FFCP PHASE1:Hg19::chr13:102142296..102142310,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9358|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6164|TSSclassifier=S|UniProt=B4DQ02|association_with_transcript=0bp_to_ENST00000376162_5end|description=CAGE_peak_16_at_ITGBL1_5end|id=chr13:102142296..102142310,+|ontology_enrichment_celltype=CL:0002139!1.01e-27!24;CL:0000071!2.11e-19!18;CL:0002546!2.11e-19!18;CL:0000115!6.16e-18!35;CL:0000213!5.87e-17!57;CL:0000215!5.87e-17!57;CL:0000076!3.46e-15!62;CL:0002078!1.38e-13!44;CL:0002541!1.62e-12!3;CL:0002618!1.75e-12!3;CL:0002543!1.54e-10!6;CL:0002544!2.45e-10!6;CL:0005020!5.02e-10!6;CL:0002138!5.02e-10!6;CL:0005022!5.02e-10!6;CL:0000222!1.28e-07!119;CL:1000413!6.86e-07!9|ontology_enrichment_celltype_v019=CL:0002139;3.41e-13;24!CL:0002618;1.96e-12;3!CL:0002541;2.74e-12;3!CL:0002144;2.74e-12;3!CL:0000071;2.33e-08;18!CL:0002543;7.37e-07;6!CL:0002138;7.37e-07;6|ontology_enrichment_celltype_v019_2=CL:0002139,3.20e-13,24;CL:0002618,2.07e-12,3;CL:0002144,2.31e-12,3;CL:0002541,3.24e-12,3;CL:0000213,1.02e-09,58;CL:0000215,1.02e-09,58;CL:0000115,4.60e-09,36;CL:0000071,2.25e-08,18;CL:0002546,2.25e-08,18;CL:0002078,2.18e-07,45;CL:0005020,7.17e-07,6;CL:0002138,7.17e-07,6;CL:0005022,7.17e-07,6;CL:0002543,7.58e-07,6|ontology_enrichment_development_v019=CL:0002546;2.33e-08;18!CL:0005022;7.37e-07;6|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001986!2.11e-19!18;UBERON:0004638!2.11e-19!18;UBERON:0004852!2.11e-19!18;UBERON:0000487!1.72e-15!22;UBERON:0006914!2.22e-13!25;UBERON:0000476!1.62e-12!3;UBERON:0000920!1.62e-12!3;UBERON:0002066!2.39e-12!5;UBERON:0000478!2.31e-11!24;UBERON:0002046!3.02e-11!5;UBERON:0004117!3.02e-11!5;UBERON:0007689!3.02e-11!5;UBERON:0007123!3.02e-11!5;UBERON:0003091!3.02e-11!5;UBERON:0001638!2.91e-10!9;UBERON:0003920!2.91e-10!9;UBERON:0004582!2.91e-10!9;UBERON:0000055!5.52e-10!69;UBERON:0001009!2.48e-08!113;UBERON:0002049!2.90e-08!79;UBERON:0007798!2.90e-08!79;UBERON:0004535!1.17e-07!110;UBERON:0001473!1.59e-07!8;UBERON:0004536!1.59e-07!8;UBERON:0006558!1.59e-07!8;UBERON:0003915!6.86e-07!9;UBERON:0004700!6.86e-07!9;UBERON:0001917!6.86e-07!9|ontology_enrichment_uberon_v019=UBERON:0010523;2.74e-12;3!UBERON:0001915;2.74e-12;3!UBERON:0003124;2.74e-12;3!UBERON:0000920;2.74e-12;3!UBERON:0001982;2.74e-12;3!UBERON:0004638;2.33e-08;18!UBERON:0001986;2.33e-08;18!UBERON:0004852;2.33e-08;18!UBERON:0002066;5.54e-08;5!UBERON:0000487;5.24e-07;22|ontology_enrichment_uberon_v019_2=UBERON:0010523,2.31e-12,3;UBERON:0001915,2.31e-12,3;UBERON:0001982,2.31e-12,3;UBERON:0000920,3.24e-12,3;UBERON:0004638,2.25e-08,18;UBERON:0001986,2.25e-08,18;UBERON:0004852,2.25e-08,18;UBERON:0002066,5.73e-08,5;UBERON:0000487,5.09e-07,22|phase1_expression=0,0,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.79504962946682,0,0.347140501607594,0.56530794192401,0,0,0,0.258416759169329,2.13459757612026,0.33472061276467,0.402829317109147,1.52054421143703,0,0.367663080345869,0,2.05389375053383,0.673588117878509,0.450445921933289,0,0,0.366403487860815,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387815147273333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.831883446123229,0,0,0.234282829985426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0,0.307160702099232,0,0,0.111308705022906,0,0,