FFCP PHASE1:Hg19::chr13:114487620..114487623,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C461|description=CAGE_peak_at_chr13:114487620..114487623,-|id=chr13:114487620..114487623,-|ontology_enrichment_celltype=CL:0000243!1.47e-08!15;CL:0000125!1.47e-08!15;CL:0000030!1.47e-08!15;CL:0000339!1.47e-08!15;CL:0000095!1.49e-07!17;CL:0000123!1.49e-07!17;CL:0000066!2.08e-07!254|ontology_enrichment_celltype_v019=CL:1001319;4.66e-21;1!CL:1000600;4.66e-21;1|ontology_enrichment_celltype_v019_2=CL:1001319,2.30e-21,1;CL:1000600,2.30e-21,1|ontology_enrichment_development_v019=UBERON:0008814;1.82e-11;2!UBERON:0010056;1.82e-11;2!UBERON:0009847;6.56e-08;3!UBERON:0003353;6.56e-08;3|ontology_enrichment_disease=DOID:1749!3.90e-11!14;DOID:305!6.89e-11!106;DOID:14566!1.31e-10!239;DOID:0050687!3.41e-10!143;DOID:162!2.26e-09!235|ontology_enrichment_disease_v019=DOID:1749;1.82e-13;14!DOID:4929;3.18e-11;2|ontology_enrichment_disease_v019_2=DOID:1749,1.67e-13,14;DOID:4929,2.73e-11,2;DOID:305,5.67e-09,106|ontology_enrichment_uberon=UBERON:0000344!1.07e-16!12;UBERON:0003343!1.35e-13!4;UBERON:0004785!1.35e-13!4;UBERON:0003729!6.91e-11!5;UBERON:0002394!4.18e-08!4;UBERON:0003928!4.18e-08!4;UBERON:0002294!5.70e-08!7;UBERON:0001173!5.70e-08!7;UBERON:0004912!5.70e-08!7;UBERON:0000058!7.98e-07!26|ontology_enrichment_uberon_v019=UBERON:0004645;4.66e-21;1!UBERON:0004913;4.66e-21;1!UBERON:0003703;4.66e-21;1!UBERON:0001256;4.66e-21;1!UBERON:0001259;4.66e-21;1!UBERON:0001174;4.66e-21;1!UBERON:0004914;4.66e-21;1!UBERON:0001255;3.18e-11;2!UBERON:0001556;3.18e-11;2!UBERON:0001723;4.52e-08;3!UBERON:0001033;4.52e-08;3!UBERON:0002114;6.56e-08;2|ontology_enrichment_uberon_v019_2=UBERON:0004645,2.30e-21,1;UBERON:0001256,2.30e-21,1;UBERON:0001259,2.30e-21,1;UBERON:0004913,3.45e-21,1;UBERON:0003703,3.45e-21,1;UBERON:0001174,3.45e-21,1;UBERON:0004914,3.45e-21,1;UBERON:0001255,2.23e-11,2;UBERON:0001556,2.23e-11,2;UBERON:0001723,4.52e-08,3;UBERON:0001033,4.52e-08,3;UBERON:0010056,4.52e-08,3;UBERON:0002114,5.93e-08,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.716243852959582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0.215915916102139,0,0.270946437543853,0,0.509752546090077,0,0.671624264166535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638063562472921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4098700508785,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.359473404589307,0,0,0,0,0,0,0,0,0,0,0,1.365521379426,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0.189753732724185,0,0,0,0.424059214301822,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0,0.751617097072463,0,0,0,0.627865836814451,0,0,0,0,0,0.609414446062818,0,0,0,0,0,0,0,0,0.959293472527256,0,0,0,0.961905843018405,0,0.19980960958213,0,0,0.171594997861965,2.0167671718341,0.248505071130865,0,0.951329442515298,0.523014231561666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.338693328263138,0,0,0,0,0,0,0,0,0,0,0,0.211200673038813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91502377331055,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20008329398946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0,0,0,0,0.655219697692825,0,0.633936370075881,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0.235939446695481,0.183428598521679,12.1301949457855,0,0,0,0,0,0,0,0,1.47856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0.171488009437418,0,0,0,1.00108261702862,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0.354996002191696,0.596493833314104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299823467774787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224263725161227,0,0,0,0,0,0,0,1.95367844666339,0,0,0,0,0,0,0,0,0|short_description=p@chr13:114487620..114487623,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C461 | |||
|description=CAGE_peak_at_chr13:114487620..114487623,- | |||
|id=chr13:114487620..114487623,- | |||
|ontology_enrichment_celltype=CL:0000243!1.47e-08!15;CL:0000125!1.47e-08!15;CL:0000030!1.47e-08!15;CL:0000339!1.47e-08!15;CL:0000095!1.49e-07!17;CL:0000123!1.49e-07!17;CL:0000066!2.08e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:1001319;4.66e-21;1!CL:1000600;4.66e-21;1 | |||
|ontology_enrichment_celltype_v019_2=CL:1001319,2.30e-21,1;CL:1000600,2.30e-21,1 | |||
