FFCP PHASE1:Hg19::chr15:58820746..58820787,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C464|description=CAGE_peak_at_chr15:58820746..58820787,+|id=chr15:58820746..58820787,+|ontology_enrichment_celltype=CL:0000181!2.06e-14!12;CL:0000417!2.06e-14!12;CL:0000668!2.06e-14!12;CL:0000414!2.06e-14!12;CL:0000412!2.06e-14!12;CL:0000182!2.06e-14!12;CL:0002541!1.59e-07!3;CL:0000239!1.87e-07!3;CL:1000615!1.87e-07!3;CL:0002306!1.87e-07!3|ontology_enrichment_celltype_v019=CL:0000182;3.25e-17;12|ontology_enrichment_celltype_v019_2=CL:0000182,3.25e-17,12|ontology_enrichment_development_v019=UBERON:0004161;5.87e-09;11!UBERON:0009497;1.02e-07;13!UBERON:0003104;3.20e-07;31|ontology_enrichment_disease=DOID:4468!1.56e-11!2|ontology_enrichment_disease_v019=DOID:4468;2.55e-45;2|ontology_enrichment_disease_v019_2=DOID:4468,2.55e-45,2|ontology_enrichment_uberon=UBERON:0005172!1.01e-16!55;UBERON:0005173!1.01e-16!55;UBERON:0002107!1.08e-15!19;UBERON:0006925!1.08e-15!19;UBERON:0008836!1.08e-15!19;UBERON:0002417!9.47e-15!61;UBERON:0000916!9.47e-15!61;UBERON:0003929!1.49e-14!54;UBERON:0008835!2.25e-13!22;UBERON:0003894!2.25e-13!22;UBERON:0009854!9.77e-13!23;UBERON:0002368!3.00e-12!35;UBERON:0007499!1.30e-11!25;UBERON:0009497!1.30e-11!25;UBERON:0000015!1.30e-11!25;UBERON:0002423!1.30e-11!25;UBERON:0006235!1.30e-11!25;UBERON:0004161!1.30e-11!25;UBERON:0002530!3.77e-11!59;UBERON:0000949!3.97e-11!45;UBERON:0005057!4.07e-11!26;UBERON:0009856!4.07e-11!26;UBERON:0002365!4.09e-09!31;UBERON:0002330!4.09e-09!31;UBERON:0006554!6.17e-09!44;UBERON:0001008!1.07e-08!45;UBERON:0005911!1.42e-08!82;UBERON:0005177!3.47e-08!107;UBERON:0002113!7.71e-08!27;UBERON:0003918!7.71e-08!27;UBERON:0005095!7.71e-08!27;UBERON:0007687!7.71e-08!27;UBERON:0000476!1.59e-07!3;UBERON:0000920!1.59e-07!3;UBERON:0006853!1.87e-07!3;UBERON:0007685!1.87e-07!3;UBERON:0004134!1.87e-07!3|ontology_enrichment_uberon_v019=UBERON:0002107;4.84e-29;19!UBERON:0006925;4.84e-29;19!UBERON:0002423;3.71e-22;25!UBERON:0002365;7.00e-18;31!UBERON:0002330;7.00e-18;31!UBERON:0002368;1.79e-15;33!UBERON:0000949;2.85e-11;43!UBERON:0005172;6.70e-11;52!UBERON:0005173;6.70e-11;52!UBERON:0002417;1.13e-08;58!UBERON:0000916;1.13e-08;58!UBERON:0001007;1.93e-07;81|ontology_enrichment_uberon_v019_2=UBERON:0002107,4.56e-29,19;UBERON:0006925,4.56e-29,19;UBERON:0008836,4.56e-29,19;UBERON:0008835,3.74e-25,22;UBERON:0003894,3.74e-25,22;UBERON:0009854,4.48e-24,23;UBERON:0007499,3.55e-22,25;UBERON:0009497,3.55e-22,25;UBERON:0000015,3.55e-22,25;UBERON:0002423,3.55e-22,25;UBERON:0006235,3.55e-22,25;UBERON:0004161,3.55e-22,25;UBERON:0009856,2.46e-21,26;UBERON:0002365,6.09e-18,31;UBERON:0002330,6.09e-18,31;UBERON:0002368,6.38e-16,35;UBERON:0005172,1.11e-14,54;UBERON:0005173,1.11e-14,54;UBERON:0002417,3.24e-13,60;UBERON:0000916,3.24e-13,60;UBERON:0000949,1.97e-12,45;UBERON:0003929,2.17e-10,54;UBERON:0002530,1.60e-09,59;UBERON:0005177,7.77e-08,101;UBERON:0009569,4.68e-07,112;UBERON:0005911,7.04e-07,82|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.484938170456436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,2.94848165003288,5.31710916013