FFCP PHASE1:Hg19::chr14:63512154..63512187,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=27133|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6254|TSSclassifier=S|UniProt=Q8NCM2|association_with_transcript=0bp_to_ENST00000322893_5end|coexpression_cluster_id=C3442|description=CAGE_peak_1_at_KCNH5_5end|id=chr14:63512154..63512187,-|ontology_enrichment_celltype=CL:0002150!3.35e-07!3;CL:0000861!3.35e-07!3|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006601;3.63e-12;82!UBERON:0008947;1.44e-09;29|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!9.49e-57!57;UBERON:0005068!9.49e-57!57;UBERON:0006241!9.49e-57!57;UBERON:0007135!9.49e-57!57;UBERON:0001017!2.84e-54!82;UBERON:0005743!1.53e-53!86;UBERON:0000073!3.55e-51!94;UBERON:0001016!3.55e-51!94;UBERON:0002780!2.63e-50!41;UBERON:0001890!2.63e-50!41;UBERON:0006240!2.63e-50!41;UBERON:0003080!7.06e-49!42;UBERON:0000955!7.21e-49!69;UBERON:0006238!7.21e-49!69;UBERON:0001869!9.77e-49!32;UBERON:0002020!1.33e-48!34;UBERON:0003528!1.33e-48!34;UBERON:0001893!1.59e-48!34;UBERON:0002791!1.84e-46!33;UBERON:0002616!2.67e-46!59;UBERON:0000956!4.75e-40!25;UBERON:0000203!4.75e-40!25;UBERON:0001950!1.88e-39!20;UBERON:0003075!3.92e-39!86;UBERON:0007284!3.92e-39!86;UBERON:0002619!4.17e-39!22;UBERON:0002346!1.62e-38!90;UBERON:0003056!8.92e-33!61;UBERON:0007023!1.08e-28!115;UBERON:0000924!2.15e-25!173;UBERON:0006601!2.15e-25!173;UBERON:0004121!2.76e-25!169;UBERON:0000033!1.37e-24!123;UBERON:0000153!7.84e-23!129;UBERON:0007811!7.84e-23!129;UBERON:0001737!2.55e-17!9;UBERON:0000200!8.89e-14!6;UBERON:0001871!7.53e-13!7;UBERON:0002021!2.68e-12!5;UBERON:0001872!1.45e-11!5;UBERON:0000025!2.03e-11!194;UBERON:0000064!4.07e-11!219;UBERON:0002308!3.61e-10!9;UBERON:0000125!3.61e-10!9;UBERON:0002420!4.50e-10!9;UBERON:0007245!4.50e-10!9;UBERON:0010009!4.50e-10!9;UBERON:0010011!4.50e-10!9;UBERON:0000454!4.50e-10!9;UBERON:0000477!4.94e-10!286;UBERON:0003076!1.30e-09!15;UBERON:0003057!1.30e-09!15;UBERON:0002298!5.78e-09!8;UBERON:0000369!2.15e-08!4;UBERON:0002435!2.15e-08!4;UBERON:0000204!2.15e-08!4;UBERON:0010082!2.15e-08!4;UBERON:0004111!6.85e-08!241;UBERON:0000922!7.97e-08!612;UBERON:0002771!1.27e-07!3;UBERON:0000062!2.30e-07!511;UBERON:0000988!2.45e-07!3;UBERON:0001557!3.49e-07!19;UBERON:0000349!5.64e-07!5;UBERON:0009663!6.62e-07!7;UBERON:0002240!9.13e-07!3|ontology_enrichment_uberon_v019=UBERON:0002619;9.20e-60;22!UBERON:0001950;1.02e-59;20!UBERON:0000956;3.06e-52;25!UBERON:0000203;3.06e-52;25!UBERON:0001869;3.24e-43;32!UBERON:0003528;2.30e-42;34!UBERON:0002020;2.30e-42;34!UBERON:0001893;1.23e-39;34!UBERON:0002791;1.14e-38;32!UBERON:0001737;1.88e-28;9!UBERON:0001557;1.88e-28;9!UBERON:0002780;2.34e-27;41!UBERON:0001890;2.34e-27;41!UBERON:0000073;3.31e-25;53!UBERON:0002616;3.31e-25;53!UBERON:0000200;3.49e-22;6!UBERON:0002021;1.27e-19;5!UBERON:0000955;3.93e-19;68!UBERON:0001017;3.94e-19;75!UBERON:0001