FFCP PHASE1:Hg19::chr12:16500037..16500065,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4257|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=7061|TSSclassifier=S|UniProt=P10620,F5H7F6|association_with_transcript=-10bp_to_ENST00000010404,ENST00000536371,NM_145792,uc001rdf.2_5end|description=CAGE_peak_5_at_MGST1_5end|id=chr12:16500037..16500065,+|ontology_enrichment_celltype=CL:0000136!6.40e-13!15|ontology_enrichment_celltype_v019=CL:0000136;5.99e-22;13!CL:0000182;7.35e-07;12|ontology_enrichment_celltype_v019_2=CL:0000136,1.69e-24,15;CL:0000182,4.52e-07,12|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000468!7.71e-09!659;UBERON:0001013!1.45e-08!14;UBERON:0002050!1.06e-07!605;UBERON:0005423!1.06e-07!605;UBERON:0007023!1.17e-07!115;UBERON:0000923!1.45e-07!604;UBERON:0005291!1.45e-07!604;UBERON:0006598!1.45e-07!604;UBERON:0002532!1.45e-07!604;UBERON:0000062!1.48e-07!511;UBERON:0000479!3.14e-07!787;UBERON:0000481!4.54e-07!347;UBERON:0000922!5.16e-07!612;UBERON:0004122!6.97e-07!15;UBERON:0000467!8.04e-07!625|ontology_enrichment_uberon_v019=UBERON:0001013;2.03e-14;14!UBERON:0004457;1.18e-10;9!UBERON:0000042;1.18e-10;9!UBERON:0003688;6.54e-10;6!UBERON:0002358;6.54e-10;6!UBERON:0003684;6.54e-10;6!UBERON:0001178;6.54e-10;6!UBERON:0002107;1.60e-07;19!UBERON:0006925;1.60e-07;19!UBERON:0002368;3.38e-07;33!UBERON:0002423;3.62e-07;25|ontology_enrichment_uberon_v019_2=UBERON:0001013,2.33e-14,14;UBERON:0003688,4.48e-10,6;UBERON:0002358,4.48e-10,6;UBERON:0003684,4.48e-10,6;UBERON:0001178,4.48e-10,6;UBERON:0002530,9.58e-10,59;UBERON:0002100,9.06e-09,199;UBERON:0003929,1.42e-08,54;UBERON:0002107,1.13e-07,19;UBERON:0006925,1.13e-07,19;UBERON:0008836,1.13e-07,19;UBERON:0004122,1.16e-07,15;UBERON:0004457,1.58e-07,12;UBERON:0000042,1.58e-07,12;UBERON:0008835,1.97e-07,22;UBERON:0003894,1.97e-07,22;UBERON:0009497,3.20e-07,25;UBERON:0000015,3.20e-07,25;UBERON:0002423,3.20e-07,25;UBERON:0006235,3.20e-07,25;UBERON:0004161,3.20e-07,25;UBERON:0002368,3.73e-07,35;UBERON:0005256,4.82e-07,122;UBERON:0004921,5.11e-07,118;UBERON:0009854,5.54e-07,23;UBERON:0001007,7.49e-07,145;UBERON:0001555,7.49e-07,145;UBERON:0007026,7.49e-07,145;UBERON:0003104,8.27e-07,160;UBERON:0009142,8.27e-07,160;UBERON:0000162,9.11e-07,14;UBERON:0001353,9.11e-07,14;UBERON:0000163,9.11e-07,14;UBERON:0006866,9.11e-07,14;UBERON:0000164,9.11e-07,14;UBERON:0000931,9.11e-07,14|phase1_expression=18.5311946855968,7.27941781229343,16.3507108751327,4.00293193412522,10.7270662662549,7.85104671690332,5.06599756336621,12.0026775951098,9.92505387159386,0.245733936501509,0,0,0,2.59909341216098,1.32558950291166,0,0,1.46062018077475,0,0.123121058076788,0,0.313454721478088,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0.217010870715852,0,0.32389366601898,0.257575567634187,1.01778767145695,0.755751887377619,0.727752183563449,1.39457422143411,0.822335776043652,0,0.863077176966451,0.512321413058201,0.47296445977717,0,0,0,1.31769637679823,1.09162460023138,0.674170453335254,0.612167784741805,0.320929027076094,0.639337125799041,1.31940520074686,0.797854630486527,0,0.580418477257168,0,0,0.75374599577023,1.5644487552606,0.868755378820466,0.605399502633369,0.736555271975129,0.949387162322653,0,0,0,0.44931452458598,0.450530678524