FFCP PHASE1:Hg19::chr14:50065376..50065425,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=122769|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=19742|TSSclassifier=S|UniProt=Q96L50,A8MSW2,Q6AWA7|association_with_transcript=0bp_to_ENST00000298288,ENST00000361579,NM_152329,NM_203467,NR_037792,NR_037793,uc001wwn.2,uc001wwo.2,uc001wwp.2,uc010ank.2_5end|description=CAGE_peak_3_at_LRR1_5end|id=chr14:50065376..50065425,+|ontology_enrichment_celltype=CL:0000037!1.01e-09!172;CL:0000566!1.01e-09!172;CL:0000988!2.11e-09!182;CL:0000063!6.42e-09!578;CL:0000012!8.20e-09!682;CL:0000548!1.36e-08!679;CL:0000004!1.36e-08!679;CL:0000255!1.36e-08!679;CL:0002032!2.43e-08!165;CL:0000837!2.43e-08!165;CL:0000003!2.70e-07!722;CL:0002031!7.59e-07!124|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=CL:0000037,1.70e-10,168;CL:0000988,1.97e-10,177;CL:0002032,5.59e-09,161;CL:0000837,5.59e-09,161|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:162!7.35e-16!235;DOID:14566!1.74e-15!239;DOID:305!4.02e-10!106;DOID:0050687!1.70e-08!143;DOID:0050686!4.52e-08!137;DOID:2531!4.61e-08!51;DOID:0060083!4.61e-08!51|ontology_enrichment_disease_v019=DOID:2531;6.34e-07;51!DOID:0060083;6.34e-07;51|ontology_enrichment_disease_v019_2=DOID:162,2.39e-13,235;DOID:14566,5.51e-13,239;DOID:2531,1.63e-11,51;DOID:0060083,1.63e-11,51;DOID:305,4.87e-10,106;DOID:0050686,1.18e-08,137;DOID:1240,8.74e-08,39|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.46e-07,9|phase1_expression=0.54503513781167,0.428201047781966,0.704772020479856,1.0007329835313,2.23480547213644,0,0,1.26343974685366,0,1.47440361900905,1.39560233594486,0.436882744260345,0,0.123766352960047,0,1.34465029290355,0,0.730310090387373,0.975865597581014,0.61560529038394,0.816002764977012,0,0,1.09499540058307,0.125542639594803,0.840547463227464,1.06730766284929,0.865818594450472,1.96682138424452,1.15148819429164,1.39334510984468,1.83884244895785,0.6024118375565,1.47901604066715,1.85921281392724,1.42169232487422,1.76160263600908,1.10799081706375,1.00272223735071,0.217010870715852,0,0,0.257575567634187,0.872389432677388,0.755751887377619,0.970336244751265,0.232429036905685,0.411167888021826,0.619412741790207,2.01384674625505,0.512321413058201,1.89185783910868,0.689491361473237,1.29096936716765,0,1.31769637679823,0.545812300115692,0.898893937780338,0.918251677112708,0.320929027076094,1.27867425159808,1.64925650093358,1.59570926097305,1.27867425159808,0,0,0,2.76373531782418,1.0429658368404,3.04064382587163,0,0.368277635987565,0.949387162322653,1.05627643155971,0.425208599930087,0.838634582033504,0.336985893439485,0.750884464207532,0.964353520182481,1.42506371870624,0.19891667719909,0.730656615058536,0,0.546138611262131,0,0,0.400395987036012,0,0,0,2.84606484554724,3.52342313622563,3.44045905312706,0,2.24203425192614,0.790152254325231,2.16380747125216,1.96505381374582,3.08402248499264,0.334372990781356,0,0,0,1.00269411196656,0.883817722424512,0.886135578334485,0.541607727530031,0.768547918354051,0.650296737799391,1.15106533222573,1.38175008892924,0.869409257205157,0.741432815810302,0,2.09071047609954,1.24640276967323,1.14966148080576,0.68725489096526,1.01207876807801,0,0,0,0.451725357233318,0.255973222308837,0,0,0.821127996921047,3.02410114837099,2.13952156626806,1.44824403882799,0,0.670700859703636,0.383587685530591,0.361439152384566,0,0.289693037921647,0,0.486634870302636,0.378139268656271,0,0.87834785693126,1.44076983047484,0,0,0.324547393654683,1.56716763569341,0.531831842075461,4.05434061319081,1.14398982156026,3.71457501329565,0.993812036833525,0.860234595106124,0.347140501607594,0.56530794192401,0.838998872419812,0.550236083880135,0.626984899610432,0.258416759169329,0.35576626268671,0.33472061276467,1.20848795132744,0,0.732186172644509,0.735326160691737,0,0.446498641420399,0.22452937