FFCP PHASE1:Hg19::chr12:93966332..93966344,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=8835|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=19382|TSSclassifier=S|UniProt=O14508|association_with_transcript=-121bp_to_AF020590,BC010399_5end|coexpression_cluster_id=C110|description=CAGE_peak_26_at_SOCS2_5end|id=chr12:93966332..93966344,+|ontology_enrichment_celltype=CL:0002274!5.43e-14!5;CL:0000457!5.43e-14!5;CL:0002191!5.43e-14!5;CL:0000097!5.43e-14!5;CL:0000831!5.43e-14!5;CL:0002028!5.43e-14!5;CL:0000764!7.15e-10!2;CL:0000765!7.15e-10!2;CL:0000050!7.15e-10!2;CL:0000038!7.15e-10!2;CL:0000558!7.15e-10!2;CL:0000547!7.15e-10!2;CL:0000549!7.15e-10!2;CL:0000550!7.15e-10!2;CL:0000552!7.15e-10!2;CL:0000163!8.77e-08!9;CL:0000763!4.86e-07!112;CL:0000049!4.86e-07!112|ontology_enrichment_celltype_v019=CL:0000764;1.13e-56;2!CL:0000558;1.13e-56;2!CL:0000097;6.21e-07;5|ontology_enrichment_celltype_v019_2=CL:0000764,2.00e-56,2;CL:0000765,2.00e-56,2;CL:0000050,2.00e-56,2;CL:0000038,2.00e-56,2;CL:0000558,2.00e-56,2;CL:0000547,2.00e-56,2;CL:0000549,2.00e-56,2;CL:0000550,2.00e-56,2;CL:0000552,2.00e-56,2;CL:0000763,6.23e-13,108;CL:0000049,6.23e-13,108;CL:0002032,9.40e-09,161;CL:0000837,9.40e-09,161;CL:0000037,2.15e-08,168;CL:0000988,5.65e-08,177;CL:0000097,5.70e-07,5;CL:0002028,5.70e-07,5|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:1036!3.05e-26!8;DOID:8692!1.07e-14!31;DOID:1240!3.38e-11!39;DOID:2531!5.04e-08!51;DOID:0060083!5.04e-08!51|ontology_enrichment_disease_v019=DOID:1036;1.15e-32;8!DOID:8692;5.05e-15;31!DOID:1240;2.87e-10;39|ontology_enrichment_disease_v019_2=DOID:1036,1.15e-32,8;DOID:8692,3.48e-15,31;DOID:1240,3.52e-12,39;DOID:2531,1.99e-09,51;DOID:0060083,1.99e-09,51|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.277064115484183,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.97065295158377,0.616339038092582,0.414656231081544,0.288239906833923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09629938322967,1.0457418040996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422215270595328,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.338583555603207,0,0,0,0,0,0,0,0,0,1.23087398947712,0.270455678475983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0.0897576444097721,0.108647371922008,0,0,0,0,2.35470384592537,0.831058409500782,0.451191321234361,0.980312671588698,0.503464760927528,4.55408958538044,0.953619473882272,0,0,0.282706142867882,0,0,0,0,0.296521128680622,0.247127877893006,0.208843899010911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0.209205692624666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321506296930038,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,5.91066149395241,0,0,0.439656701034247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0.0714765441766563,0.158013611732727,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0.462175628631418,0,0,0,0.253397002022874,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0.202117188958219,0,0,0,0.0717222053926763,0,0,0,0,0,0,0.244482888365733,0,0,0,0|short_description=p26@SOCS2}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=8835 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=19382 | |||
