FFCP PHASE1:Hg19::chr15:66375007..66375011,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C1745|description=CAGE_peak_at_chr15:66375007..66375011,-|id=chr15:66375007..66375011,-|ontology_enrichment_celltype=CL:0002605!1.80e-07!3|ontology_enrichment_celltype_v019=CL:0002535;1.91e-15;2|ontology_enrichment_celltype_v019_2=CL:0002535,1.54e-15,2|ontology_enrichment_development_v019=UBERON:0006215;7.20e-85;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:4362;5.86e-07;5|ontology_enrichment_disease_v019_2=DOID:4362,5.38e-07,5|ontology_enrichment_uberon=UBERON:0001049!1.15e-60!57;UBERON:0005068!1.15e-60!57;UBERON:0006241!1.15e-60!57;UBERON:0007135!1.15e-60!57;UBERON:0002616!7.14e-52!59;UBERON:0001017!2.40e-45!82;UBERON:0003075!4.30e-45!86;UBERON:0007284!4.30e-45!86;UBERON:0005743!4.85e-45!86;UBERON:0002346!1.15e-44!90;UBERON:0002780!3.38e-43!41;UBERON:0001890!3.38e-43!41;UBERON:0006240!3.38e-43!41;UBERON:0000955!4.18e-42!69;UBERON:0006238!4.18e-42!69;UBERON:0003080!5.43e-42!42;UBERON:0000073!6.33e-42!94;UBERON:0001016!6.33e-42!94;UBERON:0002020!6.44e-39!34;UBERON:0003528!6.44e-39!34;UBERON:0001893!1.51e-38!34;UBERON:0002791!1.18e-36!33;UBERON:0001869!2.12e-34!32;UBERON:0003056!1.20e-28!61;UBERON:0000033!1.14e-24!123;UBERON:0007023!1.21e-24!115;UBERON:0000956!1.35e-23!25;UBERON:0000203!1.35e-23!25;UBERON:0000924!5.07e-23!173;UBERON:0006601!5.07e-23!173;UBERON:0000153!5.21e-23!129;UBERON:0007811!5.21e-23!129;UBERON:0004121!1.05e-22!169;UBERON:0003076!3.06e-19!15;UBERON:0003057!3.06e-19!15;UBERON:0002619!1.76e-18!22;UBERON:0002308!8.69e-18!9;UBERON:0000125!8.69e-18!9;UBERON:0004733!1.67e-16!12;UBERON:0002028!1.67e-16!12;UBERON:0007277!1.67e-16!12;UBERON:0004732!4.40e-15!13;UBERON:0002298!5.72e-15!8;UBERON:0001950!1.17e-14!20;UBERON:0002420!1.24e-13!9;UBERON:0007245!1.24e-13!9;UBERON:0010009!1.24e-13!9;UBERON:0010011!1.24e-13!9;UBERON:0000454!1.24e-13!9;UBERON:0000025!1.41e-13!194;UBERON:0009663!3.08e-13!7;UBERON:0000369!6.29e-11!4;UBERON:0002435!6.29e-11!4;UBERON:0000204!6.29e-11!4;UBERON:0010082!6.29e-11!4;UBERON:0002680!1.28e-10!9;UBERON:0001895!1.28e-10!9;UBERON:0010092!1.28e-10!9;UBERON:0000064!1.48e-10!219;UBERON:0000200!2.43e-10!6;UBERON:0000349!7.22e-09!5;UBERON:0004111!7.79e-09!241;UBERON:0006331!1.00e-08!3;UBERON:0000483!1.03e-08!309;UBERON:0005383!1.11e-08!3;UBERON:0005382!1.11e-08!3;UBERON:0001872!1.24e-08!5;UBERON:0000988!1.47e-08!3;UBERON:0000119!1.63e-08!312;UBERON:0002771!3.93e-08!3;UBERON:0001896!5.15e-08!3;UBERON:0005290!5.15e-08!3;UBERON:0010096!5.15e-08!3;UBERON:0000477!6.65e-07!286|ontology_enrichment_uberon_v019=UBERON:0002037;5.61e-43;6!UBERON:0002680;5.63e-29;9!UBERON:0001895;5.63e-29;9!UBERON:0004733;5.89e-22;12!UBERON:0002028;5.89e-22;12!UBERON:0004732;2.47e-20;13!UBERON:0006955;1.91e-15;2!UBERON:0004801;1.91e-15;2!UBERON:0000073;1.62e-07;53!UBERON:0002616;1.62e-07;53!UBERON:0001872;5.86e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0002037,3.65e-43,6;UBERON:0006215,3.65e-43,6;UBERON:0002680,4.23e-29,9;UBERON:0001895,4.23e-29,9;UBERON:0010092,4.23e-29,9;UBERON:0004733,4.75e-22,12;UBERON:0002028,4.75e-22,12;UBERON:0007277,4.75e-22,12;UBERON:0004732,2.03e-20,13;UBERON:0003076,8.28e-18,15;UBERON:0003057,8.28e-18,15;UBERON:0006955,1.54e-15,2;UBERON:0004801,1.54e-15,2;UBERON:0000073,6.69e-09,53;UBERON:0002616,6.69e-09,53;UBERON:0001017,7.26e-09,81;UBERON:0001049,1.87e-08,56;UBERON:0005068,1.87e-08,56;UBERON:0006241,1.87e-08,56;UBERON:0007135,1.87e-08,56;UBERON:0001016,5.05e-08,89;UBERON:0000955,5.84e-07,68;UBERON:0006238,5.84e-07,68;UBERON:0001872,6.77e-07,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0.422008249231538,0,0,0,0.19924798825107,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1745 | |||
