FFCP PHASE1:Hg19::chr12:49581152..49581188,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7846|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=20766|TSSclassifier=N|UniProt=F8VXZ7|association_with_transcript=52bp_to_ENST00000550811_5end|description=CAGE_peak_13_at_TUBA1A_5end|id=chr12:49581152..49581188,-|ontology_enrichment_celltype=CL:0000047!1.11e-08!8|ontology_enrichment_celltype_v019=CL:0000540;4.90e-13;6!CL:0000404;4.90e-13;6!CL:0002553;3.67e-09;1|ontology_enrichment_celltype_v019_2=CL:0000047,8.48e-17,8;CL:0000540,5.43e-13,6;CL:0000031,5.43e-13,6;CL:0000404,5.43e-13,6;CL:0002553,2.77e-09,1|ontology_enrichment_development_v019=UBERON:0006241;3.03e-25;3!UBERON:0003057;3.03e-25;3!CL:0000031;4.90e-13;6!UBERON:0006601;8.53e-10;82!UBERON:0006222;3.67e-09;1!UBERON:0005425;3.67e-09;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!6.48e-50!94;UBERON:0001016!6.48e-50!94;UBERON:0001017!3.32e-49!82;UBERON:0005743!4.30e-48!86;UBERON:0001049!1.25e-43!57;UBERON:0005068!1.25e-43!57;UBERON:0006241!1.25e-43!57;UBERON:0007135!1.25e-43!57;UBERON:0000955!8.90e-35!69;UBERON:0006238!8.90e-35!69;UBERON:0002616!2.43e-34!59;UBERON:0003075!4.01e-32!86;UBERON:0007284!4.01e-32!86;UBERON:0002346!9.88e-32!90;UBERON:0002780!2.97e-28!41;UBERON:0001890!2.97e-28!41;UBERON:0006240!2.97e-28!41;UBERON:0002020!1.52e-27!34;UBERON:0003528!1.52e-27!34;UBERON:0001893!1.88e-27!34;UBERON:0003080!2.20e-27!42;UBERON:0002791!6.26e-26!33;UBERON:0001869!2.72e-24!32;UBERON:0000924!1.72e-23!173;UBERON:0006601!1.72e-23!173;UBERON:0004121!2.38e-23!169;UBERON:0002619!6.82e-20!22;UBERON:0001950!1.08e-19!20;UBERON:0000956!5.18e-19!25;UBERON:0000203!5.18e-19!25;UBERON:0003056!6.44e-19!61;UBERON:0007023!1.48e-18!115;UBERON:0003076!8.76e-18!15;UBERON:0003057!8.76e-18!15;UBERON:0000033!6.00e-17!123;UBERON:0000153!1.80e-16!129;UBERON:0007811!1.80e-16!129;UBERON:0004732!3.51e-14!13;UBERON:0004733!1.57e-12!12;UBERON:0002028!1.57e-12!12;UBERON:0007277!1.57e-12!12;UBERON:0002298!1.64e-12!8;UBERON:0002308!4.20e-10!9;UBERON:0000125!4.20e-10!9;UBERON:0001871!4.77e-08!7;UBERON:0000025!5.61e-08!194;UBERON:0000200!7.83e-08!6;UBERON:0002680!1.46e-07!9;UBERON:0001895!1.46e-07!9;UBERON:0010092!1.46e-07!9;UBERON:0002240!2.52e-07!3;UBERON:0001896!2.62e-07!3;UBERON:0005290!2.62e-07!3;UBERON:0010096!2.62e-07!3;UBERON:0002420!3.29e-07!9;UBERON:0007245!3.29e-07!9;UBERON:0010009!3.29e-07!9;UBERON:0010011!3.29e-07!9;UBERON:0000454!3.29e-07!9;UBERON:0000988!3.89e-07!3;UBERON:0006331!4.73e-07!3;UBERON:0009663!8.42e-07!7|ontology_enrichment_uberon_v019=UBERON:0002298;8.01e-48;6!UBERON:0004732;1.85e-29;13!UBERON:0001896;2.47e-25;3!UBERON:0005290;2.47e-25;3!UBERON:0002240;3.03e-25;3!UBERON:0005174;3.03e-25;3!UBERON:0001137;3.03e-25;3!UBERON:0000988;2.60e-24;3!UBERON:0004733;9.51e-24;12!UBERON:0002028;9.51e-24;12!UBERON:0000073;6.34e-19;53!UBERON:0002616;6.34e-19;53!UBERON:0002148;6.46e-17;2!UBERON:0005162;6.46e-17;2!UBERON:0000122;6.46e-17;2!UBERON:0006331;6.46e-17;2!UBERON:0009662;6.46e-17;2!UBERON:0001017;5.15e-15;75!UBERON:0001016;3.30e-14;83!UBERON:0002780;1.02e-10;41!UBERON:0001890;1.02e-10;41!UBERON:0000955;2.47e-10;68!UBERON:0003528;5.48e-10;34!UBERON:0002020;5.48e-10;34!UBERON:0002336;1.76e-09;1!UBERON:0011