FFCP PHASE1:Hg19::chr13:44947820..44947835,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=387923|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=20607|TSSclassifier=S|UniProt=F2Z2S5|association_with_transcript=19bp_to_ENST00000474333_5end|coexpression_cluster_id=C1|description=CAGE_peak_3_at_SERP2_5end|id=chr13:44947820..44947835,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000346;7.64e-11;3!CL:1000428;7.64e-11;3!CL:0002559;7.68e-07;5|ontology_enrichment_celltype_v019_2=CL:0000346,7.30e-11,3;CL:1000428,7.30e-11,3;CL:0002559,7.48e-07,5|ontology_enrichment_development_v019=UBERON:0006601;8.55e-09;82!UBERON:0006222;9.34e-09;1!UBERON:0005425;9.34e-09;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.91e-37!115;UBERON:0001893!6.30e-35!34;UBERON:0002020!1.63e-34!34;UBERON:0003528!1.63e-34!34;UBERON:0002780!4.43e-34!41;UBERON:0001890!4.43e-34!41;UBERON:0006240!4.43e-34!41;UBERON:0001049!5.64e-34!57;UBERON:0005068!5.64e-34!57;UBERON:0006241!5.64e-34!57;UBERON:0007135!5.64e-34!57;UBERON:0002791!1.86e-33!33;UBERON:0003080!5.09e-33!42;UBERON:0001869!1.43e-32!32;UBERON:0002616!1.74e-30!59;UBERON:0005743!9.58e-29!86;UBERON:0001017!5.30e-28!82;UBERON:0000073!2.25e-27!94;UBERON:0001016!2.25e-27!94;UBERON:0000955!3.02e-27!69;UBERON:0006238!3.02e-27!69;UBERON:0002619!1.11e-26!22;UBERON:0000956!6.43e-25!25;UBERON:0000203!6.43e-25!25;UBERON:0001950!4.78e-24!20;UBERON:0003056!3.02e-22!61;UBERON:0003075!5.90e-22!86;UBERON:0007284!5.90e-22!86;UBERON:0002346!2.15e-20!90;UBERON:0000033!1.69e-16!123;UBERON:0000153!4.34e-15!129;UBERON:0007811!4.34e-15!129;UBERON:0004121!1.35e-14!169;UBERON:0000924!6.76e-14!173;UBERON:0006601!6.76e-14!173;UBERON:0002420!6.63e-12!9;UBERON:0007245!6.63e-12!9;UBERON:0010009!6.63e-12!9;UBERON:0010011!6.63e-12!9;UBERON:0000454!6.63e-12!9;UBERON:0002308!5.49e-11!9;UBERON:0000125!5.49e-11!9;UBERON:0000200!6.47e-11!6;UBERON:0001871!1.26e-10!7;UBERON:0000064!4.82e-10!219;UBERON:0000062!6.84e-09!511;UBERON:0009663!6.95e-09!7;UBERON:0000349!7.45e-09!5;UBERON:0000369!7.73e-08!4;UBERON:0002435!7.73e-08!4;UBERON:0000204!7.73e-08!4;UBERON:0010082!7.73e-08!4;UBERON:0000025!2.28e-07!194|ontology_enrichment_uberon_v019=UBERON:0001869;6.81e-45;32!UBERON:0002791;2.74e-42;32!UBERON:0001893;2.06e-41;34!UBERON:0001950;1.56e-40;20!UBERON:0003528;8.27e-39;34!UBERON:0002020;8.27e-39;34!UBERON:0002619;7.46e-37;22!UBERON:0000956;2.16e-32;25!UBERON:0000203;2.16e-32;25!UBERON:0000200;1.17e-30;6!UBERON:0002780;5.72e-29;41!UBERON:0001890;5.72e-29;41!UBERON:0002021;6.72e-24;5!UBERON:0002420;2.01e-20;9!UBERON:0007245;2.01e-20;9!UBERON:0010009;2.01e-20;9!UBERON:0010011;2.01e-20;9!UBERON:0000454;2.01e-20;9!UBERON:0000955;7.50e-20;68!UBERON:0000073;7.68e-20;53!UBERON:0002616;7.68e-20;53!UBERON:0001017;1.31e-17;75!UBERON:0000369;2.93e-17;4!UBERON:0002435;2.93e-17;4!UBERON:0000204;2.93e-17;4!UBERON:0001871;3.80e-17;6!UBERON:0009663;3.80e-17;7!UBERON:0002771;8.44e-16;2!UBERON:0002702;8.44e-16;2!UBERON:0000125;2.20e-13;9!UBERON:0002308;2.20e-13;9!UBERON:0007023;8.76e-12;114!UBERON:0001016;2.92e-11;83!UBERON:0001870;7.64e-11;3!UBERON:0000412;7.64e-11;3!UBERON:0001992;7.64e-11;3!UBERON:0005383;7.64e-11;3!UBERON:0005382;7.64e-11;3!UBERON:0002902;9.34e-09;1!UBERON:0001882;9.34e-09;1!UBERON:0001874;9.34e-09;1!UBERON:0000941;9.34e-09;1!UBERON:0001785;9.34e-09;1!UBERON:0002464;9.34e-09;1!UBERON:0004904;9.34e-09;1!UBERON:0001021;9.34e-09;1!UBERON:0009899;9.34e-09;1!UBERON:0007190;9.34e-09;1!UBERON:0005403;9.34e-09;1!UBERON:0002073;7.68e-07;5!UBERON:0000349;7.68e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0001869,3.91e-54,32;UBERON:0001893,7.07e