|ontology_enrichment_development_v019=UBERON:0008814;1.82e-11;2!UBERON:0010056;1.82e-11;2!UBERON:0009847;6.56e-08;3!UBERON:0003353;6.56e-08;3 | |||
|ontology_enrichment_disease=DOID:1749!3.90e-11!14;DOID:305!6.89e-11!106;DOID:14566!1.31e-10!239;DOID:0050687!3.41e-10!143;DOID:162!2.26e-09!235 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.82e-13;14!DOID:4929;3.18e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.67e-13,14;DOID:4929,2.73e-11,2;DOID:305,5.67e-09,106 | |||
|ontology_enrichment_uberon=UBERON:0000344!1.07e-16!12;UBERON:0003343!1.35e-13!4;UBERON:0004785!1.35e-13!4;UBERON:0003729!6.91e-11!5;UBERON:0002394!4.18e-08!4;UBERON:0003928!4.18e-08!4;UBERON:0002294!5.70e-08!7;UBERON:0001173!5.70e-08!7;UBERON:0004912!5.70e-08!7;UBERON:0000058!7.98e-07!26 | |||
|ontology_enrichment_uberon_v019=UBERON:0004645;4.66e-21;1!UBERON:0004913;4.66e-21;1!UBERON:0003703;4.66e-21;1!UBERON:0001256;4.66e-21;1!UBERON:0001259;4.66e-21;1!UBERON:0001174;4.66e-21;1!UBERON:0004914;4.66e-21;1!UBERON:0001255;3.18e-11;2!UBERON:0001556;3.18e-11;2!UBERON:0001723;4.52e-08;3!UBERON:0001033;4.52e-08;3!UBERON:0002114;6.56e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004645,2.30e-21,1;UBERON:0001256,2.30e-21,1;UBERON:0001259,2.30e-21,1;UBERON:0004913,3.45e-21,1;UBERON:0003703,3.45e-21,1;UBERON:0001174,3.45e-21,1;UBERON:0004914,3.45e-21,1;UBERON:0001255,2.23e-11,2;UBERON:0001556,2.23e-11,2;UBERON:0001723,4.52e-08,3;UBERON:0001033,4.52e-08,3;UBERON:0010056,4.52e-08,3;UBERON:0002114,5.93e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.716243852959582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0.215915916102139,0,0.270946437543853,0,0.509752546090077,0,0.671624264166535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638063562472921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4098700508785,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.359473404589307,0,0,0,0,0,0,0,0,0,0,0,1.365521379426,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0.189753732724185,0,0,0,0.424059214301822,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0,0.751617097072463,0,0,0,0.627865836814451,0,0,0,0,0,0.609414446062818,0,0,0,0,0,0,0,0,0.959293472527256,0,0,0,0.961905843018405,0,0.19980960958213,0,0,0.171594997861965,2.0167671718341,0.248505071130865,0,0.951329442515298,0.523014231561666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.338693328263138,0,0,0,0,0,0,0,0,0,0,0,0.211200673038813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91502377331055,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20008329398946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0,0,0,0,0.655219697692825,0,0.633936370075881,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0.235939446695481,0.183428598521679,12.1301949457855,0,0,0,0,0,0,0,0,1.47856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0.171488009437418,0,0,0,1.00108261702862,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0.354996002191696,0.596493833314104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299823467774787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224263725161227,0,0,0,0,0,0,0,1.95367844666339,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr13:114487620..114487623,- | |||
}} |
Revision as of 01:37, 11 September 2013
Short description: | p@chr13:114487620..114487623, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:114487620..114487623, - |
Coexpression cluster: | C461_oral_chorionic_squamous_amniotic_epidermoid_gall_bronchogenic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bladder cell | 2.30e-21 | 1 |
lower urinary tract cell | 2.30e-21 | 1 |
Ontology term | p-value | n |
---|---|---|
urinary bladder urothelium | 2.30e-21 | 1 |
wall of urinary bladder | 2.30e-21 | 1 |
mucosa of urinary bladder | 2.30e-21 | 1 |
hepatopancreatic ampulla | 3.45e-21 | 1 |
extrahepatic bile duct | 3.45e-21 | 1 |
common bile duct | 3.45e-21 | 1 |
duodenal papilla | 3.45e-21 | 1 |
urinary bladder | 2.23e-11 | 2 |
lower urinary tract | 2.23e-11 | 2 |
tongue | 4.52e-08 | 3 |
gustatory system | 4.52e-08 | 3 |
future tongue | 4.52e-08 | 3 |
duodenum | 5.93e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.67e-13 | 14 |
tubular adenocarcinoma | 2.73e-11 | 2 |
carcinoma | 5.67e-09 | 106 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.