0,0,0,0.613612095012929,0,0,0.539210106883961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.957003479195758,0.457987967009312,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18608451472249,0.370691816839509,0.835375596043643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.435296032902013,0.17472666824203,0,0,0.0730893170861856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406870733204662,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0.463044948647668,0,1.25362188757041,0,0,0,0,0,0,0,0.303859956177382,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0.231051332300676,0,0,0,0,0,0,0,0.327543835020193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0.205325613712494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705789743431384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224263725161227,0.0636471582781649,0,0,0,0,0,0,0.0814032686109745,0.106727345877715,0,0,0,0,0,0,0,0|short_description=p16@ITGBL1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=9358 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6164 | |||
|TSSclassifier=S | |||
|UniProt=B4DQ02 | |||
|association_with_transcript=0bp_to_ENST00000376162_5end | |||
|description=CAGE_peak_16_at_ITGBL1_5end | |||
|id=chr13:102142296..102142310,+ | |||
|ontology_enrichment_celltype=CL:0002139!1.01e-27!24;CL:0000071!2.11e-19!18;CL:0002546!2.11e-19!18;CL:0000115!6.16e-18!35;CL:0000213!5.87e-17!57;CL:0000215!5.87e-17!57;CL:0000076!3.46e-15!62;CL:0002078!1.38e-13!44;CL:0002541!1.62e-12!3;CL:0002618!1.75e-12!3;CL:0002543!1.54e-10!6;CL:0002544!2.45e-10!6;CL:0005020!5.02e-10!6;CL:0002138!5.02e-10!6;CL:0005022!5.02e-10!6;CL:0000222!1.28e-07!119;CL:1000413!6.86e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002139;3.41e-13;24!CL:0002618;1.96e-12;3!CL:0002541;2.74e-12;3!CL:0002144;2.74e-12;3!CL:0000071;2.33e-08;18!CL:0002543;7.37e-07;6!CL:0002138;7.37e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,3.20e-13,24;CL:0002618,2.07e-12,3;CL:0002144,2.31e-12,3;CL:0002541,3.24e-12,3;CL:0000213,1.02e-09,58;CL:0000215,1.02e-09,58;CL:0000115,4.60e-09,36;CL:0000071,2.25e-08,18;CL:0002546,2.25e-08,18;CL:0002078,2.18e-07,45;CL:0005020,7.17e-07,6;CL:0002138,7.17e-07,6;CL:0005022,7.17e-07,6;CL:0002543,7.58e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002546;2.33e-08;18!CL:0005022;7.37e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!2.11e-19!18;UBERON:0004638!2.11e-19!18;UBERON:0004852!2.11e-19!18;UBERON:0000487!1.72e-15!22;UBERON:0006914!2.22e-13!25;UBERON:0000476!1.62e-12!3;UBERON:0000920!1.62e-12!3;UBERON:0002066!2.39e-12!5;UBERON:0000478!2.31e-11!24;UBERON:0002046!3.02e-11!5;UBERON:0004117!3.02e-11!5;UBERON:0007689!3.02e-11!5;UBERON:0007123!3.02e-11!5;UBERON:0003091!3.02e-11!5;UBERON:0001638!2.91e-10!9;UBERON:0003920!2.91e-10!9;UBERON:0004582!2.91e-10!9;UBERON:0000055!5.52e-10!69;UBERON:0001009!2.48e-08!113;UBERON:0002049!2.90e-08!79;UBERON:0007798!2.90e-08!79;UBERON:0004535!1.17e-07!110;UBERON:0001473!1.59e-07!8;UBERON:0004536!1.59e-07!8;UBERON:0006558!1.59e-07!8;UBERON:0003915!6.86e-07!9;UBERON:0004700!6.86e-07!9;UBERON:0001917!6.86e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0010523;2.74e-12;3!UBERON:0001915;2.74e-12;3!UBERON:0003124;2.74e-12;3!UBERON:0000920;2.74e-12;3!UBERON:0001982;2.74e-12;3!UBERON:0004638;2.33e-08;18!UBERON:0001986;2.33e-08;18!UBERON:0004852;2.33e-08;18!UBERON:0002066;5.54e-08;5!UBERON:0000487;5.24e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010523,2.31e-12,3;UBERON:0001915,2.31e-12,3;UBERON:0001982,2.31e-12,3;UBERON:0000920,3.24e-12,3;UBERON:0004638,2.25e-08,18;UBERON:0001986,2.25e-08,18;UBERON:0004852,2.25e-08,18;UBERON:0002066,5.73e-08,5;UBERON:0000487,5.09e-07,22 | |||