|description=CAGE_peak_at_chr15:66375007..66375011,- | |||
|id=chr15:66375007..66375011,- | |||
|ontology_enrichment_celltype=CL:0002605!1.80e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002535;1.91e-15;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,1.54e-15,2 | |||
|ontology_enrichment_development_v019=UBERON:0006215;7.20e-85;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4362;5.86e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,5.38e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.15e-60!57;UBERON:0005068!1.15e-60!57;UBERON:0006241!1.15e-60!57;UBERON:0007135!1.15e-60!57;UBERON:0002616!7.14e-52!59;UBERON:0001017!2.40e-45!82;UBERON:0003075!4.30e-45!86;UBERON:0007284!4.30e-45!86;UBERON:0005743!4.85e-45!86;UBERON:0002346!1.15e-44!90;UBERON:0002780!3.38e-43!41;UBERON:0001890!3.38e-43!41;UBERON:0006240!3.38e-43!41;UBERON:0000955!4.18e-42!69;UBERON:0006238!4.18e-42!69;UBERON:0003080!5.43e-42!42;UBERON:0000073!6.33e-42!94;UBERON:0001016!6.33e-42!94;UBERON:0002020!6.44e-39!34;UBERON:0003528!6.44e-39!34;UBERON:0001893!1.51e-38!34;UBERON:0002791!1.18e-36!33;UBERON:0001869!2.12e-34!32;UBERON:0003056!1.20e-28!61;UBERON:0000033!1.14e-24!123;UBERON:0007023!1.21e-24!115;UBERON:0000956!1.35e-23!25;UBERON:0000203!1.35e-23!25;UBERON:0000924!5.07e-23!173;UBERON:0006601!5.07e-23!173;UBERON:0000153!5.21e-23!129;UBERON:0007811!5.21e-23!129;UBERON:0004121!1.05e-22!169;UBERON:0003076!3.06e-19!15;UBERON:0003057!3.06e-19!15;UBERON:0002619!1.76e-18!22;UBERON:0002308!8.69e-18!9;UBERON:0000125!8.69e-18!9;UBERON:0004733!1.67e-16!12;UBERON:0002028!1.67e-16!12;UBERON:0007277!1.67e-16!12;UBERON:0004732!4.40e-15!13;UBERON:0002298!5.72e-15!8;UBERON:0001950!1.17e-14!20;UBERON:0002420!1.24e-13!9;UBERON:0007245!1.24e-13!9;UBERON:0010009!1.24e-13!9;UBERON:0010011!1.24e-13!9;UBERON:0000454!1.24e-13!9;UBERON:0000025!1.41e-13!194;UBERON:0009663!3.08e-13!7;UBERON:0000369!6.29e-11!4;UBERON:0002435!6.29e-11!4;UBERON:0000204!6.29e-11!4;UBERON:0010082!6.29e-11!4;UBERON:0002680!1.28e-10!9;UBERON:0001895!1.28e-10!9;UBERON:0010092!1.28e-10!9;UBERON:0000064!1.48e-10!219;UBERON:0000200!2.43e-10!6;UBERON:0000349!7.22e-09!5;UBERON:0004111!7.79e-09!241;UBERON:0006331!1.00e-08!3;UBERON:0000483!1.03e-08!309;UBERON:0005383!1.11e-08!3;UBERON:0005382!1.11e-08!3;UBERON:0001872!1.24e-08!5;UBERON:0000988!1.47e-08!3;UBERON:0000119!1.63e-08!312;UBERON:0002771!3.93e-08!3;UBERON:0001896!5.15e-08!3;UBERON:0005290!5.15e-08!3;UBERON:0010096!5.15e-08!3;UBERON:0000477!6.65e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;5.61e-43;6!UBERON:0002680;5.63e-29;9!UBERON:0001895;5.63e-29;9!UBERON:0004733;5.89e-22;12!UBERON:0002028;5.89e-22;12!UBERON:0004732;2.47e-20;13!UBERON:0006955;1.91e-15;2!UBERON:0004801;1.91e-15;2!UBERON:0000073;1.62e-07;53!UBERON:0002616;1.62e-07;53!UBERON:0001872;5.86e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,3.65e-43,6;UBERON:0006215,3.65e-43,6;UBERON:0002680,4.23e-29,9;UBERON:0001895,4.23e-29,9;UBERON:0010092,4.23e-29,9;UBERON:0004733,4.75e-22,12;UBERON:0002028,4.75e-22,12;UBERON:0007277,4.75e-22,12;UBERON:0004732,2.03e-20,13;UBERON:0003076,8.28e-18,15;UBERON:0003057,8.28e-18,15;UBERON:0006955,1.54e-15,2;UBERON:0004801,1.54e-15,2;UBERON:0000073,6.69e-09,53;UBERON:0002616