FFCP PHASE1:Hg19::chr15:42179064..42179072,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C41|description=CAGE_peak_at_chr15:42179064..42179072,-|id=chr15:42179064..42179072,-|ontology_enrichment_celltype=CL:0002586!1.09e-10!3;CL:0000149!2.43e-08!4;CL:0000243!1.21e-07!15;CL:0000125!1.21e-07!15;CL:0000030!1.21e-07!15;CL:0000339!1.21e-07!15;CL:0000095!6.19e-07!17;CL:0000123!6.19e-07!17|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0003056;9.74e-88;3!UBERON:0006238;2.63e-07;10|ontology_enrichment_disease=DOID:3093!1.94e-10!11;DOID:5409!2.11e-08!4|ontology_enrichment_disease_v019=DOID:3093;8.38e-07;11|ontology_enrichment_disease_v019_2=DOID:3093,8.38e-07,11|ontology_enrichment_uberon=UBERON:0000966!2.30e-51!5;UBERON:0005388!2.30e-51!5;UBERON:0001802!2.30e-51!5;UBERON:0000970!3.53e-23!20;UBERON:0002104!4.18e-22!21;UBERON:0000020!3.07e-20!23;UBERON:0001032!2.02e-19!24;UBERON:0004456!2.02e-19!24;UBERON:0002360!2.74e-15!2;UBERON:0000094!2.74e-15!2;UBERON:0007645!2.74e-15!2;UBERON:0000019!3.62e-14!19;UBERON:0000047!3.62e-14!19;UBERON:0004088!3.62e-14!19;UBERON:0003072!3.62e-14!19;UBERON:0003071!3.62e-14!19;UBERON:0004128!3.62e-14!19;UBERON:0001456!6.85e-13!21;UBERON:0001781!1.09e-10!3;UBERON:0001782!1.09e-10!3;UBERON:0005424!1.09e-10!3;UBERON:0005085!1.57e-09!29;UBERON:0005743!2.35e-08!86;UBERON:0000073!1.33e-07!94;UBERON:0001016!1.33e-07!94|ontology_enrichment_uberon_v019=UBERON:0000966;2.87e-53;5!UBERON:0005388;2.87e-53;5!UBERON:0001802;2.87e-53;5!UBERON:0000970;1.56e-30;20!UBERON:0002104;3.84e-29;21!UBERON:0000020;1.01e-26;23!UBERON:0001032;1.16e-25;24!UBERON:0004456;1.16e-25;24!UBERON:0000019;5.27e-15;19!UBERON:0000047;5.27e-15;19!UBERON:0004088;5.27e-15;19!UBERON:0010230;5.27e-15;19!UBERON:0001456;1.09e-13;21|ontology_enrichment_uberon_v019_2=UBERON:0000966,1.22e-44,6;UBERON:0005388,1.22e-44,6;UBERON:0001802,1.22e-44,6;UBERON:0000970,3.84e-29,21;UBERON:0002104,3.84e-29,21;UBERON:0000020,1.16e-25,24;UBERON:0001032,1.16e-25,24;UBERON:0004456,1.16e-25,24;UBERON:0000019,2.58e-14,20;UBERON:0000047,2.58e-14,20;UBERON:0010312,2.58e-14,20;UBERON:0004088,2.58e-14,20;UBERON:0010230,2.58e-14,20;UBERON:0003072,2.58e-14,20;UBERON:0004128,2.58e-14,20;UBERON:0003071,2.58e-14,20;UBERON:0001456,4.01e-13,22;UBERON:0005085,1.20e-09,31|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.16373037092745,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276697269872462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.86309147790539,1.26410889386181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.549702583727146,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr15:42179064..42179072,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C41 | |||
|description=CAGE_peak_at_chr15:42179064..42179072,- | |||
|id=chr15:42179064..42179072,- | |||
|ontology_enrichment_celltype=CL:0002586!1.09e-10!3;CL:0000149!2.43e-08!4;CL:0000243!1.21e-07!15;CL:0000125!1.21e-07!15;CL:0000030!1.21e-07!15;CL:0000339!1.21e-07!15;CL:0000095!6.19e-07!17;CL:0000123!6.19e-07!17 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;9.74e-88;3!UBERON:0006238;2.63e-07;10 | |||
|ontology_enrichment_disease=DOID:3093!1.94e-10!11;DOID:5409!2.11e-08!4 | |||