264,0,0.491953754172454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0.764628819135115,0,0.223874754722178,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659006605437454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434589487688032,0.638002319463839,0.274792780205587,0,0,0,0,0,0,0,0,0,12.2378877426256,3.91758739581955,0.141353071433941,0,0,0.265372693510018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0.223171457441873,0,0,0,0.236349546921671,0.412079291905832,0.202210631562555,0,0,0,0,0,0,0,0,0,0,0,0.315222829196793,0.524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,2.4913879725274,1.32506888912221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C464 | |||
|description=CAGE_peak_at_chr15:58820746..58820787,+ | |||
|id=chr15:58820746..58820787,+ | |||
|ontology_enrichment_celltype=CL:0000181!2.06e-14!12;CL:0000417!2.06e-14!12;CL:0000668!2.06e-14!12;CL:0000414!2.06e-14!12;CL:0000412!2.06e-14!12;CL:0000182!2.06e-14!12;CL:0002541!1.59e-07!3;CL:0000239!1.87e-07!3;CL:1000615!1.87e-07!3;CL:0002306!1.87e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000182;3.25e-17;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.25e-17,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;5.87e-09;11!UBERON:0009497;1.02e-07;13!UBERON:0003104;3.20e-07;31 | |||
|ontology_enrichment_disease=DOID:4468!1.56e-11!2 | |||
|ontology_enrichment_disease_v019=DOID:4468;2.55e-45;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,2.55e-45,2 | |||
|ontology_enrichment_uberon=UBERON:0005172!1.01e-16!55;UBERON:0005173!1.01e-16!55;UBERON:0002107!1.08e-15!19;UBERON:0006925!1.08e-15!19;UBERON:0008836!1.08e-15!19;UBERON:0002417!9.47e-15!61;UBERON:0000916!9.47e-15!61;UBERON:0003929!1.49e-14!54;UBERON:0008835!2.25e-13!22;UBERON:0003894!2.25e-13!22;UBERON:0009854!9.77e-13!23;UBERON:0002368!3.00e-12!35;UBERON:0007499!1.30e-11!25;UBERON:0009497!1.30e-11!25;UBERON:0000015!1.30e-11!25;UBERON:0002423!1.30e-11!25;UBERON:0006235!1.30e-11!25;UBERON:0004161!1.30e-11!25;UBERON:0002530!3.77e-11!59;UBERON:0000949!3.97e-11!45;UBERON:0005057!4.07e-11!26;UBERON:0009856!4.07e-11!26;UBERON:0002365!4.09e-09!31;UBERON:0002330!4.09e-09!31;UBERON:0006554!6.17e-09!44;UBERON:0001008!1.07e-08!45;UBERON:0005911!1.42e-08!82;UBERON:0005177!3.47e-08!107;UBERON:0002113!7.71e-08!27;UBERON:0003918!7.71e-08!27;UBERON:0005095!7.71e-08!27;UBERON:0007687!7.71e-08!27;UBERON:0000476!1.59e-07!3;UBERON:0000920!1.59e-07!3;UBERON:0006853!1.87e-07!3;UBERON:0007685!1.87e-07!3;UBERON:0004134!1.87e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;4.84e-29;19!UBERON:0006925;4.84e-29;19!UBERON:0002423;3.71e-22;25!UBERON:0002365;7.00e-18;31!UBERON:0002330;7.00e-18;31!UBERON:0002368;1.79e-15;33!UBERON:0000949;2.85e-11;43!UBERON:0005172;6.70e-11;52!UBERON:0005173;6.70e-11;52!UBERON:0002417;1.13e-08;58!UBERON:0000916;1.13e-08;58!UBERON:0001007;1.93e-07;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,4.56e-29,19;UBERON:0006925,4.56e-29,19;UBERON:0008836,4.56e-29,19;UBERON:0008835,3.74e-25,22;UBERON:0003894,3.74e-25,22;UBERON:0009854,4.48e-24,23;UBERON:0007499,3.55e-22,25;UBERON:0