FFCP PHASE1:Hg19::chr15:80800274..80800278,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr15:80800274..80800278,-|id=chr15:80800274..80800278,-|ontology_enrichment_celltype=CL:0000057!6.07e-20!75;CL:0000055!8.88e-19!180;CL:0002620!2.91e-12!23;CL:0002556!9.99e-09!6;CL:0000346!2.59e-08!3;CL:1000428!2.59e-08!3;CL:0002504!3.26e-08!3;CL:1000279!3.26e-08!3;CL:1000280!3.26e-08!3;CL:0000048!7.19e-08!430;CL:0000680!7.76e-08!57;CL:0000056!7.76e-08!57;CL:0000355!7.76e-08!57;CL:0000723!1.54e-07!436;CL:0000187!1.68e-07!54;CL:0000034!4.11e-07!444|ontology_enrichment_celltype_v019=CL:0000346;1.01e-37;3!CL:1000428;1.01e-37;3!CL:0002559;6.10e-23;5!CL:0002504;2.29e-17;3!CL:1000279;2.29e-17;3!CL:1000280;2.29e-17;3!CL:0002599;4.83e-14;1!CL:0002262;1.81e-07;2!CL:0002554;1.81e-07;2!CL:1000398;1.81e-07;2!CL:0002598;1.81e-07;2|ontology_enrichment_celltype_v019_2=CL:0000346,8.41e-38,3;CL:1000428,8.41e-38,3;CL:0002559,5.46e-23,5;CL:0002504,1.51e-17,3;CL:1000279,1.51e-17,3;CL:1000280,1.51e-17,3;CL:0002599,4.53e-14,1;CL:0002554,1.45e-07,2;CL:0002262,1.87e-07,2;CL:1000398,1.87e-07,2;CL:0002598,2.12e-07,2|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:17!7.49e-07!5;DOID:450!7.49e-07!5;DOID:66!7.49e-07!5;DOID:423!7.49e-07!5;DOID:0080000!7.49e-07!5;DOID:11722!7.49e-07!5|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000914!7.31e-13!83;UBERON:0002329!7.31e-13!83;UBERON:0003077!7.31e-13!83;UBERON:0003059!7.31e-13!83;UBERON:0007282!7.31e-13!83;UBERON:0009618!7.31e-13!83;UBERON:0007285!7.31e-13!83;UBERON:0004290!2.14e-10!70;UBERON:0002097!9.53e-10!40;UBERON:0001758!9.99e-09!6;UBERON:0003672!9.99e-09!6;UBERON:0000412!2.59e-08!3;UBERON:0001992!2.59e-08!3;UBERON:0002199!3.12e-08!45;UBERON:0002416!3.12e-08!45;UBERON:0000486!5.02e-08!82;UBERON:0003102!5.71e-08!95;UBERON:0005256!1.05e-07!143;UBERON:0001134!4.83e-07!61;UBERON:0002036!4.83e-07!61;UBERON:0003082!4.83e-07!61|ontology_enrichment_uberon_v019=UBERON:0000412;1.01e-37;3!UBERON:0001992;1.01e-37;3!UBERON:0002073;6.10e-23;5!UBERON:0002067;4.89e-13;9!UBERON:0001003;4.82e-08;15!UBERON:0007376;4.82e-08;15!UBERON:0001281;1.81e-07;2!UBERON:0003497;1.81e-07;2!UBERON:0003909;1.81e-07;2!UBERON:0003835;1.81e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0000412,8.41e-38,3;UBERON:0001992,8.41e-38,3;UBERON:0002073,5.46e-23,5;UBERON:0005086,5.46e-23,5;UBERON:0002067,4.60e-13,9;UBERON:0004016,4.60e-13,9;UBERON:0010083,4.60e-13,9;UBERON:0001003,4.65e-08,15;UBERON:0007376,4.65e-08,15;UBERON:0007383,4.65e-08,15;UBERON:0002329,5.31e-08,71;UBERON:0003059,5.31e-08,71;UBERON:0007282,5.31e-08,71;UBERON:0004290,5.31e-08,71;UBERON:0009618,5.31e-08,71;UBERON:0003077,7.00e-08,72;UBERON:0007285,7.00e-08,72;UBERON:0007524,9.16e-08,73;UBERON:0001281,1.87e-07,2;UBERON:0003497,1.87e-07,2;UBERON:0003909,1.87e-07,2;UBERON:0003835,1.87e-07,2;UBERON:0007503,3.16e-07,78;UBERON:0000486,9.41e-07,83|phase1_expression=0.181678379270557,0,0.422863212287913,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0.672325146451775,0,0,0,0.492484232307152,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1185468930115,0.286836620748814,0,1.12135520028461,0,0,0.622422070799533,0,0,0.151357427644931,0,0,0,0,0,0.117434498643765,0.161872944368132,0,0.204154171254893,0.122834317311768,0,0,0,1.82032272387605,0.718618141816238,0.168336113954066,0.125118519871964,1.10825646193673,0,0.612975591598039,0.300476117813194,0,0.179389635688862,0,0.423863802319124,0.300091096084402,0.206105058476878,0,0,0.168776332241266,0.292311015483596,0,0.460249493211497,0.161646056818812,0.710019185033229,0.302256294682921,0.847802961552438,0,0,0,0,0,0,0,0,0,1.56449532329816,1.28648187638577,2.76269842704961,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0.8231480226628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