FFCP PHASE1:Hg19::chr12:46661092..46661130,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=81539|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=13447|TSSclassifier=S|UniProt=F8VX04|association_with_transcript=353bp_to_ENST00000552197,uc009zkj.1_5end|description=CAGE_peak_13_at_SLC38A1_5end|id=chr12:46661092..46661130,-|ontology_enrichment_celltype=CL:0002319!6.46e-08!25;CL:0000047!5.82e-07!8|ontology_enrichment_celltype_v019=CL:0002319;2.37e-11;25!CL:0000540;1.02e-09;6!CL:0000404;1.02e-09;6!CL:0002322;4.66e-07;5!CL:0002605;9.77e-07;3|ontology_enrichment_celltype_v019_2=CL:0000047,4.68e-14,8;CL:0002319,1.39e-11,25;CL:0000540,6.09e-10,6;CL:0000031,6.09e-10,6;CL:0000404,6.09e-10,6;CL:0002322,4.37e-07,5|ontology_enrichment_development_v019=CL:0000031;1.02e-09;6!UBERON:0006241;1.49e-07;3!UBERON:0003057;1.49e-07;3!UBERON:0006215;9.77e-07;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.31e-19!82;UBERON:0005743!8.57e-18!86;UBERON:0000073!3.16e-17!94;UBERON:0001016!3.16e-17!94;UBERON:0001049!4.03e-17!57;UBERON:0005068!4.03e-17!57;UBERON:0006241!4.03e-17!57;UBERON:0007135!4.03e-17!57;UBERON:0003075!1.05e-14!86;UBERON:0007284!1.05e-14!86;UBERON:0002346!1.70e-13!90;UBERON:0004121!2.70e-13!169;UBERON:0002616!4.59e-13!59;UBERON:0000955!1.11e-12!69;UBERON:0006238!1.11e-12!69;UBERON:0000924!1.40e-12!173;UBERON:0006601!1.40e-12!173;UBERON:0003080!2.90e-12!42;UBERON:0002780!6.62e-12!41;UBERON:0001890!6.62e-12!41;UBERON:0006240!6.62e-12!41;UBERON:0001893!8.76e-12!34;UBERON:0002791!2.75e-11!33;UBERON:0000956!6.15e-11!25;UBERON:0000203!6.15e-11!25;UBERON:0001869!1.14e-10!32;UBERON:0002020!2.40e-10!34;UBERON:0003528!2.40e-10!34;UBERON:0003056!1.75e-09!61;UBERON:0002619!2.90e-09!22;UBERON:0000033!3.11e-09!123;UBERON:0000153!3.26e-09!129;UBERON:0007811!3.26e-09!129;UBERON:0000064!2.90e-08!219;UBERON:0001950!4.07e-08!20;UBERON:0007023!8.33e-08!115|ontology_enrichment_uberon_v019=UBERON:0000956;1.95e-10;25!UBERON:0000203;1.95e-10;25!UBERON:0001893;7.54e-10;34!UBERON:0000073;2.86e-09;53!UBERON:0002616;2.86e-09;53!UBERON:0001869;1.21e-08;32!UBERON:0002791;2.33e-08;32!UBERON:0002780;9.91e-08;41!UBERON:0001890;9.91e-08;41!UBERON:0003528;1.08e-07;34!UBERON:0002020;1.08e-07;34!UBERON:0001896;1.14e-07;3!UBERON:0005290;1.14e-07;3!UBERON:0002240;1.49e-07;3!UBERON:0005174;1.49e-07;3!UBERON:0001137;1.49e-07;3!UBERON:0002619;4.71e-07;22|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.59e-20,81;UBERON:0001049,1.38e-17,56;UBERON:0005068,1.38e-17,56;UBERON:0006241,1.38e-17,56;UBERON:0007135,1.38e-17,56;UBERON:0001016,1.41e-17,89;UBERON:0003075,9.05e-16,82;UBERON:0007284,9.05e-16,82;UBERON:0004121,1.28e-15,171;UBERON:0000924,1.28e-15,171;UBERON:0006601,1.28e-15,171;UBERON:0010371,3.29e-15,104;UBERON:0002346,1.17e-14,86;UBERON:0000073,4.94e-14,53;UBERON:0002616,4.94e-14,53;UBERON:0001893,5.76e-11,34;UBERON:0000955,1.18e-10,68;UBERON:0006238,1.18e-10,68;UBERON:0000956,2.35e-10,25;UBERON:0000203,2.35e-10,25;UBERON:0003076,2.70e-10,15;UBERON:0003057,2.70e-10,15;UBERON:0002780,1.02e-09,41;UBERON:0001890,1.02e-09,41;UBERON:0003080,1.02e-09,41;UBERON:0006240,1.02e-09,41;UBERON:0010314,4.92e-09,132;UBERON:0002791,7.45e-09,32;UBERON:0001869,8.58e-09,32;UBERON:0003528,3.63e-08,34;UBERON:0002020,3.63e-08,34;UBERON:0003056,4.76e-08,61;UBERON:0001896,1.82e-07,3;UBERON:0005290,1.82e-07,3;UBERON:0010096,1.82e-07,3;UBERON:0002240,2.07e-07,3;UBERON:0005174,2.07e-07,3;UBERON:0001137,2.07e-07,3;UBERON:0002619,5.31e-07,22|phase1_expression=1.2717486548939,0.214100523890983,1.69145284915165,0,0.893922188854576,0.872338524100369,0,0,0,0,0,1.31064823278103,0.791300934685361,0.37129905888014,0,0,0,0,0,0.246242116153576,0.408001382488506,0,1.14494394852423,1.50561867580173,1.38096903554283,0.229240217243854,0.246301768349837,0.236132343941038,0,0.383829398097213,0.464448369948228,0,0,0,0,0.142169232487422,0.293600439334847,0,0.401088894940283,0.217010870715852,0,0,0,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0.661044872784862,0,0,0,0.382273228125229,0,0,0,0.590129310341499,0.393010762749