-51,34;UBERON:0002791,1.35e-47,32;UBERON:0002780,1.67e-47,41;UBERON:0001890,1.67e-47,41;UBERON:0003080,1.67e-47,41;UBERON:0006240,1.67e-47,41;UBERON:0003528,1.01e-44,34;UBERON:0002020,1.01e-44,34;UBERON:0001950,7.17e-41,20;UBERON:0002619,3.69e-37,22;UBERON:0000073,2.92e-36,53;UBERON:0002616,2.92e-36,53;UBERON:0003056,3.58e-35,61;UBERON:0000955,1.29e-34,68;UBERON:0006238,1.29e-34,68;UBERON:0001049,3.45e-34,56;UBERON:0005068,3.45e-34,56;UBERON:0006241,3.45e-34,56;UBERON:0007135,3.45e-34,56;UBERON:0000956,1.16e-32,25;UBERON:0000203,1.16e-32,25;UBERON:0001017,6.43e-32,81;UBERON:0001016,1.30e-31,89;UBERON:0000200,2.14e-30,6;UBERON:0003075,1.95e-25,82;UBERON:0007284,1.95e-25,82;UBERON:0007023,5.31e-25,114;UBERON:0010371,1.84e-24,104;UBERON:0002021,2.78e-24,5;UBERON:0002346,4.10e-24,86;UBERON:0002420,1.50e-20,9;UBERON:0007245,1.50e-20,9;UBERON:0010009,1.50e-20,9;UBERON:0010011,1.50e-20,9;UBERON:0000454,1.50e-20,9;UBERON:0010314,1.53e-18,132;UBERON:0004121,1.78e-18,171;UBERON:0000924,1.78e-18,171;UBERON:0006601,1.78e-18,171;UBERON:0000369,2.57e-17,4;UBERON:0002435,2.57e-17,4;UBERON:0000204,2.57e-17,4;UBERON:0010082,2.57e-17,4;UBERON:0001871,2.85e-17,6;UBERON:0009663,4.53e-17,7;UBERON:0002702,6.78e-16,2;UBERON:0002771,9.16e-16,2;UBERON:0000125,2.52e-13,9;UBERON:0002308,2.52e-13,9;UBERON:0005383,4.00e-11,3;UBERON:0005382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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=387923 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20607 | |||
|TSSclassifier=S | |||
|UniProt=F2Z2S5 | |||
|association_with_transcript=19bp_to_ENST00000474333_5end | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_3_at_SERP2_5end | |||
|id=chr13:44947820..44947835,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000346;7.64e-11;3!CL:1000428;7.64e-11;3!CL:0002559;7.68e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000346,7.30e-11,3;CL:1000428,7.30e-11,3;CL:0002559,7.48e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0006601;8.55e-09;82!UBERON:0006222;9.34e-09;1!UBERON:0005425;9.34e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.91e-37!115;UBERON:0001893!6.30e-35!34;UBERON:0002020!1.63e-34!34;UBERON:0003528!1.63e-34!34;UBERON:0002780!4.43e-34!41;UBERON:0001890!4.43e-34!41;UBERON:0006240!4.43e-34!41;UBERON:0001049!5.64e-34!57;UBERON:0005068!5.64e-34!57;UBERON:0006241!5.64e-34!57;UBERON:0007135!5.64e-34!57;UBERON:0002791!1.86e-33!33;UBERON:0003080!5.09e-33!42;UBERON:0001869!1.43e-32!32;UBERON:0002616!1.74e-30!59;UBERON:0005743!9.58e-29!86;UBERON:0001017!5.30e-28!82;UBERON:0000073!2.25e-27!94;UBERON:0001016!2.25e-27!94;UBERON:0000955!3.02e-27!69;UBERON:0006238!3.02e-27!69;UBERON:0002619!1.11e-26!22;UBERON:0000956!6.43e-25!25;UBERON:0000203!6.43e-25!25;UBERON:0001950!4.78e-24!20;UBERON:0003056!3.02e-22!61;UBERON:0003075!5.90e-22!86;UBERON:0007284!5.90e-22!86;UBERON:0002346!2.15e-20!90;UBERON:0000033!1.69e-16!123;UBERON:0000153!4.34e-15!129;UBERON:0007811!4.34e-15!129;UBERON:0004121!1.35e-14!169;UBERON:0000924!6.76e-14!173;UBERON:0006601!6.76e-14!173;UBERON:0002420!6.63e-12!9;UBERON:0007245!6.63e-12!9;UBERON:0010009!6.63e-12!9;UBERON:0010011!6.63e-12!9;UBERON:0000454!6.63e-12!9;UBERON:0002308!5.49e-11!9;UBERON:0000125!5.49e-11!9;UBERON:0000200!6.47e-11!6;UBERON:0001871!1.26e-10!7;UBERON:0000064!4.82e-10!219;UBERON:0000062!6.84e-09!511;UBERON:0009663!6.95e-09!7;UBERON:0000349!7.45e-09!5;UBERON:0000369!7.73e-08!4;UBERON:0002435!7.73e-08!4;UBERON:0000204!7.73e-08!4;UBERON:0010082!7.73e-08!4;UBERON:0000025!2.28e-07!194 | |||