.897048674762886,0.87192013766656,0,0,3.57656445851882,0,0.797814349754612,2.08014873822732,0,0,0,0,0,0.823240336780769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0.535286966391485,0.315404830067869,0.234282829985426,0,0,0,0,0,0.434418072340414,0,0,0,0,0,0,1.66435439510497,0,0,0.153461973288062,0,0.384417447767103,0,0.321707842287215,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0.107420244868274,0,0.170453254832202,0.178064071293475,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0.744316738719335,0,0.953150969619124,1.27948895655667,0,0,0,1.43897966066652,1.92175920815238,0.942499218765491,0,0,0,2.43816869544795,0,0,0.272999822815972,0.28281086390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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr15:80800274..80800278,- | |||
|id=chr15:80800274..80800278,- | |||
|ontology_enrichment_celltype=CL:0000057!6.07e-20!75;CL:0000055!8.88e-19!180;CL:0002620!2.91e-12!23;CL:0002556!9.99e-09!6;CL:0000346!2.59e-08!3;CL:1000428!2.59e-08!3;CL:0002504!3.26e-08!3;CL:1000279!3.26e-08!3;CL:1000280!3.26e-08!3;CL:0000048!7.19e-08!430;CL:0000680!7.76e-08!57;CL:0000056!7.76e-08!57;CL:0000355!7.76e-08!57;CL:0000723!1.54e-07!436;CL:0000187!1.68e-07!54;CL:0000034!4.11e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0000346;1.01e-37;3!CL:1000428;1.01e-37;3!CL:0002559;6.10e-23;5!CL:0002504;2.29e-17;3!CL:1000279;2.29e-17;3!CL:1000280;2.29e-17;3!CL:0002599;4.83e-14;1!CL:0002262;1.81e-07;2!CL:0002554;1.81e-07;2!CL:1000398;1.81e-07;2!CL:0002598;1.81e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000346,8.41e-38,3;CL:1000428,8.41e-38,3;CL:0002559,5.46e-23,5;CL:0002504,1.51e-17,3;CL:1000279,1.51e-17,3;CL:1000280,1.51e-17,3;CL:0002599,4.53e-14,1;CL:0002554,1.45e-07,2;CL:0002262,1.87e-07,2;CL:1000398,1.87e-07,2;CL:0002598,2.12e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!7.49e-07!5;DOID:450!7.49e-07!5;DOID:66!7.49e-07!5;DOID:423!7.49e-07!5;DOID:0080000!7.49e-07!5;DOID:11722!7.49e-07!5 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!7.31e-13!83;UBERON:0002329!7.31e-13!83;UBERON:0003077!7.31e-13!83;UBERON:0003059!7.31e-13!83;UBERON:0007282!7.31e-13!83;UBERON:0009618!7.31e-13!83;UBERON:0007285!7.31e-13!83;UBERON:0004290!2.14e-10!70;UBERON:0002097!9.53e-10!40;UBERON:0001758!9.99e-09!6;UBERON:0003672!9.99e-09!6;UBERON:0000412!2.59e-08!3;UBERON:0001992!2.59e-08!3;UBERON:0002199!3.12e-08!45;UBERON:0002416!3.12e-08!45;UBERON:0000486!5.02e-08!82;UBERON:0003102!5.71e-08!95;UBERON:0005256!1.05e-07!143;UBERON:0001134!4.83e-07!61;UBERON:0002036!4.83e-07!61;UBERON:0003082!4.83e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0000412;1.01e-37;3!UBERON:0001992;1.01e-37;3!UBERON:0002073;6.10e-23;5!UBERON:0002067;4.89e-13;9!UBERON:0001003;4.82e-08;15!UBERON:0007376;4.82e-08;15!UBERON:0001281;1.81e-07;2!UBERON:0003497;1.81e-07;2!UBERON:0003909;1.81e-07;2!UBERON:0003835;1.81e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000412,8.41e-38,3;UBERON:0001992,8.41e-38,3;UBERON:0002073,5.46e-23,5;UBERON:0005086,5.46e-23,5;UBERON:0002067,4.60e-13,9;UBERON:0004016,4.60e-13,9;UBERON:0010083,4.60e-13,9;UBERON:0001003,4.65e-08,15;UBERON:0007376,4.65e-08,15;UBERON:0007383,4.65e-08,15;UBERON:0002329,5.31e-08,71;UBERON:0003059,5.31e-08,71;UBERON:0007282,5.31e-08,71;UBERON:0004290,5.31e-08,71;UBERON:0009618,5.31e-08,71;UBERON:0003077,7.00e-08,72;UBERON:0007285,7.00e-08,72;UBERON:0007524,9.16e-08,73;UBERON:0001281,1.87e-07,2;UBERON:0003497,1.87e-07,2;UBERON:0003909,1.87e-07,2;UBERON:0003835,1.87e-07,2;UBERON:0007503,3.16e-07,78;UBERON:0000486,9.41e-07,83 | |||