872;2.56e-18;5!UBERON:0001016;3.51e-15;83!UBERON:0002298;2.46e-14;6!UBERON:0001871;1.22e-12;6!UBERON:0001870;2.94e-12;3!UBERON:0000988;2.19e-11;3!UBERON:0002702;9.93e-09;2!UBERON:0002771;1.93e-08;2!UBERON:0002148;7.37e-08;2!UBERON:0006331;7.37e-08;2!UBERON:0009662;7.37e-08;2!UBERON:0000072;4.26e-07;37!UBERON:0004733;5.16e-07;12!UBERON:0002028;5.16e-07;12!UBERON:0011216;6.02e-07;132|ontology_enrichment_uberon_v019_2=UBERON:0001950,6.25e-60,20;UBERON:0002619,6.33e-60,22;UBERON:0000956,2.21e-52,25;UBERON:0000203,2.21e-52,25;UBERON:0003528,6.38e-50,34;UBERON:0002020,6.38e-50,34;UBERON:0001049,7.31e-50,56;UBERON:0005068,7.31e-50,56;UBERON:0006241,7.31e-50,56;UBERON:0007135,7.31e-50,56;UBERON:0001869,4.44e-49,32;UBERON:0001893,6.22e-46,34;UBERON:0000073,6.86e-46,53;UBERON:0002616,6.86e-46,53;UBERON:0002791,2.14e-44,32;UBERON:0000955,1.76e-42,68;UBERON:0006238,1.76e-42,68;UBERON:0001017,1.91e-42,81;UBERON:0002780,7.88e-41,41;UBERON:0001890,7.88e-41,41;UBERON:0003080,7.88e-41,41;UBERON:0006240,7.88e-41,41;UBERON:0001016,7.28e-40,89;UBERON:0003075,3.07e-34,82;UBERON:0007284,3.07e-34,82;UBERON:0002346,2.71e-32,86;UBERON:0003056,3.37e-28,61;UBERON:0001737,4.05e-28,9;UBERON:0010371,3.02e-27,104;UBERON:0011216,1.60e-25,223;UBERON:0000200,3.92e-22,6;UBERON:0007023,3.98e-21,114;UBERON:0004121,7.77e-21,171;UBERON:0000924,7.77e-21,171;UBERON:0006601,7.77e-21,171;UBERON:0010314,7.12e-20,132;UBERON:0002021,1.23e-19,5;UBERON:0001872,2.11e-18,5;UBERON:0002298,4.61e-14,6;UBERON:0001871,9.78e-13,6;UBERON:0001557,1.76e-12,19;UBERON:0001870,2.89e-12,3;UBERON:0000988,2.72e-11,3;UBERON:0000025,2.88e-10,192;UBERON:0003076,2.97e-10,15;UBERON:0003057,2.97e-10,15;UBERON:0002702,1.07e-08,2;UBERON:0002771,2.16e-08,2;UBERON:0002148,9.59e-08,2;UBERON:0006331,9.59e-08,2;UBERON:0009662,9.59e-08,2;UBERON:0004733,6.93e-07,12;UBERON:0002028,6.93e-07,12;UBERON:0007277,6.93e-07,12;UBERON:0008947,8.03e-07,38;UBERON:0003258,8.03e-07,38;UBERON:0004111,8.27e-07,240;UBERON:0000349,9.70e-07,5|phase1_expression=0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=27133 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6254 | |||
|TSSclassifier=S | |||
|UniProt=Q8NCM2 | |||
|association_with_transcript=0bp_to_ENST00000322893_5end | |||
|coexpression_cluster_id=C3442 | |||
|description=CAGE_peak_1_at_KCNH5_5end | |||
|id=chr14:63512154..63512187,- | |||
|ontology_enrichment_celltype=CL:0002150!3.35e-07!3;CL:0000861!3.35e-07!3 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.63e-12;82!UBERON:0008947;1.44e-09;29 