FFCP PHASE1:Hg19::chr12:85673913..85673919,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=8092|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=1494|TSSclassifier=S|UniProt=Q15699|association_with_transcript=28bp_to_ENST00000316824_5end|coexpression_cluster_id=C3339|description=CAGE_peak_7_at_ALX1_5end|id=chr12:85673913..85673919,+|ontology_enrichment_celltype=CL:0002150!2.47e-22!3;CL:0000861!2.47e-22!3;CL:0002550!1.63e-08!1;CL:0000710!1.98e-08!20;CL:0000235!4.84e-07!10|ontology_enrichment_celltype_v019=CL:0000333;3.26e-11;5|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0003099;3.99e-50;1!UBERON:0003852;3.99e-50;1!UBERON:0005062;1.13e-13;4!UBERON:0007284;1.13e-13;4|ontology_enrichment_disease=DOID:3095!5.14e-11!22;DOID:2994!5.14e-11!22;DOID:171!5.15e-07!10|ontology_enrichment_disease_v019=DOID:5409;8.81e-14;4!DOID:169;1.44e-09;6!DOID:1325;1.89e-08;7!DOID:3904;1.89e-08;7!DOID:3905;7.48e-07;9|ontology_enrichment_disease_v019_2=DOID:5409,8.82e-14,4;DOID:169,1.32e-09,6;DOID:1325,1.89e-08,7;DOID:3904,1.89e-08,7;DOID:3905,7.48e-07,9|ontology_enrichment_uberon=UBERON:0005705!1.13e-08!1;UBERON:0008193!1.13e-08!1;UBERON:0002514!1.13e-08!1;UBERON:0003462!1.13e-08!1;UBERON:0008001!1.13e-08!1;UBERON:0007914!1.13e-08!1;UBERON:0003457!1.13e-08!1;UBERON:0009292!1.13e-08!1;UBERON:0007375!1.13e-08!1;UBERON:0003323!1.13e-08!1;UBERON:0002397!1.13e-08!1;UBERON:0001709!1.13e-08!1;UBERON:0004066!1.13e-08!1;UBERON:0002244!1.13e-08!1;UBERON:0005620!1.13e-08!1;UBERON:0004068!1.13e-08!1;UBERON:0004362!1.13e-08!1|ontology_enrichment_uberon_v019=UBERON:0005705;3.99e-50;1!UBERON:0008193;3.99e-50;1!UBERON:0010912;3.99e-50;1!UBERON:0002514;3.99e-50;1!UBERON:0003457;3.99e-50;1!UBERON:0008907;3.99e-50;1!UBERON:0008001;3.99e-50;1!UBERON:0007213;3.99e-50;1!UBERON:0009891;3.99e-50;1!UBERON:0007914;3.99e-50;1!UBERON:0007375;3.99e-50;1!UBERON:0003323;3.99e-50;1!UBERON:0010258;3.99e-50;1!UBERON:0005253;3.99e-50;1!UBERON:0007842;3.99e-50;1!UBERON:0002397;3.99e-50;1!UBERON:0003113;3.99e-50;1!UBERON:0003277;3.99e-50;1!UBERON:0001709;3.99e-50;1!UBERON:0002244;3.99e-50;1!UBERON:0005620;3.99e-50;1!UBERON:0010364;3.99e-50;1!UBERON:0004288;3.99e-50;1!UBERON:0004089;7.14e-26;2!UBERON:0001708;1.13e-13;4!UBERON:0008895;1.13e-13;4!UBERON:0000013;3.26e-11;5!UBERON:0002410;3.26e-11;5!UBERON:0011159;3.26e-11;5!UBERON:0003104;2.18e-08;7!UBERON:0009142;2.18e-08;7!UBERON:0000010;8.37e-07;8|ontology_enrichment_uberon_v019_2=UBERON:0005705,3.99e-50,1;UBERON:0008193,3.99e-50,1;UBERON:0010912,3.99e-50,1;UBERON:0002514,3.99e-50,1;UBERON:0003457,3.99e-50,1;UBERON:0008907,3.99e-50,1;UBERON:0008001,3.99e-50,1;UBERON:0007213,3.99e-50,1;UBERON:0009891,3.99e-50,1;UBERON:0007914,3.99e-50,1;UBERON:0009292,3.99e-50,1;UBERON:0003099,3.99e-50,1;UBERON:0007375,3.99e-50,1;UBERON:0003323,3.99e-50,1;UBERON:0010258,3.99e-50,1;UBERON:0007842,3.99e-50,1;UBERON:0009494,3.99e-50,1;UBERON:0010042,3.99e-50,1;UBERON:0010045,3.99e-50,1;UBERON:0010259,3.99e-50,1;UBERON:0010359,3.99e-50,1;UBERON:0009526,3.99e-50,1;UBERON:0002397,3.99e-50,1;UBERON:0003113,3.99e-50,1;UBERON:0003277,3.99e-50,1;UBERON:0001709,3.99e-50,1;UBERON:0004066,3.99e-50,1;UBERON:0002244,3.99e-50,1;UBERON:0005620,3.99e-50,1;UBERON:0004362,3.99e-50,1;UBERON:0010364,3.99e-50,1;UBERON:0010046,3.99e-50,1;UBERON:0005868,3.99e-50,1;UBERON:0007238,3.99e-50,1;UBERON:0004288,3.99e-50,1;UBERON:0004068,3.99e-50,1;UBERON:0010334,3.99e-50,1;UBERON:0003852,3.99e-50,1;UBERON:0010253,3.99e-50,1;UBERON:0005253,7.14e-26,2;UBERON:0004089,7.14e-26,2;UBERON:0001708,1.13e-13,4;UBERON:0008895,1.13e-13,4;UBERON:0000013,2.94e-11,5;UBERON:0002410,2.94e-11,5;UBERON:0011159,3.26e-11,5;UBERON:0010188,1.44e-09,6;UBERON:0002539,1.44e-09,6;UBERON:0008816,1.44e-09,6;UBERON:0000010,7.91e-07,8|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.70296429550139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.250237039743928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381988425558278,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=8092 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1494 | |||
|TSSclassifier=S | |||
|UniProt=Q15699 | |||
|association_with_transcript=28bp_to_ENST00000316824_5end | |||
|coexpression_cluster_id=C3339 | |||
|description=CAGE_peak_7_at_ALX1_5end | |||
|id=chr12:85673913..85673919,+ | |||
|ontology_enrichment_celltype=CL:0002150!2.47e-22!3;CL:0000861!2.47e-22!3;CL:0002550!1.63e-08!1;CL:0000710!1.98e-08!20;CL:0000235!4.84e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000333;3.26e-11;5 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003099;3.99e-50;1!UBERON:0003852;3.99e-50;1!UBERON:0005062;1.13e-13;4!UBERON:0007284;1.13e-13;4 | |||
|ontology_enrichment_disease=DOID:3095!5.14e-11!22;DOID:2994!5.14e-11!22;DOID:171!5.15e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:5409;8.81e-14;4!DOID:169;1.44e-09;6!DOID:1325;1.89e-08;7!DOID:3904;1.89e-08;7!DOID:3905;7.48e-07;9 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,8.82e-14,4;DOID:169,1.32e-09,6;DOID:1325,1.89e-08,7;DOID:3904,1.89e-08,7;DOID:3905,7.48e-07,9 | |||
|ontology_enrichment_uberon=UBERON:0005705!1.13e-08!1;UBERON:0008193!1.13e-08!1;UBERON:0002514!1.13e-08!1;UBERON:0003462!1.13e-08!1;UBERON:0008001!1.13e-08!1;UBERON:0007914!1.13e-08!1;UBERON:0003457!1.13e-08!1;UBERON:0009292!1.13e-08!1;UBERON:0007375!1.13e-08!1;UBERON:0003323!1.13e-08!1;UBERON:0002397!1.13e-08!1;UBERON:0001709!1.13e-08!1;UBERON:0004066!1.13e-08!1;UBERON:0002244!1.13e-08!1;UBERON:0005620!1.13e-08!1;UBERON:0004068!1.13e-08!1;UBERON:0004362!1.13e-08!1 | |||
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|short_description=p7@ALX1 | |||
}} |
Revision as of 00:44, 11 September 2013
Short description: | p7@ALX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_ALX1_5end |
Coexpression cluster: | C3339_small_normal_epitheloid_neuroblastoma_neuroectodermal_kidney_Olfactory |
Association with transcript: | 28bp_to_ENST00000316824_5end |
EntrezGene: | ALX1 |
HGNC: | 1494 |
UniProt: | Q15699 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 8.82e-14 | 4 |
neuroendocrine tumor | 1.32e-09 | 6 |
bronchus cancer | 1.89e-08 | 7 |
bronchogenic carcinoma | 1.89e-08 | 7 |
lung carcinoma | 7.48e-07 | 9 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.