FFCP PHASE1:Hg19::chr15:93444177..93444209,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=1106|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=1917|TSSclassifier=W|UniProt=|association_with_transcript=-257bp_to_JF432271_5end|coexpression_cluster_id=C0|description=CAGE_peak_8_at_CHD2_5end|id=chr15:93444177..93444209,+|ontology_enrichment_celltype=CL:0002057!1.50e-29!42;CL:0000860!2.38e-29!45;CL:0000738!1.08e-27!140;CL:0000766!4.34e-27!76;CL:0000557!3.04e-22!71;CL:0002031!4.41e-22!124;CL:0000839!5.54e-22!70;CL:0002009!1.33e-21!65;CL:0002194!2.37e-20!63;CL:0000576!2.37e-20!63;CL:0000040!2.37e-20!63;CL:0000559!2.37e-20!63;CL:0002087!3.44e-20!119;CL:0000037!4.96e-17!172;CL:0000566!4.96e-17!172;CL:0000988!1.14e-16!182;CL:0002032!1.54e-16!165;CL:0000837!1.54e-16!165;CL:0000763!4.18e-15!112;CL:0000049!4.18e-15!112;CL:0000134!4.55e-10!358;CL:0002320!3.08e-09!365;CL:0000094!2.72e-07!8;CL:0000081!7.62e-07!11;CL:0000219!9.09e-07!390|ontology_enrichment_celltype_v019=CL:0000860;1.00e-62;33!CL:0002057;1.00e-62;33!CL:0000473;1.05e-42;39!CL:0000234;1.05e-42;39!CL:0000576;4.41e-31;48!CL:0000766;6.90e-22;69!CL:0000094;3.34e-16;8!CL:0000081;7.61e-15;11!CL:0000763;6.99e-11;100!CL:0002087;5.23e-10;104!CL:0000775;2.31e-09;3!CL:0000738;9.79e-09;136!CL:0000624;5.76e-07;6!CL:0000771;6.29e-07;2|ontology_enrichment_celltype_v019_2=CL:0000860,4.12e-60,42;CL:0002057,4.12e-60,42;CL:0000766,2.60e-53,72;CL:0000473,2.19e-51,48;CL:0000234,2.19e-51,48;CL:0000557,5.19e-43,67;CL:0002009,7.97e-43,61;CL:0002194,3.43e-39,59;CL:0000576,3.43e-39,59;CL:0000040,3.43e-39,59;CL:0000559,3.43e-39,59;CL:0000839,1.02e-38,66;CL:0000738,6.29e-37,136;CL:0000763,1.66e-35,108;CL:0000049,1.66e-35,108;CL:0002031,1.77e-28,120;CL:0002032,8.46e-28,161;CL:0000837,8.46e-28,161;CL:0000037,2.16e-27,168;CL:0000988,1.06e-26,177;CL:0002087,2.32e-25,115;CL:0000134,2.36e-16,354;CL:0000094,2.78e-16,8;CL:0002320,9.80e-16,361;CL:0000081,6.13e-15,11;CL:0000219,1.46e-13,386;CL:0000048,1.48e-11,427;CL:0000034,2.31e-11,441;CL:0000723,3.50e-11,433;CL:0000775,2.23e-09,3;CL:0000624,4.45e-07,6;CL:0000771,6.31e-07,2|ontology_enrichment_development_v019=CL:0002057;1.37e-43;42!CL:0000049;9.64e-10;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!8.98e-20!102;UBERON:0003061!8.98e-20!102;UBERON:0002371!1.39e-18!80;UBERON:0001474!8.08e-18!86;UBERON:0002193!2.80e-16!112;UBERON:0004765!3.89e-14!101;UBERON:0001434!3.89e-14!101;UBERON:0002405!1.72e-10!115;UBERON:0002384!1.42e-08!375|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,9.35e-37,76;UBERON:0001474,1.57e-35,82;UBERON:0002390,1.79e-31,98;UBERON:0003061,1.79e-31,98;UBERON:0004765,1.79e-31,90;UBERON:0002405,3.11e-28,93;UBERON:0002193,1.40e-27,108;UBERON:0001434,2.59e-27,100;UBERON:0002384,6.81e-15,371;UBERON:0002204,2.72e-13,167;UBERON:0003081,2.50e-12,203;UBERON:0000926,8.90e-07,315;UBERON:0004120,8.90e-07,315;UBERON:0006603,8.90e-07,315|phase1_expression=0.908391896352783,0,1.55049844505