|TSSclassifier=S | |||
|UniProt=O14508 | |||
|association_with_transcript=-121bp_to_AF020590,BC010399_5end | |||
|coexpression_cluster_id=C110 | |||
|description=CAGE_peak_26_at_SOCS2_5end | |||
|id=chr12:93966332..93966344,+ | |||
|ontology_enrichment_celltype=CL:0002274!5.43e-14!5;CL:0000457!5.43e-14!5;CL:0002191!5.43e-14!5;CL:0000097!5.43e-14!5;CL:0000831!5.43e-14!5;CL:0002028!5.43e-14!5;CL:0000764!7.15e-10!2;CL:0000765!7.15e-10!2;CL:0000050!7.15e-10!2;CL:0000038!7.15e-10!2;CL:0000558!7.15e-10!2;CL:0000547!7.15e-10!2;CL:0000549!7.15e-10!2;CL:0000550!7.15e-10!2;CL:0000552!7.15e-10!2;CL:0000163!8.77e-08!9;CL:0000763!4.86e-07!112;CL:0000049!4.86e-07!112 | |||
|ontology_enrichment_celltype_v019=CL:0000764;1.13e-56;2!CL:0000558;1.13e-56;2!CL:0000097;6.21e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,2.00e-56,2;CL:0000765,2.00e-56,2;CL:0000050,2.00e-56,2;CL:0000038,2.00e-56,2;CL:0000558,2.00e-56,2;CL:0000547,2.00e-56,2;CL:0000549,2.00e-56,2;CL:0000550,2.00e-56,2;CL:0000552,2.00e-56,2;CL:0000763,6.23e-13,108;CL:0000049,6.23e-13,108;CL:0002032,9.40e-09,161;CL:0000837,9.40e-09,161;CL:0000037,2.15e-08,168;CL:0000988,5.65e-08,177;CL:0000097,5.70e-07,5;CL:0002028,5.70e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1036!3.05e-26!8;DOID:8692!1.07e-14!31;DOID:1240!3.38e-11!39;DOID:2531!5.04e-08!51;DOID:0060083!5.04e-08!51 | |||
|ontology_enrichment_disease_v019=DOID:1036;1.15e-32;8!DOID:8692;5.05e-15;31!DOID:1240;2.87e-10;39 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,1.15e-32,8;DOID:8692,3.48e-15,31;DOID:1240,3.52e-12,39;DOID:2531,1.99e-09,51;DOID:0060083,1.99e-09,51 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p26@SOCS2 | |||
}} |
Revision as of 01:02, 11 September 2013
Short description: | p26@SOCS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_26_at_SOCS2_5end |
Coexpression cluster: | C110_leukemia_chronic_Eosinophils_acute_Whole_CD34_Lymphatic |
Association with transcript: | -121bp_to_AF020590, BC010399_5end |
EntrezGene: | SOCS2 |
HGNC: | 19382 |
UniProt: | O14508 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 2.00e-56 | 2 |
erythroblast | 2.00e-56 | 2 |
megakaryocyte-erythroid progenitor cell | 2.00e-56 | 2 |
erythroid progenitor cell | 2.00e-56 | 2 |
reticulocyte | 2.00e-56 | 2 |
proerythroblast | 2.00e-56 | 2 |
basophilic erythroblast | 2.00e-56 | 2 |
polychromatophilic erythroblast | 2.00e-56 | 2 |
orthochromatic erythroblast | 2.00e-56 | 2 |
myeloid cell | 6.23e-13 | 108 |
common myeloid progenitor | 6.23e-13 | 108 |
hematopoietic oligopotent progenitor cell | 9.40e-09 | 161 |
hematopoietic multipotent progenitor cell | 9.40e-09 | 161 |
hematopoietic stem cell | 2.15e-08 | 168 |
hematopoietic cell | 5.65e-08 | 177 |
mast cell | 5.70e-07 | 5 |
basophil mast progenitor cell | 5.70e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 1.15e-32 | 8 |
myeloid leukemia | 3.48e-15 | 31 |
leukemia | 3.52e-12 | 39 |
hematologic cancer | 1.99e-09 | 51 |
immune system cancer | 1.99e-09 | 51 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.