262617,0.675668882899933,0,2.84779697870439,0.366403487860815,0,0,0.436094052142534,0,0.506522046658319,0.397227542439656,0.286836620748814,1.06400514659507,0,0,0.49333509683432,0.622422070799533,0.404132016209064,0.163461903113459,0.302714855289863,0.576175924479999,0.234321431833797,0.624320153660641,0,0.747243402759005,0.469737994575059,0.809364721840658,0.561803226808994,0.204154171254893,0.245668634623536,0.206651562351531,0,0,0,1.43723628363248,0.168336113954066,0.500474079487857,0,0,0.30648779579902,0.45071417671979,0.794025282120147,0.538168907066586,0,0.211931901159562,1.80054657650641,0.309157587715317,1.03056216018252,0,0,0.0974370051611986,1.00973509697646,0.368199594569197,0.484938170456436,0.355009592516614,0.503760491138201,0.847802961552438,0.966304265816484,0.818238361772504,0.573609190778008,0.365921118388786,0.662648841607426,0.232387885739037,0.207322110030741,1.00928340350251,1.45990943630332,0,0,0,0,1.44375896333917,2.01121560067735,2.36018566109342,3.37415441836875,2.86764329104224,0.871517776369625,1.89816495288877,1.75280700608214,1.76599318612811,1.92373578473195,0,0,0,0,0,0,0.590789906681404,3.97316789473185,0.7379306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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=122769 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19742 | |||
|TSSclassifier=S | |||
|UniProt=Q96L50,A8MSW2,Q6AWA7 | |||
|association_with_transcript=0bp_to_ENST00000298288,ENST00000361579,NM_152329,NM_203467,NR_037792,NR_037793,uc001wwn.2,uc001wwo.2,uc001wwp.2,uc010ank.2_5end | |||
|description=CAGE_peak_3_at_LRR1_5end | |||
|id=chr14:50065376..50065425,+ | |||
|ontology_enrichment_celltype=CL:0000037!1.01e-09!172;CL:0000566!1.01e-09!172;CL:0000988!2.11e-09!182;CL:0000063!6.42e-09!578;CL:0000012!8.20e-09!682;CL:0000548!1.36e-08!679;CL:0000004!1.36e-08!679;CL:0000255!1.36e-08!679;CL:0002032!2.43e-08!165;CL:0000837!2.43e-08!165;CL:0000003!2.70e-07!722;CL:0002031!7.59e-07!124 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.70e-10,168;CL:0000988,1.97e-10,177;CL:0002032,5.59e-09,161;CL:0000837,5.59e-09,161 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!7.35e-16!235;DOID:14566!1.74e-15!239;DOID:305!4.02e-10!106;DOID:0050687!1.70e-08!143;DOID:0050686!4.52e-08!137;DOID:2531!4.61e-08!51;DOID:0060083!4.61e-08!51 | |||
|ontology_enrichment_disease_v019=DOID:2531;6.34e-07;51!DOID:0060083;6.34e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:162,2.39e-13,235;DOID:14566,5.51e-13,239;DOID:2531,1.63e-11,51;DOID:0060083,1.63e-11,51;DOID:305,4.87e-10,106;DOID:0050686,1.18e-08,137;DOID:1240,8.74e-08,39 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.46e-07,9 | |||
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| |||
|short_description=p3@LRR1 | |||
}} |
Revision as of 04:35, 11 September 2013
Short description: | p3@LRR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_LRR1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000298288, ENST00000361579, NM_152329, NM_203467, NR_037792, NR_037793, uc001wwn.2, uc001wwo.2, uc001wwp.2, uc010ank.2_5end |
EntrezGene: | LRR1 |
HGNC: | 19742 |
UniProt: | Q96L50A8MSW2Q6AWA7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 1.70e-10 | 168 |
hematopoietic cell | 1.97e-10 | 177 |
hematopoietic oligopotent progenitor cell | 5.59e-09 | 161 |
hematopoietic multipotent progenitor cell | 5.59e-09 | 161 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.46e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
cancer | 2.39e-13 | 235 |
disease of cellular proliferation | 5.51e-13 | 239 |
hematologic cancer | 1.63e-11 | 51 |
immune system cancer | 1.63e-11 | 51 |
carcinoma | 4.87e-10 | 106 |
organ system cancer | 1.18e-08 | 137 |
leukemia | 8.74e-08 | 39 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.