568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0,0.204000691244253,0,0,0,0,0.0764134057479513,0,0,0.786728553697808,1.53531759238885,1.54816123316076,0,0,0,0,0,0,5.53995408531877,2.80762226458198,0.868043482863407,0.223915474239924,0.32389366601898,0,1.30858414901608,1.88937971844405,3.15359279544161,8.59987436551033,5.75635043230556,12.078548464909,6.61692502340946,6.40401766322752,13.9524515634265,17.5820297175675,14.846147722428,6.77132432971709,1.69418105588344,2.72906150057846,8.53949240891322,22.6502080354468,35.3021929783703,22.3767994029664,1.31940520074686,1.59570926097305,2.13112375266347,32.5034347264014,26.0997203357924,29.8954679517876,3.26623264833766,4.17186334736161,5.86409880703815,20.5835830895345,56.3464783060974,59.4949288388863,0.422510572623884,0.850417199860174,0.419317291016752,0.561643155732475,0.750884464207532,0.48217676009124,0.285012743741249,0.39783335439818,0.91332076882317,0,0,0.889509253863555,0.853460445133014,0.400395987036012,0,0.661044872784862,0,0.569212969109448,0,0.764546456250458,0,1.68152568894461,0.263384084775077,1.37696839079683,0.786021525498329,1.85041349099558,0.501559486172034,2.60737813306872,0.946895611469467,0,0.445641827540694,2.3568472597987,1.77227115666897,1.62482318259009,0,0.260118695119756,0.164437904603676,0.276350017785848,0,0.889719378972363,1.33770414044857,0,0,0.766440987203842,0,0.759059076058509,0.318565414324097,0,0.950452044448374,0.150575119077773,0,0,0,0,0.604820229674197,1.06976078313403,0.868946423296794,0,0,0,0,0,0.144846518960824,0,0,0,0.221729397462564,0,0.130979075497713,0,0,0.324547393654683,0,0,0.238490624305342,0,0.371457501329565,0.198762407366705,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0.367663080345869,0,0.0892997282840798,0,0,0,0,0,21.0848667897701,19.3890132074163,0,0,0.506522046658319,2.1185468930115,0.860509862246441,0,0.560677600142307,0,0.24666754841716,0,0.134710672069688,0,0,0,0,0,0,0,0.23486899728753,0,0.140450806702248,0,0,0,0,0,0,0,0,0.250237039743928,0.277064115484183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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=1106 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=1917 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=-257bp_to_JF432271_5end | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_8_at_CHD2_5end | |||
|id=chr15:93444177..93444209,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.50e-29!42;CL:0000860!2.38e-29!45;CL:0000738!1.08e-27!140;CL:0000766!4.34e-27!76;CL:0000557!3.04e-22!71;CL:0002031!4.41e-22!124;CL:0000839!5.54e-22!70;CL:0002009!1.33e-21!65;CL:0002194!2.37e-20!63;CL:0000576!2.37e-20!63;CL:0000040!2.37e-20!63;CL:0000559!2.37e-20!63;CL:0002087!3.44e-20!119;CL:0000037!4.96e-17!172;CL:0000566!4.96e-17!172;CL:0000988!1.14e-16!182;CL:0002032!1.54e-16!165;CL:0000837!1.54e-16!165;CL:0000763!4.18e-15!112;CL:0000049!4.18e-15!112;CL:0000134!4.55e-10!358;CL:0002320!3.08e-09!365;CL:0000094!2.72e-07!8;CL:0000081!7.62e-07!11;CL:0000219!9.09e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.00e-62;33!CL:0002057;1.00e-62;33!CL:0000473;1.05e-42;39!CL:0000234;1.05e-42;39!CL:0000576;4.41e-31;48!CL:0000766;6.90e-22;69!CL:0000094;3.34e-16;8!CL:0000081;7.61e-15;11!CL:0000763;6.99e-11;100!CL:0002087;5.23e-10;104!CL:0000775;2.31e-09;3!CL:0000738;9.79e-09;136!CL:0000624;5.76e-07;6!CL:0000771;6.29e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.12e-60,42;CL:0002057,4.12e-60,42;CL:0000766,2.60e-53,72;CL:0000473,2.19e-51,48;CL:0000234,2.19e-51,48;CL:0000557,5.19e-43,67;CL:0002009,7.97e-43,61;CL:0002194,3.43e-39,59;CL:0000576,3.43e-39,59;CL:0000040,3.43e-39,59;CL:0000559,3.43e-39,59;CL:0000839,1.02e-38,66;CL:0000738,6.29e-37,136;CL:0000763,1.66e-35,108;CL:0000049,1.66e-35,108;CL:0002031,1.77e-28,120;CL:0002032,8.46e-28,161;CL:0000837,8.46e-28,161;CL:0000037,2.16e-27,168;CL:0000988,1.06e-26,177;CL:0002087,2.32e-25,115;CL:0000134,2.36e-16,354;CL:0000094,2.78e-16,8;CL:0002320,9.80e-16,361;CL:0000081,6.13e-15,11;CL:0000219,1.46e-13,386;CL:0000048,1.48e-11,427;CL:0000034,2.31e-11,441;CL:0000723,3.50e-11,433;CL:0000775,2.23e-09,3;CL:0000624,4.45e-07,6;CL:0000771,6.31e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002057;1.37e-43;42!CL:0000049;9.64e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!8.98e-20!102;UBERON:0003061!8.98e-20!102;UBERON:0002371!1.39e-18!80;UBERON:0001474!8.08e-18!86;UBERON:0002193!2.80e-16!112;UBERON:0004765!3.89e-14!101;UBERON:0001434!3.89e-14!101;UBERON:0002405!1.72e-10!115;UBERON:0002384!1.42e-08!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,9.35e-37,76;UBERON:0001474,1.57e-35,82;UBERON:0002390,1.79e-31,98;UBERON:0003061,1.79e-31,98;UBERON:0004765,1.79e-31,90;UBERON:0002405,3.11e-28,93;UBERON:0002193,1.40e-27,108;UBERON:0001434,2.59e-27,100;UBERON:0002384,6.81e-15,371;UBERON:0002204,2.72e-13,167;UBERON:0003081,2.50e-12,203;UBERON:0000926,8.90e-07,315;UBERON:0004120,8.90e-07,315;UBERON:0006603,8.90e-07,315 | |||
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| |||
|short_description=p8@CHD2 | |||
}} |
Revision as of 09:00, 11 September 2013
Short description: | p8@CHD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_CHD2_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -257bp_to_JF432271_5end |
EntrezGene: | CHD2 |
HGNC: | 1917 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 9.35e-37 | 76 |
bone element | 1.57e-35 | 82 |
hematopoietic system | 1.79e-31 | 98 |
blood island | 1.79e-31 | 98 |
skeletal element | 1.79e-31 | 90 |
immune system | 3.11e-28 | 93 |
hemolymphoid system | 1.40e-27 | 108 |
skeletal system | 2.59e-27 | 100 |
connective tissue | 6.81e-15 | 371 |
musculoskeletal system | 2.72e-13 | 167 |
lateral plate mesoderm | 2.50e-12 | 203 |
mesoderm | 8.90e-07 | 315 |
mesoderm-derived structure | 8.90e-07 | 315 |
presumptive mesoderm | 8.90e-07 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.