519,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,2.43806866313962,0.670700859703636,0.767175371061182,0.722878304769133,0.50133791063589,0.724232594804119,0,0,0,0,0,0.196468613246569,0,0,0.324547393654683,1.0447784237956,0.664789802594326,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0,0.529636723252875,0.573673241497627,0.709336764396714,0.560677600142307,0,0,1.8672662123986,0.67355336034844,0,0.454072282934794,0.576175924479999,0.70296429550139,0,0,1.94283284717341,0.117434498643765,0.161872944368132,0.140450806702248,0.816616685019573,0.122834317311768,1.96318984233954,0,0.494533858557114,0,0,0,0.250237039743928,0,0.877955241761676,1.5324389789951,2.10333282469236,0.567160915800105,0,0,0.847727604638247,0,0.206105058476878,0,0.18611685633159,0.168776332241266,0.389748020644795,0.252433774244115,0.552299391853796,1.61646056818812,0,0.403008392910561,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,1.39310378409594,0,0.473227200159376,0.168584690078102,0.241011029883482,0.330881918197182,0.871517776369625,0.474541238222193,0.674156540800822,0.196221465125346,0.38474715694639,0,0,0.8231480226628,0,7.60530208930985,1.96565443335525,4.72631925345123,0,1.47586126251736,0.514703430895577,0.109750285408626,0,0,0.925884451585296,0,1.03993478527958,0,0,0.469634776943287,0.144366447761074,0,0.190254152234598,0,0,0,0.702012795417713,0,0,0,0.708875486211932,0.179117045405697,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0.112131084345361,0.43596006883328,0.07333828582095,0.129271715757778,7.15312891703765,0,0.531876233169741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7086,0.4226557275834,0.339854229375634,0,0,0,0.357107877211315,0,2.88868920081006,0,0.458729283404541,0.143339583151451,0,0.271965960763659,0,0,0.371995018166751,3.23522940041993,1.73050624849516,0,0,0,0,0,0,0,0.606229585745915,0,0,0.103432995861895,1.49263787330687,0,0,0.186224142887574,0.112131862580613,1.78212043178862,1.0105859447911,0.435433495793923,0,0,1.57788851863888,0,0.488419611665847,1.28072815053259,1.9307228228694,0.538951212639521,0,0.122241444182866,0.406896178315738,10.6521083869682,1.40891655513718,0|short_description=p5@MGST1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=4257 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7061 | |||
|TSSclassifier=S | |||
|UniProt=P10620,F5H7F6 | |||
|association_with_transcript=-10bp_to_ENST00000010404,ENST00000536371,NM_145792,uc001rdf.2_5end | |||
|description=CAGE_peak_5_at_MGST1_5end | |||
|id=chr12:16500037..16500065,+ | |||
|ontology_enrichment_celltype=CL:0000136!6.40e-13!15 | |||
|ontology_enrichment_celltype_v019=CL:0000136;5.99e-22;13!CL:0000182;7.35e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,1.69e-24,15;CL:0000182,4.52e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!7.71e-09!659;UBERON:0001013!1.45e-08!14;UBERON:0002050!1.06e-07!605;UBERON:0005423!1.06e-07!605;UBERON:0007023!1.17e-07!115;UBERON:0000923!1.45e-07!604;UBERON:0005291!1.45e-07!604;UBERON:0006598!1.45e-07!604;UBERON:0002532!1.45e-07!604;UBERON:0000062!1.48e-07!511;UBERON:0000479!3.14e-07!787;UBERON:0000481!4.54e-07!347;UBERON:0000922!5.16e-07!612;UBERON:0004122!6.97e-07!15;UBERON:0000467!8.04e-07!625 