FFCP PHASE1:Hg19::chr13:23734194..23734204,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C38|description=CAGE_peak_at_chr13:23734194..23734204,+|id=chr13:23734194..23734204,+|ontology_enrichment_celltype=CL:0002580!2.18e-07!3|ontology_enrichment_celltype_v019=CL:0000123;1.17e-17;2!CL:0000242;1.17e-17;2!CL:0000333;6.55e-08;5!CL:0000312;7.25e-08;5!CL:0000138;7.17e-07;6!CL:0000240;9.23e-07;6!CL:0000311;9.23e-07;6!CL:0000079;9.23e-07;6!CL:0000237;9.23e-07;6|ontology_enrichment_celltype_v019_2=CL:0000242,1.07e-17,2;CL:0000312,7.01e-08,5;CL:0000058,7.17e-07,6;CL:0000138,7.17e-07,6;CL:0000240,8.97e-07,6;CL:0000311,8.97e-07,6;CL:0000079,8.97e-07,6;CL:0000237,8.97e-07,6;CL:0000036,8.97e-07,6;CL:0000357,8.97e-07,6;CL:0000114,8.97e-07,6|ontology_enrichment_development_v019=CL:0000357;9.23e-07;6!CL:0000114;9.23e-07;6|ontology_enrichment_disease=DOID:3095!9.73e-10!22;DOID:2994!9.73e-10!22|ontology_enrichment_disease_v019=DOID:3371;1.84e-34;1!DOID:4549;1.84e-34;1!DOID:5861;1.84e-34;1!DOID:6496;1.84e-34;1!DOID:5093;5.98e-34;4!DOID:1612;5.98e-34;4!DOID:3095;5.82e-07;22!DOID:2994;5.82e-07;22!DOID:201;7.17e-07;6!DOID:0060100;7.17e-07;6!DOID:169;8.48e-07;6|ontology_enrichment_disease_v019_2=DOID:3371,1.84e-34,1;DOID:4549,1.84e-34,1;DOID:5861,1.84e-34,1;DOID:6496,1.84e-34,1;DOID:5093,5.98e-34,4;DOID:1612,5.98e-34,4;DOID:0050687,1.02e-08,143;DOID:3095,5.91e-07,22;DOID:2994,5.91e-07,22;DOID:201,7.17e-07,6;DOID:0060100,7.17e-07,6;DOID:169,8.48e-07,6|ontology_enrichment_uberon=UBERON:0000310!3.96e-08!10;UBERON:0001443!2.17e-07!11|ontology_enrichment_uberon_v019=UBERON:0000310;2.84e-14;10!UBERON:0001443;4.52e-13;11!UBERON:0002418;1.85e-12;3!UBERON:0004755;1.85e-12;3!UBERON:0000013;6.55e-08;5!UBERON:0002410;6.55e-08;5|ontology_enrichment_uberon_v019_2=UBERON:0000310,2.84e-14,10;UBERON:0001443,4.52e-13,11;UBERON:0002418,1.85e-12,3;UBERON:0004755,1.85e-12,3;UBERON:0000013,6.55e-08,5;UBERON:0002410,6.55e-08,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.436882744260345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.822335776043652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,3.43394464837949,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.907170879989041,0.248107807818777,0.306923946576125,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.38556089410803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586993856796269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.29607590900102,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0,0,0,0,0,0,0,0,0,1.87333962322753,0,0,0.233713309847224,0,0,0,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0,0,0,0.322231671127465,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419638523158333,0,0.255788742607303,0,2.67352101155024,0,0,0,0.247871528518004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235939446695481,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0.436350690340377,0,0,0,0,0,0.109265571963696,0,0,1.3360870263278,0.0918948995348449,0.250707539292375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr13:23734194..23734204,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C38 | |||
|description=CAGE_peak_at_chr13:23734194..23734204,+ | |||
|id=chr13:23734194..23734204,+ | |||
|ontology_enrichment_celltype=CL:0002580!2.18e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000123;1.17e-17;2!CL:0000242;1.17e-17;2!CL:0000333;6.55e-08;5!CL:0000312;7.25e-08;5!CL:0000138;7.17e-07;6!CL:0000240;9.23e-07;6!CL:0000311;9.23e-07;6!CL:0000079;9.23e-07;6!CL:0000237;9.23e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,1.07e-17,2;CL:0000312,7.01e-08,5;CL:0000058,7.17e-07,6;CL:0000138,7.17e-07,6;CL:0000240,8.97e-07,6;CL:0000311,8.97e-07,6;CL:0000079,8.97e-07,6;CL:0000237,8.97e-07,6;CL:0000036,8.97e-07,6;CL:0000357,8.97e-07,6;CL:0000114,8.97e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000357;9.23e-07;6!CL:0000114;9.23e-07;6 | |||