|ontology_enrichment_disease_v019=DOID:3093;8.38e-07;11 | |||
|ontology_enrichment_disease_v019_2=DOID:3093,8.38e-07,11 | |||
|ontology_enrichment_uberon=UBERON:0000966!2.30e-51!5;UBERON:0005388!2.30e-51!5;UBERON:0001802!2.30e-51!5;UBERON:0000970!3.53e-23!20;UBERON:0002104!4.18e-22!21;UBERON:0000020!3.07e-20!23;UBERON:0001032!2.02e-19!24;UBERON:0004456!2.02e-19!24;UBERON:0002360!2.74e-15!2;UBERON:0000094!2.74e-15!2;UBERON:0007645!2.74e-15!2;UBERON:0000019!3.62e-14!19;UBERON:0000047!3.62e-14!19;UBERON:0004088!3.62e-14!19;UBERON:0003072!3.62e-14!19;UBERON:0003071!3.62e-14!19;UBERON:0004128!3.62e-14!19;UBERON:0001456!6.85e-13!21;UBERON:0001781!1.09e-10!3;UBERON:0001782!1.09e-10!3;UBERON:0005424!1.09e-10!3;UBERON:0005085!1.57e-09!29;UBERON:0005743!2.35e-08!86;UBERON:0000073!1.33e-07!94;UBERON:0001016!1.33e-07!94 | |||
|ontology_enrichment_uberon_v019=UBERON:0000966;2.87e-53;5!UBERON:0005388;2.87e-53;5!UBERON:0001802;2.87e-53;5!UBERON:0000970;1.56e-30;20!UBERON:0002104;3.84e-29;21!UBERON:0000020;1.01e-26;23!UBERON:0001032;1.16e-25;24!UBERON:0004456;1.16e-25;24!UBERON:0000019;5.27e-15;19!UBERON:0000047;5.27e-15;19!UBERON:0004088;5.27e-15;19!UBERON:0010230;5.27e-15;19!UBERON:0001456;1.09e-13;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000966,1.22e-44,6;UBERON:0005388,1.22e-44,6;UBERON:0001802,1.22e-44,6;UBERON:0000970,3.84e-29,21;UBERON:0002104,3.84e-29,21;UBERON:0000020,1.16e-25,24;UBERON:0001032,1.16e-25,24;UBERON:0004456,1.16e-25,24;UBERON:0000019,2.58e-14,20;UBERON:0000047,2.58e-14,20;UBERON:0010312,2.58e-14,20;UBERON:0004088,2.58e-14,20;UBERON:0010230,2.58e-14,20;UBERON:0003072,2.58e-14,20;UBERON:0004128,2.58e-14,20;UBERON:0003071,2.58e-14,20;UBERON:0001456,4.01e-13,22;UBERON:0005085,1.20e-09,31 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.16373037092745,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276697269872462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.86309147790539,1.26410889386181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.549702583727146,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr15:42179064..42179072,- | |||
}} |
Revision as of 06:59, 11 September 2013
Short description: | p@chr15:42179064..42179072, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:42179064..42179072, - |
Coexpression cluster: | C41_retina_eye_medulla_Retinal_medulloblastoma_kidney_pineal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retina | 1.22e-44 | 6 |
photoreceptor array | 1.22e-44 | 6 |
posterior segment of eyeball | 1.22e-44 | 6 |
eye | 3.84e-29 | 21 |
visual system | 3.84e-29 | 21 |
sense organ | 1.16e-25 | 24 |
sensory system | 1.16e-25 | 24 |
entire sense organ system | 1.16e-25 | 24 |
camera-type eye | 2.58e-14 | 20 |
simple eye | 2.58e-14 | 20 |
immature eye | 2.58e-14 | 20 |
ocular region | 2.58e-14 | 20 |
eyeball of camera-type eye | 2.58e-14 | 20 |
optic cup | 2.58e-14 | 20 |
optic vesicle | 2.58e-14 | 20 |
eye primordium | 2.58e-14 | 20 |
face | 4.01e-13 | 22 |
ectodermal placode | 1.20e-09 | 31 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 8.38e-07 | 11 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.