|phase1_expression=0.181678379270557,0,0.422863212287913,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0.672325146451775,0,0,0,0.492484232307152,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1185468930115,0.286836620748814,0,1.12135520028461,0,0,0.622422070799533,0,0,0.151357427644931,0,0,0,0,0,0.117434498643765,0.161872944368132,0,0.204154171254893,0.122834317311768,0,0,0,1.82032272387605,0.718618141816238,0.168336113954066,0.125118519871964,1.10825646193673,0,0.612975591598039,0.300476117813194,0,0.179389635688862,0,0.423863802319124,0.300091096084402,0.206105058476878,0,0,0.168776332241266,0.292311015483596,0,0.460249493211497,0.161646056818812,0.710019185033229,0.302256294682921,0.847802961552438,0,0,0,0,0,0,0,0,0,1.56449532329816,1.28648187638577,2.76269842704961,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0.8231480226628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.897048674762886,0.87192013766656,0,0,3.57656445851882,0,0.797814349754612,2.08014873822732,0,0,0,0,0,0.823240336780769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0.535286966391485,0.315404830067869,0.234282829985426,0,0,0,0,0,0.434418072340414,0,0,0,0,0,0,1.66435439510497,0,0,0.153461973288062,0,0.384417447767103,0,0.321707842287215,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0.107420244868274,0,0.170453254832202,0.178064071293475,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0.744316738719335,0,0.953150969619124,1.27948895655667,0,0,0,1.43897966066652,1.92175920815238,0.942499218765491,0,0,0,2.43816869544795,0,0,0.272999822815972,0.282810863907425,0,0,0,0,0.578775534266688,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0.683652335082007,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.544017803369474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0.265841714557995,0,0,0,0,0.181848659202559,0,0.464033759878494,0,0.800055529326307,0,0,0,0,0,0,0,0.463044948647668,0,0,0,7.01708958651863,0.176689145945881,0.192914038270915,0,0,0.690860683462397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.636008701306837,0,0,0,0.918736432059601,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0.224263725161227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr15:80800274..80800278,- | |||
}} |
Revision as of 08:31, 11 September 2013
Short description: | p@chr15:80800274..80800278, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:80800274..80800278, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle dermal papilla cell | 8.41e-38 | 3 |
stem cell of epidermis | 8.41e-38 | 3 |
hair follicle cell | 5.46e-23 | 5 |
enteric smooth muscle cell | 1.51e-17 | 3 |
smooth muscle cell of large intestine | 1.51e-17 | 3 |
smooth muscle cell of colon | 1.51e-17 | 3 |
smooth muscle cell of the esophagus | 4.53e-14 | 1 |
fibroblast of lymphatic vessel | 1.45e-07 | 2 |
endothelial cell of sinusoid | 1.87e-07 | 2 |
endothelial cell of hepatic sinusoid | 1.87e-07 | 2 |
bronchial smooth muscle cell | 2.12e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
dermal papilla | 8.41e-38 | 3 |
papillary layer of dermis | 8.41e-38 | 3 |
hair follicle | 5.46e-23 | 5 |
hair follicle placode | 5.46e-23 | 5 |
dermis | 4.60e-13 | 9 |
dermatome | 4.60e-13 | 9 |
future dermis | 4.60e-13 | 9 |
skin epidermis | 4.65e-08 | 15 |
outer epithelium | 4.65e-08 | 15 |
enveloping layer of ectoderm | 4.65e-08 | 15 |
somite | 5.31e-08 | 71 |
presomitic mesoderm | 5.31e-08 | 71 |
presumptive segmental plate | 5.31e-08 | 71 |
dermomyotome | 5.31e-08 | 71 |
trunk paraxial mesoderm | 5.31e-08 | 71 |
paraxial mesoderm | 7.00e-08 | 72 |
presumptive paraxial mesoderm | 7.00e-08 | 72 |
dense mesenchyme tissue | 9.16e-08 | 73 |
hepatic sinusoid | 1.87e-07 | 2 |
abdomen blood vessel | 1.87e-07 | 2 |
sinusoid | 1.87e-07 | 2 |
abdominal segment blood vessel | 1.87e-07 | 2 |
epithelial vesicle | 3.16e-07 | 78 |
multilaminar epithelium | 9.41e-07 | 83 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.