|ontology_enrichment_disease=DOID:3095!9.73e-10!22;DOID:2994!9.73e-10!22 | |||
|ontology_enrichment_disease_v019=DOID:3371;1.84e-34;1!DOID:4549;1.84e-34;1!DOID:5861;1.84e-34;1!DOID:6496;1.84e-34;1!DOID:5093;5.98e-34;4!DOID:1612;5.98e-34;4!DOID:3095;5.82e-07;22!DOID:2994;5.82e-07;22!DOID:201;7.17e-07;6!DOID:0060100;7.17e-07;6!DOID:169;8.48e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,1.84e-34,1;DOID:4549,1.84e-34,1;DOID:5861,1.84e-34,1;DOID:6496,1.84e-34,1;DOID:5093,5.98e-34,4;DOID:1612,5.98e-34,4;DOID:0050687,1.02e-08,143;DOID:3095,5.91e-07,22;DOID:2994,5.91e-07,22;DOID:201,7.17e-07,6;DOID:0060100,7.17e-07,6;DOID:169,8.48e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0000310!3.96e-08!10;UBERON:0001443!2.17e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0000310;2.84e-14;10!UBERON:0001443;4.52e-13;11!UBERON:0002418;1.85e-12;3!UBERON:0004755;1.85e-12;3!UBERON:0000013;6.55e-08;5!UBERON:0002410;6.55e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000310,2.84e-14,10;UBERON:0001443,4.52e-13,11;UBERON:0002418,1.85e-12,3;UBERON:0004755,1.85e-12,3;UBERON:0000013,6.55e-08,5;UBERON:0002410,6.55e-08,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.436882744260345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.822335776043652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,3.43394464837949,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.907170879989041,0.248107807818777,0.306923946576125,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.38556089410803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586993856796269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.29607590900102,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0,0,0,0,0,0,0,0,0,1.87333962322753,0,0,0.233713309847224,0,0,0,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0,0,0,0.322231671127465,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419638523158333,0,0.255788742607303,0,2.67352101155024,0,0,0,0.247871528518004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235939446695481,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0.436350690340377,0,0,0,0,0,0.109265571963696,0,0,1.3360870263278,0.0918948995348449,0.250707539292375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr13:23734194..23734204,+ | |||
}} |
Revision as of 01:46, 11 September 2013
Short description: | p@chr13:23734194..23734204, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:23734194..23734204, + |
Coexpression cluster: | C38_extraskeletal_rhabdomyosarcoma_adrenal_rectal_mesothelioma_lung_Wilms |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 1.07e-17 | 2 |
keratinocyte | 7.01e-08 | 5 |
chondroblast | 7.17e-07 | 6 |
chondrocyte | 7.17e-07 | 6 |
stratified squamous epithelial cell | 8.97e-07 | 6 |
keratin accumulating cell | 8.97e-07 | 6 |
stratified epithelial cell | 8.97e-07 | 6 |
keratinizing barrier epithelial cell | 8.97e-07 | 6 |
epithelial fate stem cell | 8.97e-07 | 6 |
stratified epithelial stem cell | 8.97e-07 | 6 |
surface ectodermal cell | 8.97e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
breast | 2.84e-14 | 10 |
chest | 4.52e-13 | 11 |
cartilage tissue | 1.85e-12 | 3 |
skeletal tissue | 1.85e-12 | 3 |
sympathetic nervous system | 6.55e-08 | 5 |
autonomic nervous system | 6.55e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 1.84e-34 | 1 |
extraosseous chondrosarcoma | 1.84e-34 | 1 |
myxoid chondrosarcoma | 1.84e-34 | 1 |
extraskeletal myxoid chondrosarcoma | 1.84e-34 | 1 |
thoracic cancer | 5.98e-34 | 4 |
breast cancer | 5.98e-34 | 4 |
cell type cancer | 1.02e-08 | 143 |
germ cell and embryonal cancer | 5.91e-07 | 22 |
germ cell cancer | 5.91e-07 | 22 |
connective tissue cancer | 7.17e-07 | 6 |
musculoskeletal system cancer | 7.17e-07 | 6 |
neuroendocrine tumor | 8.48e-07 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.