215;1.76e-09;1!UBERON:0001018;1.76e-09;1!UBERON:0002473;1.76e-09;1!UBERON:0005340;1.76e-09;1!UBERON:0003544;1.76e-09;1!UBERON:0005970;1.76e-09;1!UBERON:0002316;1.76e-09;1!UBERON:0001020;1.76e-09;1!UBERON:0002437;1.76e-09;1!UBERON:0001950;3.58e-09;20!UBERON:0002038;3.67e-09;1!UBERON:0000941;3.67e-09;1!UBERON:0001785;3.67e-09;1!UBERON:0002464;3.67e-09;1!UBERON:0004904;3.67e-09;1!UBERON:0001021;3.67e-09;1!UBERON:0009661;3.67e-09;1!UBERON:0002950;3.67e-09;1!UBERON:0001891;3.67e-09;1!UBERON:0002680;1.76e-08;9!UBERON:0000125;1.76e-08;9!UBERON:0002308;1.76e-08;9!UBERON:0001895;1.76e-08;9!UBERON:0001893;2.32e-08;34!UBERON:0002619;2.32e-08;22!UBERON:0000956;2.24e-07;25!UBERON:0000203;2.24e-07;25!UBERON:0002021;3.55e-07;5!UBERON:0002791;5.58e-07;32|ontology_enrichment_uberon_v019_2=UBERON:0002298,4.20e-48,6;UBERON:0001017,2.12e-47,81;UBERON:0001016,2.07e-46,89;UBERON:0003076,1.36e-42,15;UBERON:0003057,1.36e-42,15;UBERON:0001049,6.51e-42,56;UBERON:0005068,6.51e-42,56;UBERON:0006241,6.51e-42,56;UBERON:0007135,6.51e-42,56;UBERON:0003075,3.45e-31,82;UBERON:0007284,3.45e-31,82;UBERON:0000073,3.88e-30,53;UBERON:0002616,3.88e-30,53;UBERON:0004732,1.28e-29,13;UBERON:0002346,1.32e-29,86;UBERON:0000955,4.64e-26,68;UBERON:0006238,4.64e-26,68;UBERON:0002240,2.19e-25,3;UBERON:0005174,2.19e-25,3;UBERON:0001137,2.19e-25,3;UBERON:0001896,2.58e-25,3;UBERON:0005290,2.58e-25,3;UBERON:0010096,2.58e-25,3;UBERON:0000988,1.31e-24,3;UBERON:0010371,5.70e-24,104;UBERON:0004733,6.93e-24,12;UBERON:0002028,6.93e-24,12;UBERON:0007277,6.93e-24,12;UBERON:0004121,7.89e-23,171;UBERON:0000924,7.89e-23,171;UBERON:0006601,7.89e-23,171;UBERON:0011216,2.47e-18,223;UBERON:0010314,3.16e-18,132;UBERON:0002148,5.08e-17,2;UBERON:0006331,5.08e-17,2;UBERON:00096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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=7846 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20766 | |||
|TSSclassifier=N | |||
|UniProt=F8VXZ7 | |||
|association_with_transcript=52bp_to_ENST00000550811_5end | |||
|description=CAGE_peak_13_at_TUBA1A_5end | |||
|id=chr12:49581152..49581188,- | |||
|ontology_enrichment_celltype=CL:0000047!1.11e-08!8 | |||
|ontology_enrichment_celltype_v019=CL:0000540;4.90e-13;6!CL:0000404;4.90e-13;6!CL:0002553;3.67e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,8.48e-17,8;CL:0000540,5.43e-13,6;CL:0000031,5.43e-13,6;CL:0000404,5.43e-13,6;CL:0002553,2.77e-09,1 | |||
|ontology_enrichment_development_v019=UBERON:0006241;3.03e-25;3!UBERON:0003057;3.03e-25;3!CL:0000031;4.90e-13;6!UBERON:0006601;8.53e-10;82!UBERON:0006222;3.67e-09;1!UBERON:0005425;3.67e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p13@TUBA1A | |||
}} |
Revision as of 22:53, 10 September 2013
Short description: | p13@TUBA1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_TUBA1A_5end |
Coexpression cluster: | NA |
Association with transcript: | 52bp_to_ENST00000550811_5end |
EntrezGene: | TUBA1A |
HGNC: | 20766 |
UniProt: | F8VXZ7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 8.48e-17 | 8 |
neuron | 5.43e-13 | 6 |
neuroblast | 5.43e-13 | 6 |
electrically signaling cell | 5.43e-13 | 6 |
lung fibroblast | 2.77e-09 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.