009497,3.55e-22,25;UBERON:0000015,3.55e-22,25;UBERON:0002423,3.55e-22,25;UBERON:0006235,3.55e-22,25;UBERON:0004161,3.55e-22,25;UBERON:0009856,2.46e-21,26;UBERON:0002365,6.09e-18,31;UBERON:0002330,6.09e-18,31;UBERON:0002368,6.38e-16,35;UBERON:0005172,1.11e-14,54;UBERON:0005173,1.11e-14,54;UBERON:0002417,3.24e-13,60;UBERON:0000916,3.24e-13,60;UBERON:0000949,1.97e-12,45;UBERON:0003929,2.17e-10,54;UBERON:0002530,1.60e-09,59;UBERON:0005177,7.77e-08,101;UBERON:0009569,4.68e-07,112;UBERON:0005911,7.04e-07,82 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.484938170456436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,2.94848165003288,5.31710916013264,0,0.491953754172454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0.764628819135115,0,0.223874754722178,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659006605437454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434589487688032,0.638002319463839,0.274792780205587,0,0,0,0,0,0,0,0,0,12.2378877426256,3.91758739581955,0.141353071433941,0,0,0.265372693510018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0.223171457441873,0,0,0,0.236349546921671,0.412079291905832,0.202210631562555,0,0,0,0,0,0,0,0,0,0,0,0.315222829196793,0.524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,2.4913879725274,1.32506888912221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0,0,0,0,0.078493092850514,0,0,0,1.29556554731173,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223710863595585,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,1.00326405540328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190941474834495,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p@chr15:58820746..58820787,+ | |||
}} |
Revision as of 07:38, 11 September 2013
Short description: | p@chr15:58820746..58820787, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:58820746..58820787, + |
Coexpression cluster: | C464_clear_serous_pagetoid_squamous_chorionic_thyroid_renal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.25e-17 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 4.56e-29 | 19 |
digestive gland | 4.56e-29 | 19 |
liver bud | 4.56e-29 | 19 |
hepatic diverticulum | 3.74e-25 | 22 |
liver primordium | 3.74e-25 | 22 |
digestive tract diverticulum | 4.48e-24 | 23 |
epithelial sac | 3.55e-22 | 25 |
epithelium of foregut-midgut junction | 3.55e-22 | 25 |
anatomical boundary | 3.55e-22 | 25 |
hepatobiliary system | 3.55e-22 | 25 |
foregut-midgut junction | 3.55e-22 | 25 |
septum transversum | 3.55e-22 | 25 |
sac | 2.46e-21 | 26 |
exocrine gland | 6.09e-18 | 31 |
exocrine system | 6.09e-18 | 31 |
endocrine gland | 6.38e-16 | 35 |
abdomen element | 1.11e-14 | 54 |
abdominal segment element | 1.11e-14 | 54 |
abdominal segment of trunk | 3.24e-13 | 60 |
abdomen | 3.24e-13 | 60 |
endocrine system | 1.97e-12 | 45 |
gut epithelium | 2.17e-10 | 54 |
gland | 1.60e-09 | 59 |
trunk region element | 7.77e-08 | 101 |
subdivision of trunk | 4.68e-07 | 112 |
endo-epithelium | 7.04e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 2.55e-45 | 2 |
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