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;2.03e-14;14!UBERON:0004457;1.18e-10;9!UBERON:0000042;1.18e-10;9!UBERON:0003688;6.54e-10;6!UBERON:0002358;6.54e-10;6!UBERON:0003684;6.54e-10;6!UBERON:0001178;6.54e-10;6!UBERON:0002107;1.60e-07;19!UBERON:0006925;1.60e-07;19!UBERON:0002368;3.38e-07;33!UBERON:0002423;3.62e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001013,2.33e-14,14;UBERON:0003688,4.48e-10,6;UBERON:0002358,4.48e-10,6;UBERON:0003684,4.48e-10,6;UBERON:0001178,4.48e-10,6;UBERON:0002530,9.58e-10,59;UBERON:0002100,9.06e-09,199;UBERON:0003929,1.42e-08,54;UBERON:0002107,1.13e-07,19;UBERON:0006925,1.13e-07,19;UBERON:0008836,1.13e-07,19;UBERON:0004122,1.16e-07,15;UBERON:0004457,1.58e-07,12;UBERON:0000042,1.58e-07,12;UBERON:0008835,1.97e-07,22;UBERON:0003894,1.97e-07,22;UBERON:0009497,3.20e-07,25;UBERON:0000015,3.20e-07,25;UBERON:0002423,3.20e-07,25;UBERON:0006235,3.20e-07,25;UBERON:0004161,3.20e-07,25;UBERON:0002368,3.73e-07,35;UBERON:0005256,4.82e-07,122;UBERON:0004921,5.11e-07,118;UBERON:0009854,5.54e-07,23;UBERON:0001007,7.49e-07,145;UBERON:0001555,7.49e-07,145;UBERON:0007026,7.49e-07,145;UBERON:0003104,8.27e-07,160;UBERON:0009142,8.27e-07,160;UBERON:0000162,9.11e-07,14;UBERON:0001353,9.11e-07,14;UBERON:0000163,9.11e-07,14;UBERON:0006866,9.11e-07,14;UBERON:0000164,9.11e-07,14;UBERON:0000931,9.11e-07,14 | |||
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| |||
|short_description=p5@MGST1 | |||
}} |
Revision as of 21:59, 10 September 2013
Short description: | p5@MGST1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_MGST1_5end |
Coexpression cluster: | NA |
Association with transcript: | -10bp_to_ENST00000010404, ENST00000536371, NM_145792, uc001rdf.2_5end |
EntrezGene: | MGST1 |
HGNC: | 7061 |
UniProt: | P10620F5H7F6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 1.69e-24 | 15 |
hepatocyte | 4.52e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
adipose tissue | 2.33e-14 | 14 |
omentum | 4.48e-10 | 6 |
peritoneum | 4.48e-10 | 6 |
abdominal cavity | 4.48e-10 | 6 |
visceral peritoneum | 4.48e-10 | 6 |
gland | 9.58e-10 | 59 |
trunk | 9.06e-09 | 199 |
gut epithelium | 1.42e-08 | 54 |
liver | 1.13e-07 | 19 |
digestive gland | 1.13e-07 | 19 |
liver bud | 1.13e-07 | 19 |
genitourinary system | 1.16e-07 | 15 |
cavity lining | 1.58e-07 | 12 |
serous membrane | 1.58e-07 | 12 |
hepatic diverticulum | 1.97e-07 | 22 |
liver primordium | 1.97e-07 | 22 |
epithelium of foregut-midgut junction | 3.20e-07 | 25 |
anatomical boundary | 3.20e-07 | 25 |
hepatobiliary system | 3.20e-07 | 25 |
foregut-midgut junction | 3.20e-07 | 25 |
septum transversum | 3.20e-07 | 25 |
endocrine gland | 3.73e-07 | 35 |
trunk mesenchyme | 4.82e-07 | 122 |
subdivision of digestive tract | 5.11e-07 | 118 |
digestive tract diverticulum | 5.54e-07 | 23 |
digestive system | 7.49e-07 | 145 |
digestive tract | 7.49e-07 | 145 |
primitive gut | 7.49e-07 | 145 |
mesenchyme | 8.27e-07 | 160 |
entire embryonic mesenchyme | 8.27e-07 | 160 |
cloaca | 9.11e-07 | 14 |
anal region | 9.11e-07 | 14 |
embryonic cloaca | 9.11e-07 | 14 |
terminal part of digestive tract | 9.11e-07 | 14 |
primitive urogenital sinus | 9.11e-07 | 14 |
proctodeum | 9.11e-07 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.