,6.69e-09,53;UBERON:0001017,7.26e-09,81;UBERON:0001049,1.87e-08,56;UBERON:0005068,1.87e-08,56;UBERON:0006241,1.87e-08,56;UBERON:0007135,1.87e-08,56;UBERON:0001016,5.05e-08,89;UBERON:0000955,5.84e-07,68;UBERON:0006238,5.84e-07,68;UBERON:0001872,6.77e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0.422008249231538,0,0,0,0.19924798825107,0,1.51159648712566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.689486746482929,0.291604613383254,0.173624994933292,0.885741385813839,0.241192877250816,1.52581736317083,1.43753037910592,5.31985714116385,0,0.10893846351899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18608451472249,0.247127877893006,0,0.269604531922708,0,0,0.547364367646998,0,0,0,0,0,0.063186579628488,0.300646838828985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0882561266915003,0.225980740780532,0,0,0.443175571691151,0,0,0,0,0,0,0.686379991447858,0,0,0,0,0,0,0,0,0.410716136675979,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.544813624446302,0,0,0,0,0,0.182248669974074,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.92562821219883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0.250381861413,0.573409195690071,0.221858103073705,0.18628920882415,0,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511577485214607,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0.385375350578757,0,0,0,0.252071696221718,0.207471757392654,0.484426936895553,0,0,0,0,0,0,0.690359926060101,0.198916222116275,0,0,0,0,0,0,0.202612753855184,0,0.413373593002368,0.19024743058172,1.09394961803644,0,0,0,0,0,0.336283722218824,0,0.227662191351298,0,0,0,0.339848664884159,0.526182188502793,0,0,0,0.628462359664008,0.280272163313789,0,0,0,0.285906176706625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.467878926924211,0.994753875806841,0,0,0.329821550236287,0.150962843566674,0,0.655678681511872,0,0,0,0.392616934229891,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0.573358332605805,0.157771562193185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0.724030971033267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr15:66375007..66375011,- | |||
}} |
Revision as of 07:55, 11 September 2013
Short description: | p@chr15:66375007..66375011, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:66375007..66375011, - |
Coexpression cluster: | C1745_cerebellum_small_optic_hippocampus_occipital_Neural_spinal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 1.54e-15 | 2 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 3.65e-43 | 6 |
rhombic lip | 3.65e-43 | 6 |
regional part of metencephalon | 4.23e-29 | 9 |
metencephalon | 4.23e-29 | 9 |
future metencephalon | 4.23e-29 | 9 |
segmental subdivision of hindbrain | 4.75e-22 | 12 |
hindbrain | 4.75e-22 | 12 |
presumptive hindbrain | 4.75e-22 | 12 |
segmental subdivision of nervous system | 2.03e-20 | 13 |
posterior neural tube | 8.28e-18 | 15 |
chordal neural plate | 8.28e-18 | 15 |
uterine epithelium | 1.54e-15 | 2 |
cervix epithelium | 1.54e-15 | 2 |
regional part of nervous system | 6.69e-09 | 53 |
regional part of brain | 6.69e-09 | 53 |
central nervous system | 7.26e-09 | 81 |
neural tube | 1.87e-08 | 56 |
neural rod | 1.87e-08 | 56 |
future spinal cord | 1.87e-08 | 56 |
neural keel | 1.87e-08 | 56 |
nervous system | 5.05e-08 | 89 |
brain | 5.84e-07 | 68 |
future brain | 5.84e-07 | 68 |
parietal lobe | 6.77e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 5.38e-07 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.