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|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,5.10818394441079,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.12663051166458,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0.122834317311768,0,0,0,0,0,0,0,0.277064115484183,0,0.30648779579902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56449532329816,0,1.38134921352481,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0,0,0,0.234282829985426,0.300946099727719,0,1.03473071292505,0,0,0.260650843404249,0.195801157462741,0,0,0,0,0.303127571446259,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0.164254312027618,0.519254429183621,0,0,0,0,0.114814448164607,0.182091168006717,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0.501689773854853,0,0,0,0,0,0,0.328014645699706,0,0.206082023295445,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0.274537029736055,0.117812402345686,0.202182481573316,0,0.421258456238981,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0.0941438007767792,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9882952955326,0.844016498463076,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0.0986434056369336,0,0,1.93866549219044,1.48428957058962,0,0,0,0,0,0,0,0,0,0,0.885741385813839,1.68835014075571,0,0.884634079449797,0,1.09692698576986,0.10893846351899,0,0.0769502585037971,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0.202203398942031,0,1.40558667435203,0,0,0,0,0,0.61214552326098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0.949661939338181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,0,0,0,0,0,0,0,0.399358000997982,0.429226048136571,0.446342914883745,0.201550417460179,0,0,0,0,0,0,0,0.795229689809303,0.272406812223151,0.160753148465019,0,0,0,0,0.546746009922222,0,0.157611414598396,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.13223260174269,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,1.77213635993397,1.83039397352945,1.3771002377715,0,0.221858103073705,0.434674820589684,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0.457680136793847,0,0,0,0,0.449803112163605,0.155262956876259,0,0.265841714557995,0,0,0.380805212168795,0,0.181848659202559,0.107410557042488,0.464033759878494,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10606748921385,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0,0,1.02766760154335,0,1.91560630868582,1.8460472781668,1.26035848110859,1.59061680667701,0.645902582527404,1.42769420259154,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,1.01306376927592,0.781078098613847,0.620060389503552,1.26831620387814,0,0,0,0,0,0,0.336283722218824,0,0,0.0887023701626388,0,0,0.475788130837822,0.986591603442736,0,0,0.156986185701028,1.88538707899202,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0.154348316215889,0.218559560503957,0,0,0,0.392616934229891,0,0,0,0,0,0,0,0,0,0,0,0.286679166302903,0,1.35982980381829,0.436350690340377,0,0,0,0,0,0,0.126698501011437,0,0,0,0,7.57786982182394,17.1497043299954,0,0.20686599172379,0,0,0,0,0.224263725161227,0.0636471582781649,0,0,0,0.0673520530145875,0.0717222053926763,0,0,0.106727345877715,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p3@SERP2 | |||
}} |
Revision as of 02:18, 11 September 2013
Short description: | p3@SERP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_SERP2_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 19bp_to_ENST00000474333_5end |
EntrezGene: | SERP2 |
HGNC: | 20607 |
UniProt: | F2Z2S5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle dermal papilla cell | 7.30e-11 | 3 |
stem cell of epidermis | 7.30e-11 | 3 |
hair follicle cell | 7.48e-07 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.