165,0.616804496998528,0.167186495390678,0,0,0,0,0,0.443067789167242,0,0.25618263945135,0.130059347559878,0,0,0.289803085735052,0.14828656316206,1.07016331235885,0,0,0,0,0.253019692019503,0.318565414324097,0,0,0.150575119077773,0.127986611154418,0,0.236777252044017,1.64225599384209,0.403213486449465,0.267440195783507,0.434473211648397,0,0,0.12786256184353,0,0.50133791063589,0,0,0,2.45790524626576,0.665188192387692,0.351339142772504,0.196468613246569,0,0,0,0,0,0.238490624305342,1.71598473234038,1.11437250398869,0.198762407366705,0,0.347140501607594,0,0,0.275118041940067,0.208994966536811,0.516833518338658,1.42306505074684,0,0.402829317109147,0,0.732186172644509,0,0.81014194788176,0.357198913136319,0.44905874525234,0,0,0.949265659568129,0,0,0,0,0,0.379891534993739,1.05927344650575,0.860509862246441,0.354668382198357,0.560677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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=81539 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13447 | |||
|TSSclassifier=S | |||
|UniProt=F8VX04 | |||
|association_with_transcript=353bp_to_ENST00000552197,uc009zkj.1_5end | |||
|description=CAGE_peak_13_at_SLC38A1_5end | |||
|id=chr12:46661092..46661130,- | |||
|ontology_enrichment_celltype=CL:0002319!6.46e-08!25;CL:0000047!5.82e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0002319;2.37e-11;25!CL:0000540;1.02e-09;6!CL:0000404;1.02e-09;6!CL:0002322;4.66e-07;5!CL:0002605;9.77e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,4.68e-14,8;CL:0002319,1.39e-11,25;CL:0000540,6.09e-10,6;CL:0000031,6.09e-10,6;CL:0000404,6.09e-10,6;CL:0002322,4.37e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000031;1.02e-09;6!UBERON:0006241;1.49e-07;3!UBERON:0003057;1.49e-07;3!UBERON:0006215;9.77e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0000956;1.95e-10;25!UBERON:0000203;1.95e-10;25!UBERON:0001893;7.54e-10;34!UBERON:0000073;2.86e-09;53!UBERON:0002616;2.86e-09;53!UBERON:0001869;1.21e-08;32!UBERON:0002791;2.33e-08;32!UBERON:0002780;9.91e-08;41!UBERON:0001890;9.91e-08;41!UBERON:0003528;1.08e-07;34!UBERON:0002020;1.08e-07;34!UBERON:0001896;1.14e-07;3!UBERON:0005290;1.14e-07;3!UBERON:0002240;1.49e-07;3!UBERON:0005174;1.49e-07;3!UBERON:0001137;1.49e-07;3!UBERON:0002619;4.71e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.59e-20,81;UBERON:0001049,1.38e-17,56;UBERON:0005068,1.38e-17,56;UBERON:0006241,1.38e-17,56;UBERON:0007135,1.38e-17,56;UBERON:0001016,1.41e-17,89;UBERON:0003075,9.05e-16,82;UBERON:0007284,9.05e-16,82;UBERON:0004121,1.28e-15,171;UBERON:0000924,1.28e-15,171;UBERON:0006601,1.28e-15,171;UBERON:0010371,3.29e-15,104;UBERON:0002346,1.17e-14,86;UBERON:0000073,4.94e-14,53;UBERON:0002616,4.94e-14,53;UBERON:0001893,5.76e-11,34;UBERON:0000955,1.18e-10,68;UBERON:0006238,1.18e-10,68;UBERON:0000956,2.35e-10,25;UBERON:0000203,2.35e-10,25;UBERON:0003076,2.70e-10,15;UBERON:0003057,2.70e-10,15;UBERON:0002780,1.02e-09,41;UBERON:0001890,1.02e-09,41;UBERON:0003080,1.02e-09,41;UBERON:0006240,1.02e-09,41;UBERON:0010314,4.92e-09,132;UBERON:0002791,7.45e-09,32;UBERON:0001869,8.58e-09,32;UBERON:0003528,3.63e-08,34;UBERON:0002020,3.63e-08,34;UBERON:0003056,4.76e-08,61;UBERON:0001896,1.82e-07,3;UBERON:0005290,1.82e-07,3;UBERON:0010096,1.82e-07,3;UBERON:0002240,2.07e-07,3;UBERON:0005174,2.07e-07,3;UBERON:0001137,2.07e-07,3;UBERON:0002619,5.31e-07,22 | |||
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| |||
|short_description=p13@SLC38A1 | |||
}} |
Revision as of 22:42, 10 September 2013
Short description: | p13@SLC38A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_SLC38A1_5end |
Coexpression cluster: | NA |
Association with transcript: | 353bp_to_ENST00000552197, uc009zkj.1_5end |
EntrezGene: | SLC38A1 |
HGNC: | 13447 |
UniProt: | F8VX04 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 4.68e-14 | 8 |
neural cell | 1.39e-11 | 25 |
neuron | 6.09e-10 | 6 |
neuroblast | 6.09e-10 | 6 |
electrically signaling cell | 6.09e-10 | 6 |
embryonic stem cell | 4.37e-07 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.