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!9.49e-57!57;UBERON:0005068!9.49e-57!57;UBERON:0006241!9.49e-57!57;UBERON:0007135!9.49e-57!57;UBERON:0001017!2.84e-54!82;UBERON:0005743!1.53e-53!86;UBERON:0000073!3.55e-51!94;UBERON:0001016!3.55e-51!94;UBERON:0002780!2.63e-50!41;UBERON:0001890!2.63e-50!41;UBERON:0006240!2.63e-50!41;UBERON:0003080!7.06e-49!42;UBERON:0000955!7.21e-49!69;UBERON:0006238!7.21e-49!69;UBERON:0001869!9.77e-49!32;UBERON:0002020!1.33e-48!34;UBERON:0003528!1.33e-48!34;UBERON:0001893!1.59e-48!34;UBERON:0002791!1.84e-46!33;UBERON:0002616!2.67e-46!59;UBERON:0000956!4.75e-40!25;UBERON:0000203!4.75e-40!25;UBERON:0001950!1.88e-39!20;UBERON:0003075!3.92e-39!86;UBERON:0007284!3.92e-39!86;UBERON:0002619!4.17e-39!22;UBERON:0002346!1.62e-38!90;UBERON:0003056!8.92e-33!61;UBERON:0007023!1.08e-28!115;UBERON:0000924!2.15e-25!173;UBERON:0006601!2.15e-25!173;UBERON:0004121!2.76e-25!169;UBERON:0000033!1.37e-24!123;UBERON:0000153!7.84e-23!129;UBERON:0007811!7.84e-23!129;UBERON:0001737!2.55e-17!9;UBERON:0000200!8.89e-14!6;UBERON:0001871!7.53e-13!7;UBERON:0002021!2.68e-12!5;UBERON:0001872!1.45e-11!5;UBERON:0000025!2.03e-11!194;UBERON:0000064!4.07e-11!219;UBERON:0002308!3.61e-10!9;UBERON:0000125!3.61e-10!9;UBERON:0002420!4.50e-10!9;UBERON:0007245!4.50e-10!9;UBERON:0010009!4.50e-10!9;UBERON:0010011!4.50e-10!9;UBERON:0000454!4.50e-10!9;UBERON:0000477!4.94e-10!286;UBERON:0003076!1.30e-09!15;UBERON:0003057!1.30e-09!15;UBERON:0002298!5.78e-09!8;UBERON:0000369!2.15e-08!4;UBERON:0002435!2.15e-08!4;UBERON:0000204!2.15e-08!4;UBERON:0010082!2.15e-08!4;UBERON:0004111!6.85e-08!241;UBERON:0000922!7.97e-08!612;UBERON:0002771!1.27e-07!3;UBERON:0000062!2.30e-07!511;UBERON:0000988!2.45e-07!3;UBERON:0001557!3.49e-07!19;UBERON:0000349!5.64e-07!5;UBERON:0009663!6.62e-07!7;UBERON:0002240!9.13e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;9.20e-60;22!UBERON:0001950;1.02e-59;20!UBERON:0000956;3.06e-52;25!UBERON:0000203;3.06e-52;25!UBERON:0001869;3.24e-43;32!UBERON:0003528;2.30e-42;34!UBERON:0002020;2.30e-42;34!UBERON:0001893;1.23e-39;34!UBERON:0002791;1.14e-38;32!UBERON:0001737;1.88e-28;9!UBERON:0001557;1.88e-28;9!UBERON:0002780;2.34e-27;41!UBERON:0001890;2.34e-27;41!UBERON:0000073;3.31e-25;53!UBERON:0002616;3.31e-25;53!UBERON:0000200;3.49e-22;6!UBERON:0002021;1.27e-19;5!UBERON:0000955;3.93e-19;68!UBERON:0001017;3.94e-19;75!UBERON:0001872;2.56e-18;5!UBERON:0001016;3.51e-15;83!UBERON:0002298;2.46e-14;6!UBERON:0001871;1.22e-12;6!UBERON:0001870;2.94e-12;3!UBERON:0000988;2.19e-11;3!UBERON:0002702;9.93e-09;2!UBERON:0002771;1.93e-08;2!UBERON:0002148;7.37e-08;2!UBERON:0006331;7.37e-08;2!UBERON:0009662;7.37e-08;2!UBERON:0000072;4.26e-07;37!UBERON:0004733;5.16e-07;12!UBERON:0002028;5.16e-07;12!UBERON:0011216;6.02e-07;132 | |||
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|short_description=p1@KCNH5 | |||
}} |
Revision as of 05:04, 11 September 2013
Short description: | p1@KCNH5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_KCNH5_5end |
Coexpression cluster: | C3442_amniotic_epitheloid_occipital_brain_retina_frontal_medial |
Association with transcript: | 0bp_to_ENST00000322893_5end |
EntrezGene: | KCNH5 |
HGNC: | 6254 |
UniProt: | Q8NCM2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.