|phase1_expression=0,0,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.79504962946682,0,0.347140501607594,0.56530794192401,0,0,0,0.258416759169329,2.13459757612026,0.33472061276467,0.402829317109147,1.52054421143703,0,0.367663080345869,0,2.05389375053383,0.673588117878509,0.450445921933289,0,0,0.366403487860815,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387815147273333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.831883446123229,0,0,0.234282829985426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0,0.307160702099232,0,0,0.111308705022906,0,0,0,0,0,0.613612095012929,0,0,0.539210106883961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.957003479195758,0.457987967009312,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18608451472249,0.370691816839509,0.835375596043643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.435296032902013,0.17472666824203,0,0,0.0730893170861856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406870733204662,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0.463044948647668,0,1.25362188757041,0,0,0,0,0,0,0,0.303859956177382,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0.231051332300676,0,0,0,0,0,0,0,0.327543835020193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0.205325613712494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705789743431384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224263725161227,0.0636471582781649,0,0,0,0,0,0,0.0814032686109745,0.106727345877715,0,0,0,0,0,0,0,0 | |||
|short_description=p16@ITGBL1 | |||
}} |
Revision as of 01:19, 11 September 2013
Short description: | p16@ITGBL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_16_at_ITGBL1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000376162_5end |
EntrezGene: | ITGBL1 |
HGNC: | 6164 |
UniProt: | B4DQ02 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 3.20e-13 | 24 |
endothelial cell of umbilical vein | 2.07e-12 | 3 |
capillary endothelial cell | 2.31e-12 | 3 |
chorionic membrane mesenchymal stem cell | 3.24e-12 | 3 |
lining cell | 1.02e-09 | 58 |
barrier cell | 1.02e-09 | 58 |
endothelial cell | 4.60e-09 | 36 |
blood vessel endothelial cell | 2.25e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.25e-08 | 18 |
meso-epithelial cell | 2.18e-07 | 45 |
lymphangioblast | 7.17e-07 | 6 |
endothelial cell of lymphatic vessel | 7.17e-07 | 6 |
vascular lymphangioblast | 7.17e-07 | 6 |
vein endothelial cell | 7.58e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
microcirculatory vessel | 2.31e-12 | 3 |
endothelium of capillary | 2.31e-12 | 3 |
capillary | 2.31e-12 | 3 |
egg chorion | 3.24e-12 | 3 |
blood vessel endothelium | 2.25e-08 | 18 |
endothelium | 2.25e-08 | 18 |
cardiovascular system endothelium | 2.25e-08 | 18 |
umbilical vein | 5.73e-08 | 5 |
simple squamous epithelium | 5.09e-07 | 22 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.