:0002032,1.86e-33,161;CL:0000837,1.86e-33,161;CL:0002087,6.15e-33,115;CL:0000037,7.30e-32,168;CL:0000988,5.36e-30,177;CL:0000235,6.17e-17,6;CL:0000134,1.89e-12,354;CL:0000097,3.69e-12,5;CL:0002028,3.69e-12,5;CL:0002320,4.17e-12,361;CL:0000219,6.81e-11,386;CL:0000048,2.09e-09,427;CL:0000723,3.35e-09,433;CL:0000034,6.18e-09,441;CL:0000163,5.78e-07,9;CL:0002393,6.97e-07,9;CL:0002397,6.97e-07,9|ontology_enrichment_development_v019=CL:0002057;3.78e-51;42!CL:0000049;2.03e-14;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!4.17e-77!80;UBERON:0001474!9.21e-71!86;UBERON:0002390!2.44e-62!102;UBERON:0003061!2.44e-62!102;UBERON:0004765!3.57e-58!101;UBERON:0001434!3.57e-58!101;UBERON:0002193!9.84e-58!112;UBERON:0002405!1.44e-53!115;UBERON:0002204!5.18e-31!167;UBERON:0003081!6.14e-24!216;UBERON:0002384!1.54e-13!375;UBERON:0000926!5.47e-07!448;UBERON:0004120!5.47e-07!448;UBERON:0006603!5.47e-07!448|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.34e-65,76;UBERON:0001474,1.65e-60,82;UBERON:0004765,9.16e-55,90;UBERON:0002405,7.32e-53,93;UBERON:0002390,6.03e-50,98;UBERON:0003061,6.03e-50,98;UBERON:0001434,7.34e-49,100;UBERON:0002193,6.47e-45,108;UBERON:0002204,2.13e-27,167;UBERON:0003081,1.14e-21,203;UBERON:0000926,3.76e-12,315;UBERON:0004120,3.76e-12,315;UBERON:0006603,3.76e-12,315;UBERON:0002384,1.23e-11,371|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0.767658796194425,0.619264493264304,0,0,0,0,0,0,1.66198622559563,1.20326668482085,1.95309783644267,0,0,0.257575567634187,0.872389432677388,1.51150377475524,0.485168122375632,2.78914844286822,2.46700732813095,1.85823822537062,0.28769239232215,0.512321413058201,0.709446689665756,3.10271112662957,2.5819387343353,1.35426486594342,0.941211697713023,1.63743690034707,1.12361742222542,1.22433556948361,3.53021929783703,1.91801137739712,0,0.199463657621632,0,8.70627715885752,7.94339314567596,3.11411124497787,0,2.08593167368081,0.868755378820466,3.02699751316684,8.10210799172642,5.06339819905415,0,0.425208599930087,0.209658645508376,0.22465726229299,0.150176892841506,0.16072558669708,0.285012743741249,0.19891667719909,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0.324547393654683,0.174129737299267,0.797747763113191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9534125230819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0.246217006087397,1.17002132569619,1.33768046059855,0,0,0,0,0,0,0.985326475791887,2.11316241631742,1.65862492432618,0.288239906833923,1.64115163454294,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0.5022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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10232 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=7371 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=-375bp_to_ENST00000445361,ENST00000446427_5end | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_12_at_MSLN_5end | |||
|id=chr16:692875..692886,+ | |||
|ontology_enrichment_celltype=CL:0000766!1.14e-96!76;CL:0000839!4.57e-90!70;CL:0000557!1.31e-88!71;CL:0002194!1.96e-81!63;CL:0000576!1.96e-81!63;CL:0000040!1.96e-81!63;CL:0000559!1.96e-81!63;CL:0002057!2.47e-80!42;CL:0002009!1.52e-78!65;CL:0000860!3.31e-74!45;CL:0000763!1.04e-65!112;CL:0000049!1.04e-65!112;CL:0000738!2.79e-53!140;CL:0002031!1.61e-48!124;CL:0002087!2.54e-44!119;CL:0000037!9.96e-44!172;CL:0000566!9.96e-44!172;CL:0002032!7.91e-43!165;CL:0000837!7.91e-43!165;CL:0000988!1.91e-40!182;CL:0002393!1.39e-16!9;CL:0002397!1.39e-16!9;CL:0000134!1.82e-13!358;CL:0002274!3.63e-13!5;CL:0000457!3.63e-13!5;CL:0002191!3.63e-13!5;CL:0000097!3.63e-13!5;CL:0000831!3.63e-13!5;CL:0002028!3.63e-13!5;CL:0002320!6.58e-13!365;CL:0000219!3.39e-12!390;CL:0000034!3.60e-10!444;CL:0000048!8.60e-10!430;CL:0000723!1.92e-09!436;CL:0000235!9.58e-09!10;CL:0000875!1.00e-07!3;CL:0002396!1.00e-07!3;CL:0000163!4.16e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000473;9.14e-64;39!CL:0000234;9.14e-64;39!CL:0000860;3.66e-61;33!CL:0002057;3.66e-61;33!CL:0000766;3.13e-38;69!CL:0000576;3.52e-35;48!CL:0000235;3.41e-17;6!CL:0000763;2.51e-16;100!CL:0000097;4.29e-12;5!CL:0000738;8.20e-11;136!CL:0002087;9.09e-11;104!CL:0002393;5.17e-10;6!CL:0002397;5.17e-10;6!CL:0000163;6.28e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,3.04e-86,48;CL:0000234,3.04e-86,48;CL:0000766,3.05e-80,72;CL:0000839,4.17e-76,66;CL:0000557,6.45e-75,67;CL:0000860,1.16e-70,42;CL:0002057,1.16e-70,42;CL:0002194,4.48e-68,59;CL:0000576,4.48e-68,59;CL:0000040,4.48e-68,59;CL:0000559,4.48e-68,59;CL:0002009,9.92e-66,61;CL:0000763,3.88e-52,108;CL:0000049,3.88e-52,108;CL:0000738,1.79e-40,136;CL:0002031,5.66e-40,120;CL:0002032,1.86e-33,161;CL:0000837,1.86e-33,161;CL:0002087,6.15e-33,115;CL:0000037,7.30e-32,168;CL:0000988,5.36e-30,177;CL:0000235,6.17e-17,6;CL:0000134,1.89e-12,354;CL:0000097,3.69e-12,5;CL:0002028,3.69e-12,5;CL:0002320,4.17e-12,361;CL:0000219,6.81e-11,386;CL:0000048,2.09e-09,427;CL:0000723,3.35e-09,433;CL:0000034,6.18e-09,441;CL:0000163,5.78e-07,9;CL:0002393,6.97e-07,9;CL:0002397,6.97e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;3.78e-51;42!CL:0000049;2.03e-14;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.17e-77!80;UBERON:0001474!9.21e-71!86;UBERON:0002390!2.44e-62!102;UBERON:0003061!2.44e-62!102;UBERON:0004765!3.57e-58!101;UBERON:0001434!3.57e-58!101;UBERON:0002193!9.84e-58!112;UBERON:0002405!1.44e-53!115;UBERON:0002204!5.18e-31!167;UBERON:0003081!6.14e-24!216;UBERON:0002384!1.54e-13!375;UBERON:0000926!5.47e-07!448;UBERON:0004120!5.47e-07!448;UBERON:0006603!5.47e-07!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.34e-65,76;UBERON:0001474,1.65e-60,82;UBERON:0004765,9.16e-55,90;UBERON:0002405,7.32e-53,93;UBERON:0002390,6.03e-50,98;UBERON:0003061,6.03e-50,98;UBERON:0001434,7.34e-49,100;UBERON:0002193,6.47e-45,108;UBERON:0002204,2.13e-27,167;UBERON:0003081,1.14e-21,203;UBERON:0000926,3.76e-12,315;UBERON:0004120,3.76e-12,315;UBERON:0006603,3.76e-12,315;UBERON:0002384,1.23e-11,371 | |||
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|short_description=p12@MSLN | |||
}} |
Revision as of 11:19, 11 September 2013
Short description: | p12@MSLN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_MSLN_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -375bp_to_ENST00000445361, ENST00000446427_5end |
EntrezGene: | MSLN |
HGNC: | 7371 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.34e-65 | 76 |
bone element | 1.65e-60 | 82 |
skeletal element | 9.16e-55 | 90 |
immune system | 7.32e-53 | 93 |
hematopoietic system | 6.03e-50 | 98 |
blood island | 6.03e-50 | 98 |
skeletal system | 7.34e-49 | 100 |
hemolymphoid system | 6.47e-45 | 108 |
musculoskeletal system | 2.13e-27 | 167 |
lateral plate mesoderm | 1.14e-21 | 203 |
mesoderm | 3.76e-12 | 315 |
mesoderm-derived structure | 3.76e-12 | 315 |
presumptive mesoderm | 3.76e-12 | 315 |
connective tissue | 1.23e-11 | 371 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.